Candidatus Thiocaldithrix dubininis: QJT80_13410
Help
Entry
QJT80_13410 CDS
T09759
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00051
Fructose and mannose metabolism
tdu00541
Biosynthesis of various nucleotide sugars
tdu01100
Metabolic pathways
tdu01250
Biosynthesis of nucleotide sugars
Module
tdu_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
QJT80_13410 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QJT80_13410 (gmd)
Enzymes [BR:
tdu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
QJT80_13410 (gmd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
WGZ90471
UniProt:
A0AA95H451
LinkDB
All DBs
Position
complement(2839048..2840088)
Genome browser
AA seq
346 aa
AA seq
DB search
MFKKIAIITGITGQDGAYLAQLLLEKDYKVYGTYRRTASINFWRIRELDIYNHPNLSLVE
YDLTDLSSSIRLLQQTQATEVYNLAAQSFVGVSFDQPITTAKITGLGALNLLEAIRIVNP
KVRYYQASTSEMYGKVQEIPQCESTPFYPRSPYGVAKLYAHWMTINYRESYNIFATSGIL
FNHESPLRGMEFVTRKITDAVARIYLGKQNQLELGNLDAKRDWGFAKDYVEGMWRMLQVE
EPDTYVLATNRTETVRDFVTMAFRAVGKDLVWQGQERLEIGIDLSTGKKVVQVNPKFYRP
AEVDLLIGNPGHAKEKLDWEPKTTLEQLCTMMVDADVKRVKMGYSF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaaatagctattattactggtattacgggtcaagatggagcttatctagct
caattacttttagaaaaagattacaaagtttatggaacatatcgccgtacagcttctatc
aatttttggcgtattagggaattagatatatacaatcaccctaatttatctttagttgaa
tatgatttaaccgatctgagttcaagtatacgtttattgcaacaaacacaggctacggag
gtttataatcttgctgctcaaagtttcgttggtgtttcatttgatcagcctataacaaca
gcaaaaattaccggcttgggagcactaaatttattggaggctattcgtatagttaaccct
aaagtgcgttattatcaagcgagtacatctgaaatgtatggtaaggtacaagaaattcct
caatgcgaaagtactcctttttatccccgcagtccttacggtgtggccaaactttacgct
cactggatgactattaactaccgtgaaagttataacatttttgcgacaagcggtatttta
ttcaatcacgagtcgccattacgagggatggaatttgtaactagaaaaattacagatgct
gtagcacgtatttatttaggaaagcaaaatcaattagaacttggtaatcttgatgcaaaa
cgtgattgggggtttgctaaagattatgtcgaaggtatgtggcgtatgttacaagttgaa
gagcccgatacctatgttttagcaactaatcgtacagaaacagtacgcgatttcgttacc
atggcatttagagctgttggaaaagacctagtatggcaaggtcaagaaaggttagaaata
ggaattgatctatctactggtaagaaagtagttcaagttaaccctaagttttacagacct
gctgaagtagatttattgataggtaatcccggtcatgccaaagaaaagttagattgggaa
cctaaaaccacccttgaacagttatgtacgatgatggtagatgctgacgtaaagcgtgtt
aaaatgggatattcattttaa
DBGET
integrated database retrieval system