Triplophysa dalaica: 130406894
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Entry
130406894 CDS
T09616
Symbol
apex2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130406894 (apex2)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130406894 (apex2)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130406894 (apex2)
BRITE hierarchy
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
130406894
NCBI-ProteinID:
XP_056585454
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Position
18:complement(8068625..8071265)
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AA seq
563 aa
AA seq
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MKIVTWNINGIRTFKSGIKKILDSFEADIICVQETKVTRDLLEENTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFLAEEGLTGLLITHEXAVGCYGDQLEFSSEELLALDNEGRAV
ITQHHFTGADAPQTLSVINVYCPRADPDKPERKQYKLQFYKLLQSRAEAILRSGSHVIVL
GDVNTSHRPIDHCDPEDVDNFEGNPGRKWLDHFLSGAIENGDNEDQFGNISQKSASGGKF
VDSFRHFHPKRSDAFTCWSTMTGARQTNYGTRIDYIFSNRFLVENVFTGVDIMPEVEGSD
HCPVWAQLSCTLLSSPKIPPLCTRHMPEFTGRQQKLSRFFVKVSEKQNISKGYKESLPGS
QEAGEIRENLNPVVQGNNIIKKRPADKEAETKAHKAKKSKLTKTESKPKGNLLAFFKPKQ
TPLNPPSLELNPDPGSESPACLTNAKLTDDTHCNSTQTKSSDVALDTCVSMVTETKNQDQ
QDKETAPVEMCRKGPCSSFWKEVLRGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCA
RPQGHATNPQARCNFFAWVDKGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaacataaatgggatacgaacgttcaaaagtggcatcaagaaa
attctggattcatttgaagctgatataatctgcgtccaagagactaaagttacccgtgac
ctgctggaggaaaatacagcgattgtggatggctacaattcttattttagttttagccga
ggacgaagtggatactccggtgtcgcaacatactgtaaagatagtgctacaccattcctg
gcagaggaaggattgacaggtctgctcatcactcatgagnaggctgtcggttgctatggt
gaccagcttgagttttcaagtgaagagttgctggccttagacaatgagggaagggctgtc
atcacccagcatcacttcactggtgcagatgcacctcaaacgttgtctgtgattaatgtt
tactgtccacgagctgatccagacaaacctgagagaaaacagtacaagctccagttttac
aagcttctccaaagcagagctgaagccatcttgcgctcaggaagtcatgtaatcgtgttg
ggggatgtgaacacctctcatcgacccatagaccactgtgacccagaggatgtggataac
tttgagggtaatcctgggagaaagtggctggaccatttcctatctggagcgatagaaaat
ggtgacaacgaagatcaatttgggaatatctcgcagaaatctgcctcgggtggcaagttt
gttgacagctttcgtcatttccacccaaagcggtctgatgccttcacctgctggtccaca
atgactggtgccagacagaccaactatggcacacgtatcgattacatcttctccaatcgc
tttctggtggagaacgtattcactggagtggatatcatgccagaggtagagggatctgat
cactgccctgtatgggcacaacttagctgtaccctcctgtctagtcccaagattccacct
ctatgcacacgtcacatgccagaatttactggcagacagcagaaactttcacgttttttt
gtcaaggtttctgaaaaacagaacatatctaaaggctataaagagagtcttcctggatca
caggaggctggggagattagggaaaacttgaatcctgtggtacaggggaacaatattata
aagaagagaccagcagataaagaagcagagacgaaagcacacaaagctaaaaagagcaag
ctgacaaaaacagaaagtaaacccaaaggtaaccttttagctttttttaagcctaaacaa
acaccgttgaaccctcccagtctggaattaaacccagacccaggtagtgagagcccagcg
tgtctaaccaatgctaaactgactgatgacacacactgcaattctacccagaccaaaagc
agtgatgtggctttggacacatgtgtctccatggtaaccgagacaaaaaatcaggatcaa
caggacaaggaaactgcacctgtagagatgtgtaggaagggcccgtgttctagtttttgg
aaagaggttttgcgcggaccccctcagccacctctctgcaagtcacacaatgagccctgt
gtgctacggacggtaaaaaaggcaggacctaatttgggccgtcagttttttgtatgtgcc
cgtcctcaaggccacgctaccaatcctcaggccagatgtaacttttttgcctgggttgat
aaagggaagtag
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