Triplophysa dalaica: 130407012
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Entry
130407012 CDS
T09616
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
tdw
Triplophysa dalaica
Pathway
tdw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130407012 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130407012 (dmxl1)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130407012 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
130407012 (dmxl1)
RAVE complex
130407012 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IP5PC_F
CBM_56
Motif
Other DBs
NCBI-GeneID:
130407012
NCBI-ProteinID:
XP_056585614
LinkDB
All DBs
Position
18:147417..170960
Genome browser
AA seq
2898 aa
AA seq
DB search
MNLHQVLTGAVNPGDNSFSVGGINNQPFTAYASGCDVVILGSDFERIQIIPGAKHGNIQV
GCVDCSLQRGQIAASYGNIICVFEPVEVGPRGKAQKLNYHWQKSGQFAVQSVAHILTWHP
TGTCLLTGSSSLQLWCKLHISPDAEEEQQAAASDPQSSWSCVWQCKTAASTHFIQFSPDG
EFFATAGKDDCLVKVWYSSSRWQVDVTKLITGAEINFSFIYLAHPRSVTGFTWRKTSKYM
PRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGHSRHSNMNSDVKKSSSNSGAHNPLEL
NLKHSWREQVRGLSQLSYTGPLPQQQNKHYSHRTNILHANSLCHFHIAASINPATDIPLL
PSISSMSGSEEEPGGTFTVHWLNNKELNLTLNMEVFLQQLRSSVEQNDADEDGDSAGESA
SLPAAAVDHQVDVLLSNWNKAADMLFSIHPMDGSLLVWNVDWLDEYQPGMFRQAQVSFVS
RIPVAFPTGDANSLSRSVVMYACNKNVDLAIQHGRHRPAGLPQSTSVLIGLGQNKPASNN
MRLSIFTPSVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHS
LLPLLLTTSHHNALKTPDEGAGPPQPSGLSASSHRSRTSSGGVSPNAIYSELILWRVDPV
GPLSFSGGVSELARINSLHASAFSNVAWLPTFIPSNCLGAYGNSPSACFVASDGQSLRLY
QAVIEAKKLLSELSNPDISKYVGEVFNIISQQSTDRPGCIIELDAITDFQGKQTQLLHVF
EEDLILGNEKSDDGSQDSDSSRTAFSARFFLVVLEFSHGGRSILHMWHLHLEADPVNMDQ
SRTSSPVNGSPFETFSSPQTLRSKLSKSNLQSACHLTLTNTKVFCQELRLPEGVEVIRVT
PAAGHLSSSSLQPAGRAPYLLATSCSDGAVRFWRCNSVSEPETPEKTSYVWEEWPRIVEE
GLVNSSALSVSGQLMDLSCCHTSRVVVAHRSERPYGGTAEPLVHVSIFQCESTGGSQWIL
EQKLKISASYSPDSNDCDKSLMVPSFRDLSVLTSDCLAVGRKQVHLDWVSREDGSHILTV
GLGSKLYMYGMLSGKPPELGLSDSGQQRCSSRLVLLRVVDLVSSVEGSLPIPVSLSWVRD
GILVVGMECEMHVYSQWQPPAQVKPAVTTGENSVGTGSVTSLPAAVKQEGLSPNPPKKGL
TRSMTSLAQKLSGKRTVYDLPAELEDSGLFEAAHHLFPTLAQYHPVQLLELMDLGKIKRA
KAILSHLVKCIAGEVVSLKDTPVSHERRLRSLTISASGSTARDPKMFSKSESSDYTEIDS
IPPLPLYSLLAADEETAPRTEERVDGAPTSSRTDTYDELFQTSGLSTDEANPFGADEEDG
NVKVIDLSKYSPTFFGPEHAQVLSGHLLHSSLPGLTRMEQMSLMALADTIASTSTDIGES
QGKGRGGETLDECGLKFLLAVRLHTFLLTSLPSAHRVQLLRQGLSTCHYAWAFHSEAEEE
LLHTLPALQREDPTWPEMRAMGVGWWLRSTNKLRKCIEKVAKASYQRNNDPLDAALFYLA
MKKKTVVWGLYRAQHNVKMTAFFSNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFMLAG
SLKDAVEVCIEKMQDLQLALVICRLYESEFETSATYKRILQRHVLGHEQQIPAHQDPFLR
SMAHWVLEDYSWALDTLLEQPHVHTDISDHETAATSPCNPDVFNFYTFLRVHPLLLRRHL
GSSDQAKVALTAEGRVSDSISLMERRLFFTAAHAHLQAGCPMLALEVLSKMPKVIKRAKT
LLSRENPSPSLKEKAKDLSGVLMNGFESDSLSSPGEMSQSDSLLSLDWSQPSITLQDEPL
ELKWDSDKDDSEDEESGLAMKTIQPENSSVPPDTPSSGTEDTTHESLGEDILAARLKFSS
CLKILTTELRTLSTGYELDGGKLRHQLCHWLERGVAALQRCCGYNPLLQRLSEGISADLS
QVGTGDGPEVRGGDVQHRRRLWLQRNQPLLRIFLSYCGLHGSHGAGLASVRMELILLLQE
SQQDVTQQHTSVPLLLAWTAHSKTVVANPIVHLSNLTHDILHTINALDSPPQPDVVDNKI
YVIHTLAASLSACIYQCLCDGHNYTHVNPFTGIVYQSLLLTHQPPVRSVSMEETVLPNTS
PAQWPGIAALIPLLNALGDENQAGLPVLLCEILTAVFLSLFVHGLATHSTHQLFRIVAHP
LNSRLWVAVFGGGVCVPVVQTSSSASVEDAEGKQRRVRLQSSQSHSRDVPDRAVTEQEPS
GSKERFVPPELSIWDYFMAKPYVPPSASGEEYDSEGSQGSEDEEEDDYEDDDVFHHNSPH
EEHSNSNSYSWCLMRLTMVQKVLLNLKSFYPAAGHDLLDLPVCSPLCHAALKTLQRWEQL
LLKRLEIFGGPPSQYISTQLQDESMSSGPALLRHKALLEPANTPFKSRRRSALPVRRLWQ
FLVKQEEVQETFIRNIFTKKRDQDEETDSLNHSVVLEPNQQQIEGSLGSPGAKARIIHKE
SDLITAFAINKANRNCLVIASTQEIQELDVSAILATQILTWIDDEAEMEVKGNDDFLVVH
ARDDFTALHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVLIKRNISNVRRMTSHPTLPYY
LTGAQDGSVRMFEWGHSQQITCFRSPGNCRVTRIRFNFQGNKFGIVDADGALSLWQTSTG
GNTPKPFLTLQCHNKTANDFAFVGSSSLIATAGLSTDNRNVCLWDTLVTPANSLVQAFSC
HESGATVLALASKQQLLISGGRRGWISVLDLSQKIHRQSFQAHDSPVKALAVDSAEERFI
SGSAEGNIKVWSMSTQSLLQTFTNEHARQSIFRNLGMGVMQIETDPANHVFSCGADGTMK
MRVLPDDSAIKTHVKFIM
NT seq
8697 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaccaggttctgacaggggccgtcaaccccggagacaacagcttctctgtc
ggcggtataaacaaccagcccttcacggcgtacgcctcgggctgtgacgtggtcattctg
ggcagtgattttgagaggatccagattatcccaggagccaaacatgggaacattcaggtg
ggctgtgtggactgttcactgcagcgaggtcagatcgcggcatcttacggaaacattatt
tgcgtgttcgagcctgtagaggtcggtccacgaggaaaagcacagaagctgaattatcac
tggcagaagagcggtcagtttgctgtgcagtcagtggcacacatcttgacctggcatcca
acaggtacttgtctgttgaccggctcatcatctcttcagttgtggtgtaagctgcacatc
agtccagatgctgaagaggagcaacaggcggcggcttctgaccctcagagctcgtggagt
tgtgtttggcaatgcaagacagccgcgtcgacacatttcatccagttttctccagatgga
gagttttttgccactgctggaaaggacgactgtttagtgaaagtgtggtacagctccagc
agatggcaggttgacgttactaaactgatcactggggcagagatcaacttctccttcatt
tacctggctcaccctcgctccgtcaccggtttcacctggaggaagaccagcaagtacatg
cccagaggtgcggtgtgtaatgttctgctgacctgctgtaaggacagtgtgtgtcgactc
tgggccgagacgctgttgcccagtgactgtcttctgtctggacacagcagacacagcaat
atgaacagtgatgtaaagaaatcctccagcaacagcggcgcacacaacccgctggagctg
aacctgaagcactcatggagagagcaggtgagaggtttgtctcagctgtcgtacacaggc
cctctgcctcaacagcagaacaaacattacagccaccgaaccaacatcctacacgccaac
tctctctgtcactttcacatcgctgccagcattaacccagccacagacatccctctgctg
ccctccatctcatctatgagcggctctgaggaggaaccgggtggcaccttcaccgttcac
tggctgaacaacaaagagctgaacctgacgctgaacatggaggtgtttcttcagcagctc
aggagcagcgtcgagcagaatgacgcagacgaggatggggacagcgcgggcgaatcggcc
tctcttcctgcggctgctgtagatcatcaggtggacgtgctgctgagtaactggaacaaa
gctgcagatatgctcttcagcattcacccgatggacggatcgctgctggtgtggaacgtc
gactggttggatgaataccagcccggcatgttccgacaggcgcaggtttccttcgtgtca
cgaattcctgttgccttccccaccggggacgccaactcactcagtcgcagcgttgtgatg
tacgcctgcaacaaaaacgtggacctggccattcagcacggacgtcatcggcccgctggt
ctgccccagtccacctccgttctgatcggcctgggtcagaacaaacccgcctccaacaac
atgcgtctcagcatcttcacccccagcgtcctgatgatctccaaacacgctgatggctcc
cttaaccaatgggccgtcagctttgcggaggactccgccttctcgacggtgctcagcgtc
tctcataaatcacgatactgtggccatcgctttcacctcaacgatctggcctgtcactct
ctgctgcctctgctgctcaccacctcacaccacaatgccctaaagacacctgacgagggc
gctggaccgccgcagccctccggcctcagtgcctcgtctcacaggagcagaacgtcatcg
ggtggcgtatcccccaacgcaatttacagcgagttgatcctgtggcgggtggatccggta
gggccgctgtcgttctcggggggcgtgtcagaactggccaggatcaactcgctgcatgcg
tcagcgttctcaaatgtggcctggctacccacgttcattcccagcaactgcctcggtgcg
tatggcaactcacccagtgcctgttttgtagccagtgacggtcaatcgctcagactctat
caggctgttattgaggccaaaaaactgctgagtgaactctctaaccctgacatctctaaa
tatgtaggagaagtttttaacatcatcagtcaacaatctacggacagaccgggctgcatc
attgagctggatgccatcacagattttcagggcaaacagacgcagctcctgcacgtgttt
gaggaagatctgatcctgggaaatgagaaatcagatgatggttcgcaggattctgattcc
agccggaccgccttctccgctcgattctttctggtggtgctggagttttctcacggcggc
agatcaattctacacatgtggcatcttcatctagaggctgatcctgtcaatatggatcaa
agccgtacttcatcacctgtgaacggttcaccgtttgagacgttcagctcaccacaaacc
ctgagatcaaagctgagcaaatccaaccttcagagcgcctgtcacctcactcttacaaac
actaaagtcttctgtcaggagctccgtctgccggagggtgttgaggtcattcgtgtaaca
cccgctgcaggtcacctgagctcttcgtccttgcagccagccggacgggctccgtatctg
ctggccacgtcctgctcggatggtgccgtcagattctggaggtgtaactctgtctctgag
cccgagactcccgagaaaacatcatacgtgtgggaggagtggcctcggattgtagaggaa
gggttggtcaacagcagcgcactgagtgtttctggacagctcatggacctcagctgctgt
cacaccagtagagtggtggtggcacacaggtcagagagaccttacggtggcactgctgag
cccctcgtgcacgtcagcatattccagtgtgagtccacaggcggatctcagtggatcttg
gaacaaaagctgaagatcagcgcctcttatagtccagatagcaatgactgtgacaaaagc
ttgatggtacccagcttcagggatttatccgtgctcactagcgattgtttagctgtcggc
aggaaacaggttcatttggactgggtttccagagaggatggttctcatatattaaccgtg
ggtctgggatccaaactttacatgtacggcatgctctcgggaaagcctccggagctggga
ctctctgacagcggccagcagcgctgctcctctcgtctggttctcctgcgagtcgtggat
ttggtgtcatccgtcgaggggtcgctacccatccccgtctctctgtcttgggtgcgagat
ggcatcttggtggtcgggatggagtgcgagatgcacgtgtactctcaatggcagcctccg
gcccaagtcaaaccggccgtcaccaccggagagaacagcgtgggcacgggtagcgtgacg
tcacttcccgccgctgtgaaacaggaggggctcagtcccaatcctcctaagaagggcctc
accaggtcaatgactagtttggcccagaagctgagcggaaagagaaccgtgtatgacctg
ccagcagagctggaggattctgggttatttgaggcagctcatcatctcttccccactctg
gcccagtatcatccagtacagcttttagaactcatggacctaggcaagatcaaacgggcc
aaagccatcctgtcccatctggtgaagtgcattgctggggaggttgtgtctctgaaagac
accccagtcagccacgagcggcgtctgcgctctctcaccatcagtgccagcggaagcacc
gccagagacccaaagatgttcagcaagagcgagagctcggactacaccgagatcgactct
atccccccgctacccttatactcactgttggctgccgacgaggagactgctccccgaact
gaagaacgggtcgacggtgctcctacgtccagccgaacggacacctacgatgagctcttc
caaacctcaggtctcagcaccgacgaagcgaatccttttggtgctgacgaggaggacgga
aatgtcaaagtcattgatctatccaagtacagccccacattcttcggtcctgagcatgcg
caggtgttatccggtcacctgctgcactcaagtctgccgggtctgactcggatggaacag
atgtctctgatggctttagcggacactatcgcttccaccagcacagatattggagagagt
caagggaaaggccgaggtggagagacgctggatgaatgtggcctgaagtttctgctggct
gtacgtctgcacactttcctcctgacgtccttaccttcggctcatcgagttcagctgctc
cgtcaaggattatccacctgtcattatgcctgggcgtttcactctgaggccgaggaggaa
cttctgcacacacttccagctctacagagagaagatcccacatggccggagatgagagcg
atgggtgtgggctggtggctcaggagcactaataaactgcgcaaatgcattgagaaggtg
gctaaagcttcatatcagaggaacaacgaccctttagatgcagctttgttttatctggcc
atgaagaagaaaactgttgtttggggactctacagagctcagcataatgtgaagatgaca
gcgttcttcagtaataacttcagtgaggatcgctggagaaaggcagcgttaaagaacgct
ttctctctgctgggtaaacaacgcttccaacattctgccgctttctttatgctggctgga
tccctgaaagacgctgtggaggtttgtatagagaagatgcaggaccttcagctggctctg
gtcatctgtcgcctgtacgagtctgagtttgagacgtccgccacttacaaacggatcctc
cagagacatgtccttggtcacgagcagcagatcccggcccatcaggatcccttcttacgc
agtatggcacactgggtgttagaggactacagctgggctctggacactcttcttgaacag
cctcatgttcacacagatatatcagatcacgagacggcagccacctctccctgtaatcct
gacgtgtttaacttctacacgttcctccgggttcatccgttgctgctccgccgtcacctg
ggctcctcagatcaagctaaagtggctttgacggccgagggccgcgtcagcgactccatc
agtctgatggaaagaagactgttcttcaccgctgctcacgcacacttacaggccggctgt
cccatgctggctttagaagtcctctccaaaatgccaaaggttattaaacgggccaagacg
ctcctcagccgtgagaatccgtctccatcattgaaggagaaagctaaagatctgtccggt
gttctgatgaacggctttgagtctgattctctgtcttctcctggagagatgagtcagtct
gattctctgctcagtcttgactggagtcagccgtccatcaccctgcaggatgaacctctg
gagctcaagtgggacagtgacaaagacgactcggaggacgaggagtctggactggccatg
aagaccatccagccagagaacagcagcgtccctccagacacgccctcctcgggcacagag
gacacaacccacgagtcgctcggcgaggacattctggccgcccggctgaagttcagctcc
tgtctgaagattctcaccacagagttacggacgctgtccacgggctacgagctggacgga
gggaaactgcgtcatcagttgtgtcactggctggagcggggggtggcggccctgcagagg
tgctgcggttataacccgttactacagcgactgtctgaaggcatctctgcggatctgagt
caggtgggcaccggagacggtccagaggtccggggtggagacgtgcagcacagacgcaga
ctctggcttcagaggaaccagccgttgctgcggatcttcctcagttactgcggcctgcac
ggctctcacggcgcaggactggcgtctgtcagaatggagctgattctcttactgcaggag
tctcagcaggacgtcactcagcagcacacatcagttcctctgctgctggcatggaccgct
cactccaaaaccgtggtggcaaatcccatagtgcacctgagcaatctgactcatgatatc
ctgcacaccatcaacgctctggactctcctccacagccggatgtggtggacaacaagatt
tatgtgatccacacgctggcagcgtctctctcagcctgcatctatcagtgtctgtgtgac
ggacacaattacactcatgtgaatccgttcacgggcatcgtctaccagagcctcctgctt
acccatcagccccctgtgaggagcgtgagcatggaggaaaccgtcctgcccaatacctca
cctgcgcagtggcccggtatcgctgctctcattccactgctgaacgctttaggagatgag
aatcaggccggtctgcccgtgcttctgtgcgagatcctcaccgccgtcttcctcagtctg
tttgttcacggtctggccactcactccacccatcagctcttcaggatcgtagctcatccg
ctcaacagcagactctgggtggctgtgtttggaggtggtgtttgtgttcctgtggtgcag
acgtccagctcagcgtcagtggaagatgcagaaggtaagcagaggcgtgtcaggcttcag
tcctcacagagtcattccagagatgttcctgacagagccgtgactgagcaggagccgtcc
ggttctaaagaacgcttcgtgccgcccgaactcagtatctgggattacttcatggcgaag
ccgtacgtgcctccatctgccagtggagaggaatatgattctgagggaagccaaggcagt
gaggatgaggaggaggatgattatgaagatgatgatgtttttcatcacaactctcctcat
gaggaacactccaacagtaactcatacagctggtgcttgatgcgattgaccatggtgcag
aaggttctgttgaacctcaagagcttctacccagcagccggtcatgacctcttagatctg
cccgtgtgttctccgctgtgtcacgcggctctgaagaccctgcagcgctgggagcagctg
ttgttgaagaggttggagatttttggtggtcctccatcacagtacatctccacacagcta
caggacgagagcatgtcgtctggaccggctcttctgaggcacaaagccctgctggagccc
gccaatacacctttcaagtctcggaggcgctcagctctgcccgtcagacgtctgtggcag
tttctggttaaacaggaagaggttcaggaaaccttcatccgtaacatcttcaccaagaaa
cgagatcaggatgaggagactgacagtctgaaccattctgtggtgctggagcccaaccaa
cagcagatcgagggcagtctgggcagccccggggccaaagctcgcatcatccacaaagag
tctgaccttatcaccgccttcgccatcaataaagccaatcgcaactgtttagtgatcgcc
tccactcaggagatccaggagctggacgtctccgccatcctggccactcagatcctgacg
tggattgacgatgaggcagagatggaggtcaaagggaacgatgattttctggtggtccat
gctcgtgatgacttcaccgctttgcacggcaccacgccctacacgcacagcagccccggg
acgcccatcaacatgccctggctgggcggcgtgcagacgggtcgaggagcggctgtgctc
atcaaaagaaacatcagtaatgtgagacggatgacgtcacaccccaccctcccctactat
ctgaccggagctcaggacggaagtgtgaggatgtttgagtggggtcattcacagcagatc
acctgcttcagaagtcctggaaactgcagagtcacaagaatccgctttaattttcagggg
aacaagtttgggattgtagatgcagacggagctttgagtctgtggcagaccagcaccggt
ggaaacacacccaaaccatttctgacacttcagtgtcataataaaactgccaatgatttt
gctttcgtgggatcatcatctctcatcgccacagcaggcctgtcgaccgacaacagaaat
gtttgtctgtgggacacactggtcacaccagctaacagtctggtgcaggcgttcagctgt
catgagtccggcgctaccgttctggctttagcctccaaacagcagctgttgatcagtgga
ggccggaggggttggatcagtgttctggacctcagtcagaagattcacagacagagtttc
caggctcacgattctcctgtcaaagctttggctgtggactccgcagaggaaagattcatc
agcggatcggctgaaggaaacatcaaggtgtggagcatgtccactcagagtctgttacaa
accttcaccaacgaacacgccagacagtccatcttccgcaacctcggcatgggtgtcatg
cagatcgaaaccgacccggccaatcacgtcttctcctgtggggcggacggaaccatgaag
atgcgagtcctgcccgacgacagcgccatcaaaactcatgtgaagtttattatgtag
DBGET
integrated database retrieval system
