Candidatus Thiocaldithrix dubininis: QJT80_12050
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Entry
QJT80_12050 CDS
T09759
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QJT80_12050 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_12050 (msbA)
Enzymes [BR:
tdu01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
QJT80_12050 (msbA)
Transporters [BR:
tdu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
QJT80_12050 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_24
RsgA_GTPase
AAA_16
AAA_29
ABC_ATPase
AAA_33
AAA_18
AAA_25
DUF3584
MMR_HSR1
TsaE
RNase_H_2
NACHT
AAA_30
MobB
Motif
Other DBs
NCBI-ProteinID:
WGZ90226
UniProt:
A0AA95KEF1
LinkDB
All DBs
Position
complement(2573005..2574765)
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AA seq
586 aa
AA seq
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MSTKPADLSGMSVYRRLLRYVLEYKGYIALGLFGLVLNAITQGLFTWILGKPLMEKAIVQ
HDPQVIQWLPIGILLIFLLRGFATFISGYYISLAGRLVTNSLRNQVFNHLLKMPVRFFEN
NNAGTILSYLNYYTDQIAAASIRSVSSLVQDSLTIIVLIGSMLYYSWQLTLGLLLIVPLI
ALLLNYATKRLRRLSMRLQNSVGHMTQVANEMVRSYKIVRIFNGVEFEFQRFKNANEQNM
RLQMKVMLTDLISSPLIQFLIAIALAAIIYIATRESTLQTLSPGSFMSFITALILLLTPI
RSLTQLNSQLQTAITAGHTLFELLDSETEKDTGTKVLTHCQGKVEYRQVSFHYPETDKWV
LKDINFVAQAGEKIALVGKSGSGKTTLVNLLPRFYDVQQGEILVDDVPIRDVQLNNLRQQ
IAYVGQEIVLFNDTVRNNIAYGEMRNLPDEDIIAAAKAAHALEFIEKLPNGFDTLIGDNG
VLLSGGQRQRISIARAILSKAPILILDEATSALDTESERYIQAALDHLLANRTTFMIAHR
LSTIENADRIFVMQDGVIIETGKHADLLALDGQYARLHRMQFHENA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaagccagcagacttatcaggaatgagcgtttatcgacgcttgctacgttat
gtactggaatacaagggctatattgccttaggtttgtttggtttagtgttgaatgccatt
acccaaggtttatttacgtggattttgggtaagcctttaatggaaaaggcgattgtgcaa
cacgatccacaagtgattcagtggttgccgattgggattttactgattttcctattacga
ggttttgctacctttatctccggttattatattagcttagccggacgcttggtcaccaat
agtttacgtaaccaagtatttaatcatttattaaaaatgcccgtgcgcttttttgaaaat
aataatgcgggcacaatcttatcttatttaaattattacactgaccaaattgctgcggcg
agtattcgcagtgtttcttctctagtccaagattctttaaccattattgtcttaattggt
tcaatgttgtactacagttggcaattaaccttaggtctgttattaatcgtgcctttaatt
gcgctattattaaattatgcgaccaaacggttacgtcgtttaagtatgcgtttacaaaat
tcggtcgggcatatgacgcaagttgccaatgaaatggtacgtagttataaaatcgtgcgc
atttttaatggcgttgaatttgaattccagcgttttaaaaatgctaatgagcaaaatatg
cgtttgcaaatgaaagttatgctaacggatctcattagttcgcccttaattcagttctta
attgcgattgccttagccgcaattatttatatcgccacccgtgaatcgactttgcaaacc
ttatcacccggttcgtttatgtcgtttattacagcgctcattttattgttaacgccgatt
cgtagccttacacaattaaattcacagttacaaaccgcaattacagcagggcatacctta
tttgaattactagacagcgagactgaaaaagataccggtacaaaagtattaacacactgc
caaggtaaagttgaatatcggcaggtaagttttcattatcctgaaaccgataaatgggta
ttaaaggatattaattttgtggcacaagccggtgaaaaaatcgcattagttggtaaatcg
ggcagtggtaaaactactttagtgaatttattgccgcgtttttatgatgtgcaacaaggt
gaaatcttagttgacgatgtgccgattcgggacgttcaattaaataatttgcgtcaacaa
attgcgtatgttgggcaagaaattgtgctgtttaatgatacggtacgtaataatattgct
tacggtgaaatgcgtaatttgccggatgaagacattatagctgctgccaaagccgcgcac
gcgttagagtttattgaaaagctgcccaatggttttgataccctaattggtgataatggc
gtgttattatctggcggtcagcgtcaacgtatttctattgcccgtgcgattttgtcaaaa
gcgccgattctaatattagatgaggccacttccgctttagacaccgaatccgagcgttat
attcaagcggcgttagatcacctattagccaatcgtactacctttatgattgcgcaccgc
ttatccaccattgaaaacgccgaccgtatttttgtgatgcaagacggtgtcattattgaa
acgggtaaacacgcagatttattagccttagacgggcaatacgcgcgtttacaccgtatg
cagtttcatgaaaacgcttga
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