Candidatus Thiocaldithrix dubininis: QJT80_08435
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Entry
QJT80_08435 CDS
T09759
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdu03032
]
QJT80_08435
03036 Chromosome and associated proteins [BR:
tdu03036
]
QJT80_08435
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_08435
DNA replication proteins [BR:
tdu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QJT80_08435
Chromosome and associated proteins [BR:
tdu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QJT80_08435
DNA repair and recombination proteins [BR:
tdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QJT80_08435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WGZ89537
UniProt:
A0AA95KIR6
LinkDB
All DBs
Position
complement(1814072..1814377)
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AA seq
101 aa
AA seq
DB search
MTKSEIIDILSRKQSHLSSRDVELSVKMLLDKMSETLSDGGRIEIRGFGSFSLHHRAARK
GRNPKTGDQVALPPKHVPHFKPGKELRERVNESRATHPIQD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaaatcattgatatcttatcccggaaacaaagtcatttaagcagtcgg
gatgttgaactctctgtcaagatgttattggacaagatgagcgaaacactgtcagatggt
gggcgtattgaaattcgtgggtttggtagcttttcgttgcatcatcgtgctgcacgcaaa
gggcgtaatcccaaaactggcgatcaagtggccttaccaccgaagcatgtaccgcatttt
aaaccggggaaagaactgcgcgaacgcgttaatgaatcacgggctacccatcccattcaa
gattaa
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