KEGG   Candidatus Thiocaldithrix dubininis: QJT80_08740
Entry
QJT80_08740       CDS       T09759                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tdu  Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:tdu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tdu02048]
    QJT80_08740
Enzymes [BR:tdu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     QJT80_08740
Prokaryotic defense system [BR:tdu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   QJT80_08740
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 bHLH_HIF1A
Other DBs
NCBI-ProteinID: WGZ89595
UniProt: A0AA95KGF9
LinkDB
Position
1871932..1875030
AA seq 1032 aa
MNDYKTIAESNNFIVLDKYAKCLQVSETYQSEYDLEREFIDDLQQQGYDYLPKLNNPEAM
LANVREQLQTLNSMQFAEGEWRRFVEAYLDKPSEGMLDKTRKIHDDYIHDFVFDDGHIQN
IYLLDKKNIARNKVQVIKQFEQKGTQANRYDVTILVNGLPLVQVELKKRGVAIREAFNQV
HRYSKESFNTEHSLFKYLQLFVISNGTDTRYFANTTQRNKNSFDFTMNWARADNSLIRDL
KDFTATFFQKNTLLNVLLHYSVFDVSNTLLVMRPYQIAATERILWKINSSYQAKHWSKIE
SGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG
SDSTAGLKRNLEKDDNKIIVTTIQKLNNLIKSEGDLPIYNQQVVFIFDECHRSQFGEAQK
NLKKKFKKFYQFGFTGTPIFPQNALGAETTASVFGRELHAYVITDAIRDEKVLKFKVDYN
DVRPQFKAAETEQDEQKLNAAETKQALLHPERIREIAQYILHNFRQKTHRLQAGGKGFNA
MLAVSSVDAAKLYYETYKQLQKDSPKPLKIATIFSFAANEEQDAVGDIQDESFDVSAMNS
SAKEFLSAAIADYNTYFKTNFGVESNGFQNYYRDLALRVKNQEIDLLIVVGMFLTGFDAP
TLNTLFVDKNLRYHGLIQAYSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGDKNTKN
VVLEKSYQEYMQGFTDGASGEARRGFIEVSEELAQRFPNPDEIVTEADKKAFVKLFGEYL
KVEHVLQNYDEFASLKALQNLDLSDATAVETFKAEHYLSDEQLAALQTVQMPTERSIQDY
RSTYNDIRDWLRREKSATEKATSSIDWDDVVFEVDLLKSQEINLDYILELIFEHNKQNKT
KAELIEEVRRLIRASLGNRAKEGLLVDFINQSNLDAMLDKASIIDAFFQFAQTEQGREVE
ELIRAENLNVEAAKRYISASLKREYASENGTELNETLPKMSPLNPHYKTKKQSVFQKIAA
FVEKFKGVGGQL
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgaacgactacaaaaccattgccgaatccaataactttatcgtgctggataaatacgcc
aagtgtttacaagtcagtgagacttatcaaagcgaatatgatttagagcgcgagttcatc
gacgatttacaacaacaaggttacgactacctacccaagcttaataaccccgaagcgatg
ctggccaatgtgcgcgaacagttgcaaaccttgaattccatgcaatttgccgagggtgaa
tggcggcgttttgtcgaggcttatttggacaagcctagtgagggcatgcttgataaaaca
cgcaaaattcatgatgactatattcacgattttgtgtttgatgatgggcatattcagaac
atctacttgcttgataaaaaaaacattgcgcgtaataaagtgcaggttatcaaacagttt
gaacaaaaaggcacacaagctaatcgttatgatgtgaccattttggtgaatggtttaccg
ctggtacaagtcgagctaaaaaaacgcggggttgccattcgtgaagcgtttaatcaagta
caccgctatagcaaagagagttttaataccgagcattcgttatttaagtatttgcaatta
tttgtaattagcaatggcacggatacgcgctattttgccaataccacccaacgcaataaa
aatagctttgatttcaccatgaattgggcgcgagccgacaatagcctgattcgagattta
aaagactttaccgcgactttctttcagaaaaacacgctactcaatgtattgctgcattat
tcggtgtttgatgttagcaatactttactggtgatgcgtccgtatcaaatcgcggccacc
gaacgcattttgtggaagatcaacagcagctaccaagcgaaacactggagcaaaattgaa
agcggcggttatatttggcataccacagggtcgggtaaaaccctaaccagttttaaagcg
gcacgtttagccacagagctggattttatcgacaaagtgttttttgtggtggatcgcaaa
gaccttgattatcagaccatgaaggaataccaacgcttttcacccgatagcgttaatggt
tcggatagtactgctggtttaaagcgcaatctggaaaaagacgataataagatcattgtc
accaccattcagaagctcaataacctgatcaaaagtgaaggcgacttgccgatttataac
cagcaagtggtgtttatttttgatgaatgccaccgcagccagtttggtgaagcgcaaaaa
aacctgaagaagaagtttaaaaagttctatcagtttggttttaccggcacgccgattttc
ccacaaaacgctttgggtgcagaaaccacggccagcgtatttgggcgtgaactgcatgcc
tatgtgatcacggatgcgattcgcgatgaaaaggtgttgaagttcaaggtggattacaac
gatgtgcgtccgcagtttaaagcagccgaaaccgagcaggacgaacaaaaactcaatgca
gccgaaaccaagcaagcgttattgcaccctgagcggattcgagaaatagcgcagtatatt
ttgcacaacttccgccagaaaacgcatcgcttgcaagcaggcggcaaaggctttaatgcc
atgttggcagtgagtagtgtggacgctgccaagctgtattacgaaacctacaaacaactg
caaaaagacagccctaagccactgaaaatcgccaccatcttttcatttgccgccaatgaa
gaacaagatgcggtaggcgatattcaggatgaaagctttgatgtttcggctatgaatagc
agtgctaaagagtttttgagtgccgctattgcggattacaacacttactttaaaaccaat
tttggtgtggagagcaatggctttcagaactactaccgcgaccttgcgctacgagtcaaa
aatcaagaaatcgacttgctgattgtggtggggatgttcctaacagggtttgatgcgccc
acgctcaacaccttgtttgtggataagaacttgcgctatcacggtttaatccaagcctat
tcccgcaccaatcgtatttatgatgccaccaaaacctttggcaatatcgtgacctttcgg
gatttagaacaagcgacgattgatgcaattaccttgttcggcgataaaaacaccaaaaac
gtggtgctcgaaaaaagttatcaagaatacatgcaaggctttaccgatggggcaagcggt
gaagcacgacgcggttttatcgaggtcagtgaggaattagcacaacgctttcctaacccc
gatgagattgtgaccgaagctgataaaaaagcttttgtgaaactgtttggcgagtatttg
aaggtagagcatgtgctgcaaaactacgatgagtttgcgagtttaaaagctttgcaaaat
cttgatctaagcgatgcaaccgccgttgaaacctttaaagccgagcattatttaagtgat
gagcaattagccgccttacaaaccgtccagatgccgactgaacgtagtattcaggattac
cgttctacctacaacgatattcgggattggctacgccgtgaaaaatccgctaccgaaaaa
gcaacatccagtatcgactgggatgatgtggtgtttgaggttgacttgctgaaatcgcag
gagatcaatcttgattacattctggaactcatttttgaacacaataagcagaataaaact
aaagctgaattgattgaagaagtacgccgtttgattcgggcaagtctaggcaatcgggcg
aaagagggtttgttggttgattttattaatcaaagcaatctggatgccatgctggataaa
gccagtattattgatgcgtttttccaatttgcccaaaccgaacaaggccgtgaagtggaa
gaactcattcgtgcagaaaatttgaatgttgaagccgccaagcgttatatcagtgcttca
cttaaacgggaatacgccagcgaaaacggcactgagttgaatgaaacattgcctaaaatg
agtccgctgaatccgcactataaaactaaaaagcagagtgtttttcagaaaattgcggcg
tttgtagagaaatttaagggtgtgggcggacaactttaa

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