Candidatus Thiocaldithrix dubininis: QJT80_09510
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Entry
QJT80_09510 CDS
T09759
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00550
Peptidoglycan biosynthesis
tdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QJT80_09510 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tdu01003
]
QJT80_09510 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tdu01011
]
QJT80_09510 (mrcB)
Enzymes [BR:
tdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QJT80_09510 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QJT80_09510 (mrcB)
Glycosyltransferases [BR:
tdu01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QJT80_09510 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
tdu01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QJT80_09510 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Myosin-VI_CBD
Motif
Other DBs
NCBI-ProteinID:
WGZ89739
UniProt:
A0AA95H622
LinkDB
All DBs
Position
complement(2034940..2037459)
Genome browser
AA seq
839 aa
AA seq
DB search
MNQNTAQGSKQDAWWMLPWRGLRFFFSLFGRLSRILILVALILGGLVFVVYAMQLDEEVT
AQFEGKRWALPARVFARPLDLYEGQGLLADHLEQELKLLSYRKLDNPTETGQYTRKGDQF
MINTRGFQFAEDVEPPRSIKIKVNNGKVTSLGYSDGKNPLNLMRLEPVLIGNFYPKHNED
RILVRQKDVPPELVKGLVSVEDKKFYEHQGVNPMAIARAMVENLKAGHTVQGGSTLTQQL
VKNFYLTNERSWRRKVKEIMMASLLELHYNKQEILEAYLNEIHLGQDGDRAIHGFGLAAQ
FYFNQPAKELKPEQMALLIGLAKGAGYYDPRRFPERALERRNVVLSVMQQEKVITPEQYQ
VAIQQPLGVSEHKPSGASPFPAYLDLVRQQLQRDYKEDDVRSEGLLIFTAMDPIVQLTAE
TILQNRVKRLEKAYKISRGKLNGATMISTVQGAEVLALVGGMNVRYPGFNHILTAQRQIG
SLVKPAIYLTALENKRKYTLATRVSDGPVTVKIGPKKYWQPENYDRRNMGVVTVLKALEM
SRNTPAVRIGVDMGVDRVVSTLHLLGINAKIPEYPSILLGAVELTPFEVQQMYQTIAAGG
SYTPLKAIRSVMNLKGQVLSRYPVNVQQVASPEAVDLLQYGLNQVTEQGTAKELSSVLPA
WKKVGGKTGTTNDKKDSWFAGFSGQHVATVWVGRDDNKPIHMTGGEGALKVWADLFRVLP
SKALQVQNSSRLVWVDIDSDTGLRFNPACGKAERVPFIKGSQPQKTNFCAPPVDETLPEG
AVPVEGQAAPTEATAPVARANPTPAPARAPAARPAPPAVPAGNNASTPPDNSWIDTLMR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcagaacacagctcagggatcaaaacaggatgcgtggtggatgctgccttggcga
ggtctacgctttttctttagcctgtttggtcggctctctcgtattcttattttggtggct
ttaattttaggtggtctagtgtttgtggtgtatgccatgcaactagatgaagaagtaacc
gcacaatttgaagggaaacgttgggcattaccggctcgtgtgtttgcacgtcccttagat
ttatatgaagggcaaggcttgctggcggatcatttagagcaagaattaaagttactgagt
tatcgtaaattagacaatccgacggaaaccgggcagtacacgcgcaaaggtgatcaattt
atgattaatacgcgtggcttccaatttgcggaagacgttgaaccgccacgtagtattaaa
attaaagttaacaatggcaaagtgacatcattgggttattcagatggtaaaaatccactg
aatttaatgcgcttagagccggtgctaattggtaatttttatcctaagcataatgaagat
cgtattttagttcggcaaaaggatgtaccgccagaattggttaaaggtttggtatcggtc
gaagataaaaaattctacgagcaccaaggcgtgaatccaatggcgatagcgcgcgcgatg
gtggaaaacttaaaagcagggcataccgtgcaaggcggtagtaccttaacccaacagttg
gtaaaaaacttttatttaaccaatgaacgcagttggcggcgtaaagttaaggaaataatg
atggcttctttattggagctgcattacaacaagcaagaaattttagaagcttatctgaat
gaaattcatttagggcaagatggtgatcgagcgattcacggctttggtttagccgcacag
ttttatttcaatcaacctgccaaagagttaaaacctgaacaaatggctttgttgattggt
ttagccaaaggcgcaggttattacgatccgcgacgttttcctgaacgtgccttagaacgg
cgtaatgtggtgctgtcggtaatgcagcaggaaaaggtaattaccccagaacaatatcaa
gtagctattcaacaacctttaggcgttagcgaacataaaccttcaggggcaagccccttt
cctgcctatttagatctcgtgcgccaacaattacaacgcgactataaagaagatgatgtg
cgtagcgaaggtttattgatctttacagcgatggatcccatcgtgcaattaactgccgaa
actattctgcaaaatcgggttaagcgtttagaaaaagcgtataaaatttcgcgtggtaag
ctgaatggggcaaccatgattagcacggtacaaggcgctgaggttttagctttagtcggc
ggtatgaatgtgcgttatccgggctttaatcatattctaacggcacaacgtcaaatcggc
tctttagtcaaaccggctatttatttaaccgcattggaaaataagcgtaagtatacctta
gccacacgtgtgagtgatggaccggtaactgtcaaaattggtcctaaaaaatattggcag
cctgagaactacgaccgtcgcaatatgggcgtggtaacggttttgaaagcgttggaaatg
tcgcgtaatacgcccgctgtccgcattggggtggatatgggggttgatcgtgtcgtgagt
accctacacttgttgggcattaatgccaaaattccagaatacccgtcgattctactaggg
gcggttgaattaaccccatttgaagtgcagcagatgtatcaaaccattgcggcgggtggt
tcttatacgcctttaaaagccattcgtagtgtcatgaatcttaaaggacaagtgttaagc
cgttatccggtgaatgtgcagcaagtagcaagccccgaagcggtggatttattacaatac
ggcttaaatcaagtaacggagcaggggacggcaaaagaattgtctagcgtgttaccagca
tggaaaaaggtgggcggtaaaacaggtacaaccaatgataaaaaagacagttggtttgca
ggtttttcgggacaacatgtggcgacggtttgggttgggcgcgatgacaataaacccatt
catatgacaggtggcgaaggtgctttaaaagtgtgggcggatttattccgtgtattaccc
agcaaagcactgcaagtccaaaattcatcacgcttagtctgggtcgatatcgattctgac
acaggtttacgtttcaatccggcttgtggcaaagccgagcgagtgccgtttattaaaggc
agtcaaccgcaaaaaactaacttctgtgcgccgcctgtggacgaaaccttacctgaaggt
gctgttccagtagaaggtcaagcggctcccacagaagctactgcgcctgtagctagagct
aatcctacacctgctccggcacgcgcgcctgcggcgagacctgctccgccagcagtaccc
gctggtaataatgccagtacgccaccagataactcgtggattgatactttaatgcgataa
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