Candidatus Thiocaldithrix dubininis: QJT80_08440
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Entry
QJT80_08440 CDS
T09759
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
QJT80_08440 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tdu03011
]
QJT80_08440 (rpsA)
Ribosome [BR:
tdu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
QJT80_08440 (rpsA)
Bacteria
QJT80_08440 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_PDCD11
Spt6_S1
GCS
CsrA
Motif
Other DBs
NCBI-ProteinID:
WGZ89538
UniProt:
A0AA95KJ42
LinkDB
All DBs
Position
complement(1814466..1816133)
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AA seq
555 aa
AA seq
DB search
MTESFAELFEESLSYTQMQPGALLNATVLEVRPDFVIVSAGLKSEGVIPAEQFKNERGEI
TVRVGDLVEVALDTVEDGFGETRLSREKARRLRAWEILEEAFNNDEIVTGIITGKVKGGF
VVELSDIRAFLPGSLVDVRPVRDTAYLENKELEFKLIKLDQKRNNVVVSRRAVVEEEYSA
EREALMENLQEGQVVKGVVKNLTDYGAFLDLGGIDGLLHITDMAWKRVKHPSEVVSIGDE
IEVKVLKFDRDKNRVSLGLKQLGEDPWQDLVRRYPAGTRIFGKVSNLTDYGCFVEIEDGV
EGLVHVSEMDWTNKNVNPAKVVTLGDEVEVMILDIDADRRRISLGMKQCQPNPWDEFANS
HNKGDRVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVPGEEAVRSYKKGDEVDAVVL
AVDPERERISLGIKQLEQDPFSNFVASHSKGSVVKGTVVEVTAKSAKIDLGDGIEGILRA
SELSRDRVEDARSLLKEGDAIEAKFMGVDRKTRSINLSIKAKDDDDEARVMREYTGRSNG
ASTSLGDIFKEQMGE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagttttgccgaactgtttgaagagagcctgtcttatacccaaatgcaaccg
ggcgctctgttaaacgcaacagttctagaagtgcgccctgatttcgttattgtaagtgct
ggtttgaaatcggaaggcgttattcctgccgagcaattcaaaaatgaacgtggtgaaatc
actgtacgcgtcggtgatttagttgaagtggcgctggataccgtagaagacggtttcggt
gaaactcgtttatcacgtgaaaaagcacgtcgcttacgtgcatgggaaattttagaagaa
gccttcaataacgacgaaatcgtaaccggtattattacaggtaaagtgaaaggcggcttc
gtggttgaactcagtgacatccgcgctttcttaccgggttctttagtcgatgtacgtcca
gtgcgtgatactgcgtacttagaaaataaagaacttgagttcaaactgattaaattagac
caaaaacgtaataacgttgtggtttctcgtcgcgctgtggttgaagaagaatacagtgca
gaacgtgaagcgctcatggaaaatctgcaagaaggtcaagtggttaaaggtgtggttaaa
aacctcactgactacggtgcgttcttggatctgggcggcattgacggcttgttacacatt
actgatatggcttggaaacgggttaaacatccgtctgaagtggttagcatcggtgatgaa
atcgaagttaaggtacttaaattcgaccgcgataaaaaccgcgtatctctgggcttgaaa
caattgggtgaagacccgtggcaagatctggtacgtcgttacccagcgggcactcgtatt
ttcggtaaagtaagcaacttaacggattacggctgctttgtggaaatcgaagatggcgtt
gaaggtttagtacacgtttctgaaatggattggactaacaaaaacgttaatccagctaag
gttgttaccttaggggatgaagttgaagttatgatcctcgacattgatgcagatcgccgt
cgtatctcattaggcatgaaacaatgtcagcctaacccatgggatgagttcgcgaattcg
cataacaaaggcgaccgcgtttctggcaaaatcaaatctattactgacttcggtatcttt
atcggcttagatggcggtattgatggcttagttcatttgtcagatatttcttggaatgta
ccgggcgaagaagccgttcgttcttataagaaaggtgatgaagttgacgcagtcgtatta
gcggttgatccagagcgtgaacgtatctctttaggtattaaacagttagaacaagatccg
ttctctaactttgttgcttcacatagtaaaggcagcgtcgttaaagggactgtggttgaa
gtaactgcgaaatcagccaaaattgatttaggcgatggtatcgaaggtatcttacgcgct
tctgaattatcacgcgaccgcgttgaagatgcgcgtagtctgttaaaagaaggcgatgcc
attgaagctaaattcatgggtgttgaccgcaaaactcgctctatcaacttgtcgatcaaa
gcgaaagacgatgatgatgaagcacgtgttatgcgtgagtacaccggtcgctcaaacggt
gcatctacttcattaggtgacatcttcaaagagcaaatgggcgaataa
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