Candidatus Thiocaldithrix dubininis: QJT80_08875
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Entry
QJT80_08875 CDS
T09759
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00540
Lipopolysaccharide biosynthesis
tdu01100
Metabolic pathways
Module
tdu_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QJT80_08875 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tdu01005
]
QJT80_08875 (waaA)
Enzymes [BR:
tdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
QJT80_08875 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
QJT80_08875 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
QJT80_08875 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
QJT80_08875 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
tdu01005
]
Lipid A
QJT80_08875 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
WGZ89617
UniProt:
A0AA95H1E4
LinkDB
All DBs
Position
complement(1909498..1910772)
Genome browser
AA seq
424 aa
AA seq
DB search
MPISQVLYTGLMYLLTPLFLLRLYWKGRLNPAYRQRIRERLGWVTPSNQASIWVHAVSVG
ETMAAKPLVDALLMHYPDKTVWLTSTTPTGSATVQRLWGERVRHSYCPYDLPDALQRFIK
RSQPQLCIILETEIWPNLFYACQHHQIPLLMANACLSERSLIGYRKVHRLIKTTLNRATK
IMTRSAVDATRLTSLGVLPEKLKVCGNLKFELTIPESLDAQTQALRASLQGRRIWVAAST
HSGEDDIILDAFQGLYAQYPDVLLILVPRHPERFASVAQLCEQSGLTWQRRSQHTAITAQ
TAILLGDTMGELLLWYAIADLALIGNSLLAPGGGHNPLEAAAFAVPILTGRYTQNFVDMY
PALVAQNAALVVSDKEALLTCLHEWMREPLAYYQKGQAARRFFEQNQGALACILVEINQV
LAAR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttcacaagttttatatacggggttaatgtatttattaaccccgcttttttta
ttacgtttgtattggaaagggcggctgaatcctgcttatcgccagcggattcgtgaacgc
ttgggttgggtaacgcccagtaatcaagctagtatttgggtacatgcggtgtccgtgggc
gaaacaatggcggcaaagcctttggttgatgccttattaatgcattatccggataaaacc
gtgtggctcactagtactacacccactgggtcggcaaccgtacaacgcttgtggggcgag
cgcgttagacatagctattgcccttatgatttgccagatgccttacaacgttttattaaa
cgtagccaaccacagctttgtattattttagaaacggaaatctggccgaatttattttat
gcctgtcaacaccatcaaattccgctactcatggcgaatgcctgtttatccgagcgctca
ttaataggttatcggaaagtgcatcggctcattaaaaccactttaaaccgcgctacaaaa
ataatgacgcgtagtgcggtcgatgctacacgtttgacaagtttaggcgtattgccagaa
aagttaaaagtctgtggcaatcttaaatttgaactaacaattccagaatcgctagatgct
caaacacaagcgcttagagccagtttgcaagggcgtagaatttgggtagcggccagtacg
catagcggcgaagatgatattattttggatgctttccaaggtttatacgcacaatatccc
gacgttttattgattttagtaccgcgtcacccagaacgttttgccagcgtcgcccagtta
tgtgagcaaagcggtttaacttggcaacgtcgtagtcagcacacagcaattacagcacag
actgcaattttattaggcgatactatgggggaattattactgtggtacgccattgcagat
ttagccttgattggtaatagcttgctcgcgcccggtggcggacataatccgttagaggca
gccgcttttgctgtaccgattttaacgggtcgttatacgcagaactttgttgatatgtat
ccggcgttagtggcacaaaacgccgctctagttgtgtctgataaagaggcgctattaacc
tgtttacacgagtggatgcgcgagccacttgcctattatcaaaaaggacaagccgctagg
cgattttttgagcaaaatcaaggcgcattagcttgtatactcgttgaaattaatcaggtt
ttagcagcgaggtag
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