Triplophysa dalaica: 130407055
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Entry
130407055 CDS
T09616
Symbol
usp11
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130407055 (usp11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130407055 (usp11)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130407055 (usp11)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130407055 (usp11)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130407055 (usp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
ABC_N
CoiA_N
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
130407055
NCBI-ProteinID:
XP_056585677
LinkDB
All DBs
Position
18:2839600..2852024
Genome browser
AA seq
1002 aa
AA seq
DB search
MMAANGGTDSATEPPGLETQRREIENLNRNQQLRAGDSWYLLEKRWYDQWKEYVDTGDQN
SSSYPGKIDNAELFEDLDSYHLKERLAENEDFVLLPAEAWHRLLSWYDMTDDQPALERKV
IDLPSTVKVEIYPVEVHLCLFSNLENTVFAQFSRADKIHAIQQHIQQQFKVSESSECRLW
MRNTDTSSERLRNLNMTVLDACLSSGMTVIMEIRNADGTWPTSRPQIMRNCTEDQDSYRG
SPGVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYAD
VVKQMWSGRHFSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY
IELRDADGRPDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECRKVSVTFDPFCYL
SVPLPVSKERVLEVFYVSLDPMAKPTQYRLTVPKAGRIFDLCSALTQATDVPPNQMAVAD
VFNHRFYRVFRPDESLSCILDRDDIFVYELSSGILDQGSEEVLLAVYMRERSHYRDYGSG
SNSYGTSLFGHPLLMSISRTRCTRDDLYELFRERLTRYVRPLDPSEEVEEEEEDEDEEEE
EEEEEELYTAQTNGVRDDEVEEDLKEAGSSKKEEEKPETAQTEGHSSGQLEASPNSEGEE
RAEDESSSEQDRGSSTEEAQSACGSTDTISQDATDGDQGAGAEPSGKEEEEEEDGEGAAA
YSKPNTRPVGRRRCAEKPKKALFTIQMVNSNGTTERGTADVDGSFSFSSLTYIAIDWDPD
MKKKYYNENEAEKYIKHPSMDIPHQQTVVQLQECIELFTTVETLEEENPWYCPMCKKHQL
ATKKLDLWSLPEVLIIHLKRFSYTKYSREKLDTVVDFPLRGLDFSDFLLKKTVNSDDPPC
TYDLISVSNHYGGLRDGHYTSYARNKDNGQWYYFDDSKVTIAREEQIMTNAAYLLFYQRQ
DKIRQPSVPPPEPSTTQPVNHITAQTPDDVDGNSSCVSMETD
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctaacggcggcaccgattcggccaccgaacctcccggactagagacccag
cggcgggagatcgagaacctgaaccggaaccagcagctgcgggctggggacagttggtat
ttgttggagaagagatggtatgaccagtggaaagagtatgttgacaccggggaccagaat
tcctcctcttatccgggaaagattgataacgctgagctttttgaagatttggattcatac
cacctgaaggaacgactggcggagaatgaagactttgtcttgctcccggcagaagcttgg
cacagactgttgtcatggtatgacatgacggatgaccagcctgccttagagagaaaggtc
attgaccttcccagcactgtcaaagtagagatctaccctgtggaggtccacctctgtctc
tttagcaacttggagaacactgtgtttgcgcagttcagtcgtgcagacaaaatacatgcc
atccagcaacatatacagcaacagtttaaagtgtccgagtcctctgagtgtcggctgtgg
atgagaaatacggatacaagttctgagaggttacgcaaccttaacatgacagtcctggac
gcctgtctcagctctggcatgacagtgattatggagataaggaatgccgatggtacgtgg
ccaacttccagacctcagatcatgaggaactgtactgaagatcaggactcgtatcgaggg
tctcctggagtgtgcggccttaccaacctgggcaacacctgcttcatgaattcagcccta
cagtgtctgagtaacacgccgccactgaccgagtacttcttgaagaacctttatctggag
gagctgaactttagcaacccactgggcatgaagggagagatcgcagaagcctacgctgat
gtcgtcaaacagatgtggtcagggaggcatttttcggtggttcctcgggtgtttaagact
aaggtgggccactttgcatcacagttcctgggttaccagcagcacgattctcaagaactt
ctgtccttcctgctggacggtcttcatgaagacctcaaccgggtgaaaaaaaaggagtat
attgagctgagggatgcagacggcagacctgaccaggaagtagctgaggaggcgtggcgc
aaccacctgagacggaacgattcagtcatcgttgacacattccacgggttgttcaagtca
acactagtgtgcccggagtgccgcaaggtctctgtgacctttgaccccttttgctacctg
agcgtgccgttacctgtcagtaaagaaagggttttggaggtgttctatgtctcgctggat
cctatggccaagccaacacagtatcgcttgaccgtccctaaagctggccggatatttgat
ttgtgctctgcactcacgcaggcaaccgacgtcccacccaaccagatggctgtggctgat
gttttcaatcaccgattctacagggtttttcggcccgatgagtccttgagctgtatattg
gaccgggatgacatatttgtgtacgagttaagcagtggtattctggatcagggcagtgag
gaggtgcttttggccgtctacatgcgcgagcgctctcactacagagattacgggtcagga
agcaacagctacggcacgtccctgttcggtcacccgctgctgatgtccatatcgcgcaca
cgatgcacaagagatgatctatatgagctcttccgtgaaagactaacgcggtatgttcga
ccacttgacccttcagaagaagtagaagaggaagaggaagatgaggatgaggaagaggaa
gaggaagaagaagaagagttgtatacggctcagaccaatggagttcgtgatgatgaggtt
gaggaagatttgaaggaggcggggtcttcaaagaaagaggaagaaaaaccagagactgct
caaactgaaggacacagcagcggccaattggaagccagcccgaacagcgagggggaggag
agagcggaggacgagtcaagtagcgaacaggaccggggcagcagtacggaggaggcccaa
tcagcatgcggcagcaccgacaccatttcccaagatgcaactgacggggaccaaggtgct
ggagcggaaccttctggaaaggaggaagaggaggaggaagatggagaaggtgcagcagca
tactctaaaccaaatacgagacctgtgggaagacggcgatgcgctgaaaaacccaagaaa
gccctctttaccattcagatggtaaactcgaacggtaccacagagcgaggaactgcggat
gtggatggcagcttctcttttagctctctgacatacatcgccattgactgggaccctgac
atgaagaagaaatactacaatgagaacgaggccgagaaatacatcaagcatccgagtatg
gacatccctcaccagcaaaccgtagtgcagctacaggaatgtatagagctctttaccacg
gtagagacactggaagaggaaaacccctggtactgcccaatgtgtaagaaacatcagctt
gccactaagaaactggatctgtggtccttgccagaggtgctcatcattcatctaaagcgt
ttctcctacacaaagtactcgagagagaaactggataccgttgtggattttcctctgcgg
ggtttggacttctcagattttctcctgaagaaaacagtcaacagtgatgatcctccctgc
acgtatgacctgatctctgtgtcgaaccactacggcggactcagggacggacactatact
agttatgcccggaacaaggacaacggccagtggtattactttgatgatagtaaggtgacc
attgcaagggaggaacaaatcatgaccaatgccgcctacctcctgttctaccagcgccaa
gacaagatccgtcagcccagcgtccctccgcccgagccctcaaccacccagccagtcaac
cacattactgcacagacccccgatgacgttgacggaaactcttcctgtgtcagcatggag
acggactga
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