Triplophysa dalaica: 130406891
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Entry
130406891 CDS
T09616
Symbol
brpf1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130406891 (brpf1)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
130406891 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
130406891
NCBI-ProteinID:
XP_056585447
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All DBs
Position
18:19838366..19875760
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AA seq
1312 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVESCRKVYKSYSGIEYHLYHYDHDNPPPPQSTPQKK
RKGRPPRVSLAGSGDGPDSSTGSGITGQGTTPGSPAERSDNSNSPVRETMTYAEAQRMVE
LEIRGRVHRISIFENLDVFSEEDSGAEDPPSSGIGGSASCNGGGVEGGIGKDRLDCSATN
GEKGPQKTGKHKSKEKKKDISSHHHMNPPGPAVKLPEVVFRELDEERPDAPPRPTSYYRL
GYCLLLRYIDKSAEELDEDVEYDIDEEDYIWLDFMNKKRESDGVSPITQEVFEYLMDRLE
KESYFESHNKWASTCPSGLSIGSSAAFFDDSSRGSQTANLGDPSSLVDEDAVCCICNDGE
CQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQT
DDARWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKA
NCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIHTPPGSARPLAGVGGTS
VGSSQSEGEAEDEEDMAGVDEEGKGCSSERAKRAKAKSRIKMKRARKILAERRAAAPVVS
VPCIPPHKLSKITSNLAVQRKSQFMQRLHSYWTLKRQSRNGVPLLRRLQTHLQSQRNTEP
LPTITRDGEEKHSVLKEQLKAWQRLRHDLERARLLVELIRKREKLKRETIKIQEMALELQ
LTPFLILLRSTLEQLQERDTNNFFTEPVPLSEVPDYLDHIERPMDFQTMWKGLESHRYLS
FETFETDFLTIVNNCLKYNAKDTVFYRSALRLREAGGAVLRQARRQAERIGYDYETGMHL
PREPSPESPHERERERERERERFRERERSASAAEDDLLLENRRRLPLDEQLQILLARYDE
VMSGKHSIGQSRRAKALKKEMTVIKRKLAHQREGGCGLGNHESSLSLERSSVLAHHASAS
GRHDDGESSSHEIGGKDLNVSSSALAPEVGRRTSVLFSKKNPKATGPPKRPGRPPKNRDL
LHGPGVLSSSPIGPPQLPSLPQSRKRPHSPQSSSSSETDSEHDHLILDLHSNGFGGSSQP
VTESFLVYRNERSLPRSSSDSESTSSSSSSAASDRTSTTPSKQGRGKASFSRSAFPEDSS
EETSGTENDSYSMGGARGVSHLVRGRARSGCWMSSDDYSSLDALDLVWAKCRGYPSYPAL
IIDPKMPREGVFHRGVPIPVPPLEVLKLGEQMTQEAREHLFLVLFFDNKRTWQWLPRSKL
VPLGVNQDLDKEKMLEGRKSNIRKSVQVAYHRAMQHRNKVQGDPSSDTSDSD
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggggctggactttgatgtcaagacattctgccacaacctgcgggctaccaaacccccc
tatgagtgcccagtggaaagctgccgtaaagtctacaaaagctacagcggcattgaatat
cacctttaccactacgatcacgacaatccaccgcctccccagagcactcctcagaagaag
cgtaagggccgaccgcctagggtctccttggcagggtcaggagatggcccagattctagt
accggttctgggatcactgggcagggaactacgccgggtagcccagccgaacgttctgat
aactccaattctcctgtgagagagacaatgacctatgcggaagctcagcgaatggtagaa
ctggagatccgtgggcgagtgcaccgcatcagcatctttgagaacctggatgtattttca
gaggaggacagtggtgctgaagatccgccatcttctggaatcgggggctcagcttcgtgt
aatgggggtggagtcgagggtggcattggtaaggacagattggattgttctgcaaccaat
ggcgagaaagggcctcaaaaaacaggaaagcacaaaagcaaagagaagaaaaaagacatc
agttcacaccatcacatgaacccacctggaccagccgtgaagttgcctgaagtggtcttt
cgagagctggatgaggaaagaccggatgcaccccctcgacccacatcttactacagactt
ggatactgtttacttctcaggtacattgataagtcggcagaggagctggatgaggacgtg
gagtatgacatagatgaggaagactacatctggctggacttcatgaataaaaagcgagaa
agtgacggggtttctcccatcactcaggaggtttttgagtatcttatggatcgactggag
aaggaatcttactttgagagtcacaacaagtgggcgagcacatgtccttcaggtctgtcc
attggctcctctgctgcgtttttcgacgacagctctcggggttcccaaactgcgaacttg
ggtgaccccagctctctggtggatgaagatgccgtttgctgtatctgtaatgacggcgag
tgtcagaacagtaatgttatcctgttctgtgacatgtgtaacctggcggtgcatcaggag
tgttacggtgttccctacattccagagggccaatggctgtgtcggcgctgcctgcagtcg
ccatccagagctgtggactgtgcactctgccccaacaaaggcggtgcttttaaacagaca
gatgatgcccgctgggcacatgtagtatgtgccctctggatcccggaggtgtgttttgct
aatacggtcttccttgagcctatagacagcatagagcacatccccccggcccgctggaag
cttacctgttacatctgtaaacagcgtggctccggtgcatgcatccagtgtcacaaagct
aactgctacaccgcattccatgtcacctgtgctcagcaggccggcctctacatgaaaatg
gagccagtgcgagaaacaggtgcaaacgggacttcatttagtgtacgcaagactgcctac
tgcgacatccacaccccaccaggatctgcccgtccactggcaggggtgggaggcacaagt
gtgggctcctcacagagtgagggggaagcggaggatgaggaggatatggcaggcgttgat
gaggaaggaaaggggtgcagctcagagcgggcaaagcgggcgaaagctaaatcacggata
aagatgaaaagggcaaggaagatactggctgagaggagagcagccgcacctgtagtgtct
gtgccatgcataccaccacacaagttaagtaagatcacgagcaatctagcagtgcagagg
aaaagtcagttcatgcagagactccatagctactggacactgaagagacagagccgcaac
ggtgttcctctcctgcgacgtctccagacgcacctgcagtcccagcgcaacacggagcca
ctccccactattaccagggatggtgaagagaaacattctgtgttgaaggagcagttgaaa
gcgtggcagagactccgtcatgacctagagagagcccggctgctggtggagctcatccgc
aagagagagaagctcaagagagagacaataaagattcaggagatggcgttagagctgcag
ttgactcctttcctgattttgttgcgtagcactctggaacagctgcaggagcgagacacc
aataatttctttactgagcctgtacctttaagtgaggtcccagattacctggatcacatt
gaacgcccgatggactttcagacaatgtggaagggtttagaatcacatcgctatctaagc
tttgaaacttttgagactgactttctgaccattgtcaacaactgtctgaagtacaatgcc
aaagacacagtcttctaccgctctgcactgcgattgcgagaagcgggtggtgctgtttta
cggcaggcgcgcagacaggcagagagaattggctatgattatgagacaggcatgcatctt
ccgagagagccaagcccggagtcaccacacgagcgagagagagagagggaaagagagaga
gagagattcagagagagagagagatcggcgtcagctgctgaagatgatcttttgctggag
aaccgacggcgtttgcctctggacgagcagctgcagatcctgctggcacgttatgatgaa
gtcatgtcagggaagcacagtatcggccagtcccggcgagctaaagccttgaagaaggag
atgaccgtcattaagcgtaagctggctcatcagcgtgagggcggctgtggtttgggcaat
cacgagtcgagcttgtcgctggaacgcagctcagtccttgcgcatcatgcctctgcgagc
ggccgtcatgatgatggagagagcagcagtcatgagattggtggaaaagaccttaatgtg
tcctcttctgcgctggcccctgaggttggacgtcgtacatctgtcctcttctcaaagaaa
aatcccaaagccaccggccctccgaagcgccccggtcgaccccctaagaaccgagacctg
ttgcatggaccaggggtgctgagctctagtccaattggcccaccccagctgccttctctc
ccccaatcacgcaagagaccccacagtccacagtccagctccagctcggagacagacagc
gaacacgatcacctcatactggacctgcacagtaatggttttggtggaagcagtcagccg
gtgactgaaagttttctggtgtacagaaatgaacgcagtctcccgcgctccagctccgac
tcagagtccaccagcagtagcagcagcagtgccgcatccgacaggaccagtaccactccc
tccaaacagggacgtggaaaggcctcattttcccgctcagcatttccagaggacagcagc
gaagagacgtctgggacagaaaacgactcgtactcaatgggcggagcgagaggagtttcc
cacttggttcgaggcagggcccgctctggatgctggatgagttctgatgattacagctct
ctggatgctcttgatcttgtgtgggccaagtgcagaggatacccctcttaccccgcactg
atcattgatcccaagatgccacgagaaggtgtgttccacaggggcgtcccgatcccagtt
cctcctctagaggtgctaaaactaggagagcagatgacccaggaggcccgagaacatctc
tttcttgtgctattctttgacaacaagagaacctggcagtggctgccgcgctccaaactg
gttcctcttggtgtgaatcaggatctagacaaggagaagatgttggagggcagaaagtca
aacatcaggaagtccgttcaggtggcgtaccaccgtgcaatgcagcaccgtaacaaagtc
cagggtgaccccagcagtgataccagtgacagcgactga
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