Candidatus Thiocaldithrix dubininis: QJT80_12560
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Entry
QJT80_12560 CDS
T09759
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QJT80_12560 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdu01007
]
QJT80_12560 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdu03016
]
QJT80_12560 (tyrS)
03029 Mitochondrial biogenesis [BR:
tdu03029
]
QJT80_12560 (tyrS)
Enzymes [BR:
tdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
QJT80_12560 (tyrS)
Amino acid related enzymes [BR:
tdu01007
]
Aminoacyl-tRNA synthetase
Class I (A)
QJT80_12560 (tyrS)
Transfer RNA biogenesis [BR:
tdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
QJT80_12560 (tyrS)
Prokaryotic type
QJT80_12560 (tyrS)
Mitochondrial biogenesis [BR:
tdu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
QJT80_12560 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
SYY_C-terminal
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
WGZ90308
UniProt:
A0AA95H708
LinkDB
All DBs
Position
complement(2665432..2666631)
Genome browser
AA seq
399 aa
AA seq
DB search
MSEMLDVMQELARGTEEILVEAEFAEKLKLGRPLRIKAGFDPTAPDLHLGHTVLINKLRQ
FQDLGHHILFLIGDFTGMIGDPTGKSATRPALTVEQVQENSKTYQSQIFKILDPDKTEIV
FNSTWMNPLGTAGLIQLAAKYTVARMLERDDFSKRYKNGQAIAVHEFLYPLIQGYDSVAL
KADVELGGTDQTFNLLVGRELQRHYGQAQQVVMTLPLLEGLDGVNKMSKSLGNYIGITDT
PTDMFGKVMSISDELMWRYFELLSFRPLTELTQFKMSVAEGANPRDLKFLLAEELIERFH
SKAAAVGAREDFIARFQKGAMPDEMPEVTLNTTETTMPIAVLLKSAGLVDSTSEANRMIQ
QGGVKINGNKVEDRNTLIQKGEVAIYQVGKRKFAKVSLN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatgcttgacgtgatgcaggaattagcacgcggtacagaagaaatcttggta
gaagcagaatttgctgagaaattaaaacttggtcgtcccttacgtattaaagctgggttt
gaccccactgcgcccgatttacatttaggtcacaccgttctaattaacaaactgcgtcaa
tttcaagatttaggtcaccatatcttgttcttgattggcgattttacgggcatgattggc
gacccaacgggaaaatccgcaacgcgccccgctttgaccgtcgaacaagtgcaagaaaat
tccaaaacctatcaaagccaaattttcaagattcttgatccagacaaaaccgaaatcgtg
tttaactcaacttggatgaacccattgggaacggcgggtttaattcaattggcagctaaa
tatacggtagcacgtatgttagagcgtgacgattttagtaagcgctataaaaatgggcag
gcaattgccgttcatgaattcttataccctttaattcaaggctacgattccgtcgcatta
aaagctgatgttgaattgggcggaacagatcaaacctttaacctattggttgggcgtgaa
ttgcaacgtcattacggacaagcccaacaagttgtcatgaccttacctttattagaaggt
ttagatggcgtgaataagatgtcaaagtcattaggcaactatatcggtattaccgatacg
cctactgatatgtttggcaaagttatgtctatttcagacgaactaatgtggcgttacttt
gagttactaagcttccgtcctttaactgaactcacgcaatttaaaatgtcggtggcggaa
ggtgcgaatccacgtgacttaaagttcttattagcagaggaacttattgagcgttttcat
tctaaagcggctgccgtgggggcgcgtgaagacttcattgcacgttttcaaaaaggtgca
atgcctgatgaaatgccagaagtgacgttgaataccactgagacaacaatgccgattgca
gttttattgaaaagtgcaggcttagtagacagtacatccgaagccaatcgtatgattcaa
caaggcggcgttaaaattaatggcaataaggttgaagaccgtaatacattgattcaaaaa
ggcgaagtggctatttatcaggttggtaaaagaaagttcgccaaagtcagcttaaattaa
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