Candidatus Thiocaldithrix dubininis: QJT80_09980
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Entry
QJT80_09980 CDS
T09759
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_09980
Enzymes [BR:
tdu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QJT80_09980
DNA repair and recombination proteins [BR:
tdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QJT80_09980
Prokaryotic type
QJT80_09980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WGZ89830
UniProt:
A0AA95H4Y0
LinkDB
All DBs
Position
complement(2129057..2130466)
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AA seq
469 aa
AA seq
DB search
MITLVWLRQDLRLADNPALYAACRNSSQVILVFIDDPSPTSTSQLGAASRVWLQHSLQTF
QRSLIPFKQQLIIRQGQALSVLQALIRETGAQQVLWNRVYEPICLARDTQIKQALQAQCM
VKSFNASLLYEPWQVLKPDQTPYKVFTPYWKSVVSKGIVQALLPLPTQIPLPDSFPLSLS
LEALRLVPNLPWAQRMMAHWQVGEMAALQRLESFLAQMVQTYSQQRDFPAQDFTSRLSPH
LHFGEISPRQIAYYAQACLAHYPAAEQGVQAFLRELGWREFAYALLYHFPQTVTEPLDTR
FQRFQWNTVEPSTLARWQQGNTGYPIIDAGMRQLWQTGWMHNRVRMLVASFLTKNLLIPW
QIGEQWFRDTLVDADLANNVLGWQWTAGCGADAAPYFRLFNPMLQSQKFDANGAYIKQWC
PELSQRAASRIHFPRELGEAVMDYPLPLLDFKQSRELALSRFAQIKDST
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattacgctggtttggttacgtcaagatttacgtctagcagataatcccgcgctgtat
gcagcgtgtcgtaacagttcgcaagttattttggtttttattgatgaccccagccctacc
agtactagccaattaggggcagccagccgggtttggttacaacacagtctacaaactttc
caacgcagtttaataccgttcaaacaacaattgattattcgccaagggcaagccttaagc
gtcttacaagcgttaattcgggaaaccggtgcgcagcaagtgctatggaatcgagtgtat
gaacccatttgtttagcacgcgatacgcaaattaaacaagccctgcaagcgcaatgtatg
gtgaaaagctttaatgccagtttgttatacgaaccttggcaagtcttaaagcctgatcaa
accccgtataaagtgtttacgccgtattggaaaagtgttgtcagcaaaggcattgtgcaa
gcactgctaccactacctacacaaattcccttaccggacagctttccactaagtttaagt
ttagaggcattgcgcttagtgcctaatttgccgtgggcgcagcgcatgatggcgcattgg
caagtgggagaaatggctgctttacaacgtttggaaagcttcttagcacagatggtgcaa
acgtatagccaacagcgtgattttccagcgcaagattttacatcgcgtttatcaccgcat
ttgcattttggtgaaatcagtccacggcaaattgcttattatgcgcaagcttgcctcgcg
cactatccagcggcagaacaaggcgttcaagcatttttacgggaattgggttggcgtgaa
tttgcctatgcgttgttgtatcactttccgcaaacggtaactgagccattagatacacgc
tttcagcgctttcaatggaatacggttgaaccaagcaccttagcgcgttggcagcaaggc
aacaccggctatccgataattgacgcgggtatgcggcaattgtggcaaaccggctggatg
cataatcgcgttcgtatgttagtggcgtcgtttttgaccaagaatttattgattccgtgg
caaattggcgaacaatggtttcgtgataccttggtggatgctgatttagcgaataatgtg
ctaggttggcagtggacagcgggttgtggcgcggatgctgccccgtatttccgtttattt
aatcccatgttacaaagccagaagttcgacgcgaacggcgcttatataaaacaatggtgt
ccggaattaagccaacgtgctgcgtcgcgtattcatttcccccgagaattaggtgaagct
gtaatggattaccctttacccctgcttgattttaagcagagtcgtgaattagccttaagc
cgctttgcacagattaaggattcgacatga
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