Candidatus Thiocaldithrix dubininis: QJT80_09550
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Entry
QJT80_09550 CDS
T09759
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00230
Purine metabolism
tdu00270
Cysteine and methionine metabolism
tdu01100
Metabolic pathways
tdu01232
Nucleotide metabolism
Module
tdu_M00958
Adenine ribonucleotide degradation, AMP => Urate
tdu_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
QJT80_09550 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
QJT80_09550 (pgeF)
Enzymes [BR:
tdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
QJT80_09550 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
QJT80_09550 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
QJT80_09550 (pgeF)
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Gene cluster
GFIT
Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
WGZ89746
UniProt:
A0AA95KDS2
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All DBs
Position
complement(2048464..2049201)
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AA seq
245 aa
AA seq
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MKFDWIIPNWAAPANVKAVCTTRSGGVSLAPFESLNLGNHVGDDPYAVARNRLLVGDILN
LPTEPLWLQQVHGTDVCGMGAVSCYPTADASVALQKAQVCVVMTADCLPVLFCDQAGTKA
GAAHAGWRGLQAGVLERTVQALQTEPRELMAWLGPAIGATAFEVGEEVRHAFMQSDAAAE
AAFKPSSNAGKWLADIYLLARQRLQGLGVTQISGGDYCTYSDTERFFSYRRDGQTGRMGS
FIWLE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgattggatcatcccgaattgggccgcgcctgccaacgtgaaagcagtttgt
acaacacgtagcggcggtgtgagtctagcgccgtttgagagtttaaatttgggcaatcat
gtgggtgatgacccgtatgcggtggcgcggaatcgtttgttagtcggggatattttaaat
ctgccaaccgagccgttgtggttgcagcaagttcacggtacggatgtgtgcggtatgggt
gcggtttcttgttatccaacggcggatgcgtcggtggcgttacagaaggcgcaggtgtgt
gtggtgatgacggcggattgtttgcctgtattattttgtgatcaggcgggaacaaaagcc
ggtgcggcgcatgcgggttggcgtggcttacaggcgggcgtattagaacgcacggtgcag
gctttgcaaactgaaccccgtgagttaatggcgtggttgggtcctgctattggggcgact
gcgtttgaggtgggtgaggaagtgcgccacgcgtttatgcagtctgatgcggcagcagaa
gcggcatttaagccatcaagcaatgcggggaaatggttggcggatatttatctgttggcg
cggcaacgtttgcagggattgggggttacgcaaattagcggcggggattattgcacttat
tcagatactgaacgtttcttttcttatcggcgtgacgggcaaaccggacgtatggggagc
tttatttggttggaataa
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