Candidatus Thiocaldithrix dubininis: QJT80_10890
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Entry
QJT80_10890 CDS
T09759
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QJT80_10890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_10890
Transporters [BR:
tdu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
QJT80_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
LAMB1
Motif
Other DBs
NCBI-ProteinID:
WGZ90003
UniProt:
A0AA95KJJ2
LinkDB
All DBs
Position
2332947..2333978
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AA seq
343 aa
AA seq
DB search
MKIQSAIAAALVMLAGAVQADGKLVVYNWAEYIPDGVLADFEKETGIKVEYSTYENNEVM
YSKLKIQKGKGYDIVVPSTYLVSKMRDEGLLQKVDKTKLSNFKNLMPDLLNKPYDPNNDY
SVPYLWGSTGIGVNSEEIDPSTVSKWADLWDTKWKNKLLLVDDVREAFGMALQKNGHSVN
TKNPDEIKQAYEDLQKLMPNVRVFNADAPREPFLAGDVNLGMIWSGEANMAQKENDKIQY
IYPKEGSGFWVDSFTIPAGAENVENAHKFIDYMLKPEVGKKVVEQLGYSTPNKEVKALVE
TKLQNNPIIFPPSDILSKAEFQQDVGDAIKLYNDYWEKLKTGK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcaatccgcaatcgccgcagcgttagtaatgttagcaggcgctgtgcaagct
gatggtaagttggtggtttacaattgggcagaatacattcccgacggcgtactggctgat
tttgaaaaagaaacgggtattaaggtggaatactccacttatgaaaataatgaagtcatg
tactccaagttaaaaatccaaaagggcaaaggctacgatattgttgtaccttccacttat
ttggtctccaaaatgcgcgacgaaggcttattacaaaaagtcgataaaaccaaattgagc
aatttcaaaaacttaatgccggatttgttaaacaagccttacgaccccaacaatgattac
agtgttccttatctgtggggcagcaccggcattggcgtaaatagcgaagaaatcgacccc
agcactgttagcaaatgggcggatttatgggataccaaatggaaaaataaactgttgtta
gttgacgatgtgcgcgaagcgtttggcatggcattacaaaaaaatgggcattccgttaac
accaaaaatcccgatgaaattaaacaagcttacgaagatttacaaaagttgatgcccaat
gtgcgcgtttttaatgctgatgcgccgcgtgaaccgttcttagcaggggacgtaaattta
ggtatgatttggagtggtgaagccaatatggcgcaaaaagaaaacgataaaattcaatat
atttaccctaaagaaggctctggcttctgggtagatagctttaccattccagcgggtgca
gaaaacgtagaaaacgcacataagtttattgactatatgctgaaacccgaagttggcaaa
aaagtggttgaacaactgggctatagcaccccgaataaagaagtgaaagcactggtagag
acgaaattacagaacaacccaattatcttcccaccgagcgacattctgagcaaagctgaa
ttccaacaagacgtaggcgacgcgattaagctgtataacgattattgggaaaaactgaaa
acgggcaaataa
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