Triplophysa dalaica: 130406883
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Entry
130406883 CDS
T09616
Symbol
smarcad1a
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130406883 (smarcad1a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130406883 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
CUE
ERCC3_RAD25_C
T2SSK
HHH_3
Motif
Other DBs
NCBI-GeneID:
130406883
NCBI-ProteinID:
XP_056585435
LinkDB
All DBs
Position
18:10926019..10933091
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AA seq
966 aa
AA seq
DB search
MSLFNLERFRFQRDKSADSGSKSSDGSSSDKENHRAQQKKVTLEGRSVTVRLQRQALEHV
SSDDKVVRMSKDSLSKDTEDKVSKLMEMFPQKSKKDLVEVVESTSTLXGAVAHCLLLYGE
EDSGRQKGKTRYNEDNDNIQPMKRRKVVRSDSEDKEEFEQEENQEPSKENQKALIKKLKK
KLPDLENEVLKDVLREHEWDYENALGSLLMFSSSDSSSPEAPKKQKAESSGSKKQNGKSS
QRADSSSSLAKWLTAASSPVRNVSSSSTPKTQKPSSSKNTIKDTSVKHERKEDLLLDNIS
GSDGEEDLDGELDSISDELDSDDEDSIAVPLQDQIIQFLQEASLDELALISGCSVKKAQK
IISLRPFNTWKDVKEQFFKDNGLSIELVHGCRVVLKERQVVRDLMGRCEKIAQKMTKDVT
QVIEAGLGFMKQPKILNSNFKLQPYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAISF
LAHLYEKGIKGPHLITVPSSTLDNWVRELGNWCPSLKVLVYYGSVEDRKYLRQEILSNLI
DFNIIVSTYNITIGNDYDRSLFRKMKLKYAIFDEGHMLKNMNSLRYRHLMAINAEHRLLL
TGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRPAEEESSFHKNRIAQAKLIMKP
FILRRVKRDVLKQLPPKVEKIEMCPMSEAQQKLYGKLFKRLKKAPSEDKRELCNVMMQLR
KMANHPLLHRQYYTSEKLAAMSKAMIKEPTHFDADPALIQEDMEIMSDFELHNLCKQYSS
ISKFQLDKELILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMVLDIVEILLKHLDHEFVR
LDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANAVILHDIDCNPFNDKQA
EDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLEQDMTTDGGEDGAMTEQMAELL
KVSLGL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagcttattcaatctcgaacggttccgtttccaacgagataaatctgctgacagtggc
agtaagtcgtcggacggatccagctctgataaagagaatcaccgggcccagcaaaagaag
gtaacgttagaaggccgaagcgttacagtcaggttacagagacaggcacttgagcatgtt
tcttctgatgacaaagttgtaaggatgagcaaggattctctatcaaaggacacagaagac
aaagtgtcgaaactaatggagatgttcccgcagaagagcaagaaagatttggtggaggtg
gttgagagtaccagcacactgngaggagctgtagcacactgtttgttactgtacggtgaa
gaagattcaggcaggcagaaaggcaaaacaaggtataatgaagataatgataacattcag
ccaatgaagaggagaaaagttgtgcgctctgattctgaggataaggaagaatttgagcaa
gaggagaaccaggaaccaagcaaagaaaaccagaaagctcttataaagaagctcaagaag
aaactacctgatttagaaaatgaggtcttgaaagatgtccttagagagcacgaatgggac
tatgaaaacgccttgggatcattgctaatgttttcatcttcagattccagttcaccagag
gctccgaaaaaacaaaaggccgaatcatctggttccaagaaacaaaatggcaagagctca
cagagggcagacagctcatctagtctcgcaaaatggctgacagctgcgtcgtcacctgtg
cgaaacgtctccagctcttccactcccaaaacacaaaaaccatctagcagcaagaacaca
attaaggacacatctgtaaaacatgagaggaaagaagatttacttttagataacatcagt
ggatctgacggtgaggaggacctggacggcgagcttgacagcatttcagatgagctggac
tcggatgatgaggacagtatagctgttcctctccaagaccagatcattcaattcctccaa
gaggcttctctagatgagcttgcacttatatctggctgctcggtcaaaaaagctcagaag
ataatttccttgaggccctttaatacttggaaggatgtgaaagagcagttcttcaaggat
aatggtctttctatagagctggtgcatggctgtagggtggtgctgaaggagaggcaggtg
gtcagagacctcatgggcagatgtgagaagatcgcacagaaaatgactaaagatgtcacc
caggtcatagaagcaggcttgggcttcatgaagcaacccaaaatcctgaacagcaatttt
aaattgcagccgtatcagctgattggcttgaagtggctgattctgctccaccagcacaag
ctcagtggaatcctagcagatgaaatggggttgggtaagactattcaggccatctctttc
ctggctcatctgtatgaaaaaggcatcaaagggcctcaccttataaccgtgccctcgtcc
acactggataactgggttcgtgaattgggtaattggtgccccagtctgaaagttcttgtg
tactatggttcagtggaagaccgcaaatatttgcgtcaagaaatactaagcaacctgatt
gatttcaacatcatagtgtccacgtacaacatcacaattggaaatgattatgaccgcagt
ctcttccgcaagatgaagctgaagtatgccatatttgatgagggtcacatgcttaaaaat
atgaactcgctgcgctaccgccacctcatggccatcaatgctgagcacagattattgtta
actggaacacctttacaaaacaacctgcttgagctcatgtctctgctaaacttcatcatg
ccttccatgttctccagcagcacctcacagatctccaagatgttctccacgaggccggca
gaagaggagagcagttttcataagaatagaatcgcacaagctaaacttataatgaagcca
tttatcctgagacgagtcaagcgtgatgtgttgaaacagcttccaccaaaagtggaaaag
attgaaatgtgtcccatgagtgaggcccagcagaaactctacgggaagctttttaaaagg
ctcaaaaaggctccatctgaagataagcgagagctctgtaatgtgatgatgcagctgaga
aagatggccaatcatccattgttacaccgccagtattataccagtgaaaaattggctgcc
atgagcaaggccatgataaaggaaccaacacattttgatgcagaccctgcgctgatccaa
gaggacatggaaatcatgtctgactttgagctgcataatttatgcaagcagtacagctcc
atcagcaaatttcagctggacaaagagctcatcttagactctggaaagtttgctctgcta
accaagacactcgccaagctcaaagaaaagggtgatagggttgtgctgttcagtcagttc
accatggtgctggacattgtggagatcctgctgaaacatcttgaccatgagtttgttcgg
ttggatggctctactcccatggcagagaggattggccttatcgacaaatacaacacaaac
ccggagatctttgtgtttctcctgtcgacccgtgccggagggcagggaatcaacctcgcc
tctgctaacgcagtgatactacacgacattgactgtaatccgttcaatgataagcaagca
gaggaccgttgtcatcgaatggggcagacgagaacagtgcaggtgatcaagctcatcagc
aaggactcgattgaggactgcatgcttcgtgtgggacaagagaaattgaaactggagcag
gacatgaccactgatggaggtgaggatggtgccatgactgaacaaatggccgagttgctc
aaagtctcactgggcctctaa
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