Triplophysa dalaica: 130407034
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Entry
130407034 CDS
T09616
Name
(RefSeq) protocadherin-8-like isoform X1
KO
K16499
protocadherin delta 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130407034
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Protocadherins
130407034
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
RibLong
Motif
Other DBs
NCBI-GeneID:
130407034
NCBI-ProteinID:
XP_056585645
EnsemblRapid:
ENSTDLG00000017838
LinkDB
All DBs
Position
18:complement(19687884..19691398)
Genome browser
AA seq
964 aa
AA seq
DB search
MEARKLFASFSLVVVALCTASGTTMKYYIDEEVPLGTIFGNLSLDLKINASEQQNTVFRF
MQEEKSSLILMGEDDGCLTVGARMDRENLCHRSPLCLINFDVVVVSKEKFQLIHVEVLVR
DVNDHAPLFPRDEIQLEFAENVAVGTKFPLEAANDLDVGNNYVQEYHVFQNSHFSIETKR
GEDGIAYPKLVLVKDLDSDVEDTYTLKVTASDGGSPPKLGSVTVRVNVLDSNDNSPQFEL
KSPKVELHEDAPVGYLLLKLYASDPDHGANGEVRYGFMDGVAEEIKDTFAIDFFTGAVTL
RSPVDYETRRSYELNVQAYDLGVNSVPSTSKVTVEIVDVNDNAPEIHIKPMASAREGVAY
ITEAAAVESFVALISTTDRDSGTNGDMRVSLSGHEHFKLKQAYGDTFMIVTTAPLDREKI
PEYNMTVVAEDLGSPPFVTSRRYTIKVSDENDNAPQFSKPVYGISFMENKEPGSYVATLV
ARDLDDGANGQVTYKLIDKDIEGAPLSSYVSVHPISGSLYTLQSLDYEYLKQIEVGIVAS
DGGSTPRSSTAIVKVKVVDENDNAPFITHPVLINGAADVPLSHNAPAGYIAVTVKAHDLD
GGVNSKLSFSLLEDNERMFFINKTTGVIALKHSLSHKQGDTLEIKVMVTDGGRTPFSCTA
TLRFVVTDEELFDEHLVVSFEMTDVERSGEEKTNLEASFIIIILLGAGCAFLLVAIIAVA
FSHRRGQRETPFRKNNGLESTFVRSPVSANSTDSSDSGSCRESGATLSEQLTSTRDDSSY
EEQSQDSDSKLFRPLLKRTNLDSVAMWHDDRQSHHISRNPSIDQTSMKDSGKGDSDIPDS
DSNISGDAVQRTSSSGHRQATNPVYSAPMVGKCQATKEISTTHSSNVASSGYKIAYRTSM
CNYHSANHSVSTWRNYDYIPSALPRAPEQFRDPACHRFYHHNPYSYMGGAPLMTSEVTSS
ATAF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaggaagctgttcgccagttttagtttagtcgtcgttgccctctgcacagcg
agtggcacaaccatgaaatactacatagacgaagaagtcccactgggaacaatatttggc
aacttatcgctggacctgaaaatcaacgcatccgagcagcagaacacagtcttccgtttc
atgcaggaggagaagtcgtctttgatccttatgggagaggatgacgggtgtctgacggtg
ggagctcgcatggaccgagaaaacctctgccatcggtctccgctgtgcctcatcaacttt
gacgttgtggtcgtgtcgaaagaaaagtttcaacttattcacgtcgaggttctggtgaga
gacgtcaacgaccacgctcctctcttcccccgtgacgagatacagctcgagttcgccgaa
aacgtagccgtgggcacaaagttcccgttagaagctgcgaacgacctggatgtgggaaac
aactacgtccaagagtaccacgtatttcaaaacagccattttagtatcgagacaaagaga
ggagaggacggcatcgcataccctaaactcgtcttggttaaagatctcgacagtgatgtg
gaagacacttacactctcaaagtgacggcgagtgatggcggaagtcctccgaagctgggc
tcggtaactgttcgcgtaaacgttttagattcgaacgacaacagccctcagttcgagctc
aagtcccctaaagtggagcttcacgaggacgcaccggtcggctatcttctcctcaaactt
tacgcgtcagatcccgaccatggcgcgaacggtgaagtgcgttatggttttatggacgga
gtcgccgaagaaatcaaggacacctttgctatcgactttttcaccggtgcggtgaccctt
agatcgccagtggactacgaaactagaagatcctacgagctgaatgtgcaagcatacgat
ttaggtgtcaactctgttccgtccacttctaaagtcaccgttgaaattgtggacgtcaac
gacaatgctcccgaaatccacatcaaaccgatggcatccgcgcgcgagggcgtggcgtac
atcacggaagccgcagcggtggaaagttttgtcgctctcatcagcaccacggacagagac
tccggaaccaacggagacatgcgcgtgagtctgagcggacacgagcattttaaactcaag
caggcgtacggcgacacatttatgatcgtcacaacggctcctttggacagagaaaagatt
cccgaatacaacatgactgtagttgcagaagatttaggttctccaccttttgtcacatcg
aggcgatacaccatcaaggtaagcgacgaaaacgacaacgcaccgcagttcagtaaacca
gtgtatggcatttccttcatggaaaataaagaaccaggttcttatgttgcaactttagtc
gcacgtgatttagatgacggtgcaaatggacaagtaacatacaaacttattgacaaggac
atcgaaggagctcccctaagctcttatgtctcagtacaccccatttctggctctttgtac
acactacagtctttggattacgaatatctgaagcaaatcgaagtgggtattgtagctagt
gatggaggctcgactcctcggtcaagcaccgcgatcgtaaaagtcaaagtagtggatgaa
aatgacaatgctccttttatcacccaccccgttttgatcaacggcgctgcagatgtgcct
ctgtcccacaatgctcctgccggttacattgcggtcacggtcaaagcccacgacttggac
ggcggtgtgaacagcaagctttctttcagcctgctggaagacaacgagaggatgtttttc
ataaacaaaactacaggtgtgatcgcattgaaacacagtctaagccacaagcaaggggac
actttggagattaaagtgatggtcaccgatggagggaggacacctttttcatgcaccgcc
actttacgctttgtggtcacggatgaagagctgtttgatgaacatttggtcgtgtctttt
gaaatgactgatgttgaaagaagcggagaagagaagacaaacctcgaagcttcttttatt
attataattcttctcggggccggttgcgcctttttgttggttgctattattgcggtggcc
ttctcacacagacgcggacaaagagagactccctttaggaagaataatggattagagagc
acttttgtgagatctccggtctcagcaaacagcacagactcatccgattccggcagttgc
cgcgaatctggtgctacgctcagcgagcagttgacttctaccagagatgattcatcttac
gaggagcaaagtcaagattcggacagcaagctgttccgccccctcctgaagaggaccaat
ttagattctgttgccatgtggcacgatgacagacaaagccatcatataagcaggaaccct
tccatcgatcaaacaagcatgaaggacagcgggaaaggtgatagcgacatcccagatagt
gactccaatatcagcggtgacgcggtccagagaacttctagcagtggacatcggcaagct
acgaatccagtgtattccgcacctatggttggaaagtgccaggcaacaaaggagatttca
acaactcacagctccaatgttgccagtagcggttacaaaatagcataccggacatcaatg
tgcaactaccattcagccaatcatagtgtttcaacctggagaaactatgactatatcccc
tcagccctacccagagcacccgaacaatttcgagaccctgcgtgtcacagattttaccat
cacaacccctattcatatatgggaggagcaccactaatgacttcagaggtcacatcatct
gcgactgctttttaa
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