Candidatus Thiocaldithrix dubininis: QJT80_10340
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Entry
QJT80_10340 CDS
T09759
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QJT80_10340 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdu01007
]
QJT80_10340 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdu03016
]
QJT80_10340 (thrS)
Enzymes [BR:
tdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
QJT80_10340 (thrS)
Amino acid related enzymes [BR:
tdu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
QJT80_10340 (thrS)
Transfer RNA biogenesis [BR:
tdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
QJT80_10340 (thrS)
Prokaryotic type
QJT80_10340 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
WGZ89900
UniProt:
A0AA95H3K9
LinkDB
All DBs
Position
complement(2206425..2208353)
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AA seq
642 aa
AA seq
DB search
MPVITLPDGSQRSYANPVSVMAVASDIGAGLAKATLAGKVNDTLVDASYVLEQDANLTIV
TAKDADGLDIIRHSSAHLMAQAVKQLFPDVQVTIGPTVENGFYYDFASARPFTPEDLKAI
DARMQELIKQDIPVERFTLSRDEAVEFFAKLGEKYKAEIIESIPQGETLSLYKQGGFTDL
CRGPHVPSTGRIPAVKVMKVAGAYWRGNSKNEMLQRIYGTAWSNKKDLQAYLTMLEEAEK
RDHRKLGRQLDLFHFHEEAPGSVFWHPKGWTIFQQLIGYMRKRQEAAGYVEINTPDVMDR
SLWEKSGHWFNYRENMFTTQTEDERVFALKPMNCPGGMLMFAQGLKSYRDLPLRMAEFGK
VHRYEPSGALHGLMRVRHFTQDDAHIFCTEEQMAQECKDVVALVLDIYKDFGFDNVHIKL
STRPENRIGSDETWDILEQSLAGALENMGLPYTLFPGEGAFYGPKLEFVLRDAIGRDWQC
GTLQVDMSLPERFDLTYVAEDNTRKRPVMLHRALFGSLERFTGILIEHYEGRFPAWLAPV
QAVALNITDKQADFVQEVTQELRDIGIRAVSDLRNEKIGFKIREHTMQRVPYLLVVGDRE
VETRTIAVRTRTGKDLGTFPLAEVKHYLTSEITARRSSNLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaattactcttcctgacggtagtcaacgttcttatgctaaccctgtatccgta
atggcagttgccagcgatattggcgcgggtttagccaaagccacattagccggtaaagtc
aatgataccttggttgatgccagttatgtgcttgagcaggatgcgaacttaacaatcgtt
accgccaaagatgctgacggtttggatattatccgtcactcttctgcacatttaatggca
caagcggttaagcaattgtttcctgatgtgcaagtgaccattggcccaaccgttgaaaac
ggcttttattatgactttgcctctgcccgcccattcacgcccgaagatttaaaggcgatt
gatgcgcggatgcaagagctgattaagcaagatattccagtcgaacgctttaccttatcg
cgtgatgaagcggtcgaattctttgcaaagctaggcgaaaaatataaagccgaaattatt
gaaagtattccgcaaggtgaaaccttatcgttatataaacaaggtgggtttaccgattta
tgccgggggccacatgtgccaagcacagggcgtattccggcggtaaaagtcatgaaagtg
gcgggcgcttattggcgtggtaattctaaaaacgaaatgctgcaacgcatttacggcaca
gcttggagtaataagaaagatttacaagcttacctcacgatgttggaggaagccgaaaag
cgtgaccaccgtaaattaggtcgtcagctcgatttattccatttccatgaagaagctccc
ggttcggtgttttggcatccgaaaggttggactattttccaacaattaatcggctatatg
cgtaaacgccaagaagcagccggttatgtggaaattaatacaccggatgtaatggatcgt
tcattatgggaaaaatccggtcactggtttaactatcgtgaaaacatgttcactacacaa
actgaagatgaacgtgtatttgctttaaaacctatgaactgccccggcggtatgttgatg
tttgcgcaaggcttgaaaagctatcgtgatttgcctttgcgtatggcggaatttggtaaa
gtgcatcgttatgaaccgtccggtgcattacacggcttaatgcgcgtgcggcactttacc
caagatgacgcacatatcttctgtactgaagaacaaatggcgcaagaatgtaaagatgtt
gtggctttagtattggatatttataaagacttcggttttgataatgtgcatattaagtta
tcaactcgccctgaaaatcgcattggttcagatgaaacttgggatattttagagcaatct
ttagcgggtgcattagagaatatgggcttaccttatactttattccccggtgaaggtgct
ttctatggtcctaagctagaatttgtgttgcgcgatgccattggtcgtgattggcaatgt
ggtacgctacaagtagacatgagcttacccgaacgctttgatctgacttatgttgcggaa
gataatacacgtaaacgccctgtgatgttgcaccgtgctttatttggttcgttggaacgt
ttcacgggtattttaattgaacattatgaaggtcgcttccccgcttggttagcccctgtg
caagcagtggcgttaaatattaccgataaacaagcggattttgtgcaagaagtgacgcaa
gaactacgtgatattgggattcgcgctgtctcagacttgagaaatgaaaaaattggcttt
aaaatccgcgagcatactatgcagcgtgttccctacttgcttgtagtgggtgaccgcgaa
gtagaaacacgtactattgcggtgcgcacacgtactggtaaagacttagggacattccca
ttagcagaagtaaaacattacttaaccagtgaaataaccgcgcgccgttcgtctaatttg
gaggaataa
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