Candidatus Thiocaldithrix dubininis: QJT80_11155
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Entry
QJT80_11155 CDS
T09759
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdu03016
]
QJT80_11155 (truB)
Enzymes [BR:
tdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QJT80_11155 (truB)
Transfer RNA biogenesis [BR:
tdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QJT80_11155 (truB)
Prokaryotic type
QJT80_11155 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WGZ90054
UniProt:
A0AA95H6V3
LinkDB
All DBs
Position
complement(2385832..2386734)
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AA seq
300 aa
AA seq
DB search
MARRSFRKLNGILLLDKALGVSSNKALQDARFLYQAEKAGHTGSLDPLASGMLPICFGEA
TKVSGLLLDSSKRYQTTATLGFISTTGDEEGEKLKARAIPALSSAFLESVLSRFRGSIQQ
IPPMYSALKKDGQPLYKLARQGLEVERKPRQVTIYQLQLLGFSENSLQLDVVCSKGTYIR
TLVEDIGEALGCGAYVSRLHRVSVDPFAEQTMYSLQSLREVASQAATDLDHLLLPIDAAL
PHLPRLDLSEEWVARLQQGQRIKVDLADSELLRLYSPTQTFIGLGTIQHHLLLAKRLLAY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttggcacggcgtagctttcgtaaattaaatggtattttattgctggataaggctttaggt
gtttccagcaataaagccttacaagatgcgcgttttctctaccaagctgaaaaagccggg
cataccggcagccttgacccattggcgtctggcatgttgcccatttgctttggtgaagcg
accaaagtttccggtctattattggattctagtaaacgttatcaaaccaccgcgacttta
ggttttatttctaccacgggtgatgaagaaggtgaaaagctgaaggcgcgtgccattcct
gctttaagctctgccttccttgaatccgtattaagccgttttcgtggcagcattcaacaa
attccacccatgtattccgccttgaaaaaagacgggcaacctttgtataaattagcgcgg
caagggctggaagtcgaacgcaagccccggcaagtgacgatttaccaattacagttacta
ggttttagcgaaaatagcctgcaattggatgtggtgtgtagcaaaggcacgtatattcgc
acactggttgaagatattggcgaagctttaggctgtggtgcttatgtatcacgtttacac
cgcgtctcggttgatccatttgcagaacaaactatgtacagcctgcaatctctgcgtgaa
gtagccagccaagccgctactgatttagaccacctattgttgccaattgatgccgctttg
ccacacttgccgcgcttagacttgagcgaagaatgggtagcgcgtttgcagcaaggacaa
cgcattaaagtcgatttagccgatagcgaactgctacgcttatattctcctacgcaaacc
tttattggtttaggtacaatccagcaccatttactgttagctaaacggctgttagcgtat
taa
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