Candidatus Thiocaldithrix dubininis: QJT80_09555
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Entry
QJT80_09555 CDS
T09759
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00260
Glycine, serine and threonine metabolism
tdu00630
Glyoxylate and dicarboxylate metabolism
tdu00670
One carbon pool by folate
tdu00785
Lipoic acid metabolism
tdu01100
Metabolic pathways
tdu01110
Biosynthesis of secondary metabolites
tdu01200
Carbon metabolism
Module
tdu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QJT80_09555 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QJT80_09555 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QJT80_09555 (gcvP)
00670 One carbon pool by folate
QJT80_09555 (gcvP)
Enzymes [BR:
tdu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QJT80_09555 (gcvP)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Glyco_hydro_42M
Motif
Other DBs
NCBI-ProteinID:
WGZ89747
UniProt:
A0AA95KIY5
LinkDB
All DBs
Position
complement(2049367..2052243)
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AA seq
958 aa
AA seq
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MTTLSQLEQRDDFITRHIGPNAADSQAMLASVGAASLDDLISSTVPTAILSNAPLALAPS
STEAEALNTLKQLAKQNIVAKSYIGTGYYDTLVPPVILRNVLENPGWYTAYTPYQPEISQ
GRLEALLNYQQMITDLTGMDIANASLLDEATAAAEAMTLCKRSNKLKSDRFFVADDVHPQ
TIDVIKTRAEYFGFELVIAPAAELAQHEVFGALVQYPSTTGEIIDLAAFIQQAHAQKALV
CVASDLMALVQLTPPGELGADVVVGNSQRFGVPMGFGGPHAAFFATKDAFKRTMPGRVIG
VSIDSHGKPALRMAMQTREQHIRREKATSNICTAQALLANMAGFYAVYHGAEGLKKIAGR
IHRLTNILAKGLQSKGYTLAHATWFDTLTVVVGDKQQALYELALQANLNLRKLGNDRLGI
SLDERKTRADIAELFDILIGDQHGLDIEALDQAVITENVSGIPAAYQRQSAFLTHPVFNS
HHSESEMLRYLKRLENKDFSLTHGMIPLGSCTMKLNATSEMMPITWPEFADIHPFAPNAQ
TIGYRAMIQELEDWLIEVTGYDAISMQPNSGAQGEYAGLVAIRRYQASIGQAHRDVCLIP
SSAHGTNPASAAMVNLKVVVVDCDANGNVDIADLRAKAEKHQANLSCLMVTYPSTHGVFE
QEIVEICKIVHDFGGQVYMDGANMNAQVGLSKPGKFGSDVSHLNLHKTFAIPHGGGGPGM
GPIGVKAHLTPFLSSNVENPPFDGKQGNSAISAAPYGSGAILPISWMYIKMMGGNGLKQA
TEMAILNANYIMQRLADYYPVLYRGKNGRVAHECIIDIRPLKAASGIDESDIAKRLMDYG
FHAPTMSFPVAGTLMIEPTESEPKEELDRFCDAMIAIREEIQKVQDGVWAADNNPLVNAP
HTLDDLTQTWQRPYSQSEAVFPKGVMPSAKYWPTVNRIDNVYGDRNLVCSCPSVESYR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttatcccagctcgaacaacgagacgactttattacgcgccatattggcccg
aatgccgctgatagccaagcgatgttagctagcgtgggcgcagcgtctttagacgattta
attagcagtactgttcccaccgctattttaagtaatgcgccgttagcgttagcgcctagt
agcaccgaagccgaggctttaaacacgctcaagcaattagccaaacaaaatattgtggca
aaatcttatattggtacgggctattacgacacgcttgtaccgcctgtgattttacgcaat
gtgttggaaaatccgggttggtataccgcttatacgccgtatcagccggaaatttcccaa
gggcgtttggaagctttgttgaattatcaacaaatgattaccgatttaaccggcatggat
atcgccaatgcgtcgctattggatgaagccactgccgccgccgaagccatgaccctatgt
aagcgttccaataagcttaaatcagacaggttctttgtcgccgacgatgtgcatccgcaa
actatcgacgtgattaaaactcgcgctgagtactttgggtttgaattagtgattgcacct
gccgctgaactagctcaacacgaagtgtttggcgcattagtgcaatacccgagcaccact
ggcgaaatcatagatttggcggctttcattcaacaagcgcatgcgcaaaaagccttagtg
tgtgtggcaagcgatttaatggcgttagtgcaattgacacccccgggtgaattaggcgca
gatgtagtggtgggtaattcacaacgctttggcgtacccatgggctttggtgggccacat
gcggcattctttgccacgaaagatgctttcaaacgcacgatgccggggcgcgtgattggc
gtgtcgattgatagccacggcaagcccgccttacgtatggcgatgcaaacccgtgaacaa
catattcgccgcgaaaaagctacttctaatatttgtaccgcccaagccttattagcgaat
atggcaggtttttacgcggtgtatcacggcgcggaaggcttgaaaaaaattgccggacgt
attcaccgcttaaccaacattctggctaagggtctgcaaagtaaaggctatacgctggcg
catgctacgtggtttgacaccttaaccgtggtggtgggtgataaacagcaggctttatat
gagcttgccttacaagccaacctgaatttgcgcaaactgggcaatgaccgcttaggcatt
agcttggatgaacgtaaaacccgggcggatattgccgaactgtttgatattttaattggt
gatcagcacggcttggatattgaagccttagatcaggcggtgattaccgaaaatgtttca
ggtattcccgctgcttaccaacgccaaagcgcgttcttaacgcatccagtgtttaattcg
catcattccgaatcagaaatgctgcgctatctgaaacgtctagaaaataaggatttttcc
ttaacgcatggcatgattccgctgggttcatgcaccatgaaattaaacgctacttcagaa
atgatgccgattacgtggccggaatttgcggatattcacccatttgcgccgaatgcccaa
accattggctatcgtgccatgattcaagaattggaagattggctgattgaagtcacgggc
tatgatgcgatttctatgcagccgaattcgggggcgcaaggcgagtacgcaggcttagtg
gcgattcgtcgttatcaagccagcatcgggcaagcgcatcgggatgtatgcttaattcct
agttctgcgcacggtacaaatcccgcctctgctgcaatggttaacttaaaagtcgtggtg
gtggattgtgacgcaaacggcaatgtggatattgccgatttacgcgccaaagccgaaaag
catcaagccaatctgtcttgtttgatggtgacttacccatccactcacggcgtattcgag
caagaaatcgtcgaaatctgcaaaatcgtgcatgattttggcgggcaagtttacatggac
ggcgcgaatatgaacgcgcaagtgggtttgtccaaaccgggcaaattcggctcagatgta
tcacacctcaatttacacaaaacctttgccattccacacggcggcggtggccctggtatg
ggacccatcggtgtaaaagcgcatctcaccccgttcttatccagcaatgtggaaaaccca
ccgtttgacggcaagcaaggcaatagcgcgatttctgctgcaccgtatggcagtggcgcg
attctgccaatctcgtggatgtatatcaaaatgatgggtggcaatggtttaaaacaagcc
accgaaatggctattctcaacgccaattacatcatgcaacgccttgctgactactatccg
gtgctgtatcgcggcaaaaatggacgcgttgcgcatgaatgtattatcgacattcgcccg
ttgaaagctgcgtctggcattgatgaatcggatattgccaagcgtttaatggattacggt
tttcacgcgcctaccatgtcgttccctgtcgcgggtacgctgatgattgaacccactgaa
tccgaaccgaaggaagaattggatcgtttctgcgatgcgatgattgcgattcgtgaagaa
attcaaaaggtgcaagatggcgtttgggcagcggataacaatccattggtgaatgcaccg
cataccttggacgatttaacccaaacttggcagcgtccgtattcacaaagcgaagccgtg
ttcccgaaaggcgttatgcctagcgcgaaatattggcccaccgtgaatcgtattgataac
gtctacggcgataggaatttggtttgttcttgtccgagcgtggagagttatcggtag
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