Triplophysa dalaica: 130407246
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Entry
130407246 CDS
T09616
Name
(RefSeq) nephrocystin-4-like isoform X1
KO
K16478
nephrocystin-4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130407246
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
130407246
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GFIT
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NCBI-GeneID:
130407246
NCBI-ProteinID:
XP_056585983
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Position
18:complement(7793326..7914597)
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AA seq
1418 aa
AA seq
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MSQWKEVFERNRVIPPHSQTARQARVSSQGLKLVFKQIDGLHVEQSEESHAQGCQLQVTL
YDSGHQHFFGRTWKSGSHSVSGTVGQPGRVLFNEVVYFHTSLCLSSVVAVVELVSLSPKT
DGSQNAVGSGFGLLQLFTGHVDGSFSQGEGRMSFFSGTPRALLHPAMKDPQQLNAMLSPI
DGCQLLYTIKPHPALTPIMHLLPPNTLVSGHEGIPGVVPDSTADALRKPRLLNSFSCILE
AVSVTLFPSVEVFETDLLQLLNQDCQNTNRGSEGRSVVVQERRLLVGVHNGWGWVEKPQV
LVLEREAVGSVTAGARGAGTGGSFRQTSKEKFNDRLCLRGSVELKLMRHSAFSIVFQLQH
VFSCPLAGDGQMTSSAMPRAAFMHCVCWCVWSLFSDPEGPVENMCLNLQNGAVPNPWGVM
VYSSNTQQLNAGKSAIKFKFSSSVESSVSKASKVNPWETTPPKKFFSASQDENVLEPTAS
TAQSPRGPALSLSQLAMTSRYPTMSHTVGSPWQQQIPSLLSPSPMASAHQLSHVERLGAG
SIAHLELSVQEREGERSEDEGEIRELTFNPVHAPVITLGTHAAGSSKLTSRRSLAQLFSS
GFPQILDQQNQVAEVLDSSEPVNFDPKREEADPLQANTLILQFLAFTRVPQSGVHSDWPS
SVHFTFQLYRFPPVTTERLKLLDPQRNSRISGKSTSDSPCVLSLINKDGTLSSGCPGLQL
QYRVDPQFLKPGERVWFLRYLALHSLQIDVWDSESLLLIGSTAVELKHMLRQGRAAVQVC
HELEVITTEYLQDPSCDGKHGAFPPVNVYTTVKGILHLRLGNVGGSVSSSKSSLALPPSH
SHVVQPSDAARGLAGGSVPAFTVLKLNANNARRARRLPEIDSELARLLHSTMREVGGAIV
HKQGETEEVRQRKMDRMAAVRQHEEQGVPPPFQDNSNLTRHRTERLQHNRDLHVIEAYRQ
RCKAQEITNMLCQAITTKHTLYATLGTAEFFEFELNNPLNVPQTVTIECDDPELSVIVNS
EEWRYFKEMTLTLTPLEQEMFHQESTPRVYLRPNENVHIPFKYQTFLCGHALPSQDTKGL
KISRSQQMAKKHMSNTIQAKSIKVHFRGEDGKPLAICQVNVEPTPHVVDQTFRFYQPELT
FLKKAIRLPAAWDSTADGSATLHVRCSDPNVVCHTTTLTPGEPQDVFLKVPGCPSPQIRK
FFITIFTDPWLASPAQIWQVYVHYLQRMDLNCVCGTLDWHSLVLHGTQAIRRVKCYTSHS
LELQVDPGEVFALPGQGVQDVRVGVRALRPGSRFFYLNVVDVDTRQLVGSWLLCITCRQP
VIAKAFEIKVPVDGGKGSNKKISFTNPYSSPRVFKLSTDHPDLLMFKEEQFQIRGGEIYT
IGLRFAPTQNPGTEEILIFINDQQDKNEDTYCVRVQYK
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtggaaagaggttttcgaaagaaaccgtgtgatcccacctcacagtcaaact
gcccgacaagctcgagtatcttctcaaggcctcaagctggtcttcaagcagatcgatgga
cttcacgtagaacagtcagaggagtcccatgcacaagggtgtcagctgcaagtgaccttg
tacgactcgggtcaccagcacttctttggacgcacgtggaagagcggctcacactctgtc
agtggcacagtgggtcagcccggtcgagtgctcttcaatgaggtggtttacttccacact
tctctttgtttgagctctgtggtggcagtggtagagctggtgtctctctctcccaagaca
gatggatcccagaatgcagtggggtcagggttcggactcctccagctcttcacaggtcat
gttgatggcagcttctctcaaggggagggcaggatgagttttttcagtgggacccccaga
gccctcctgcacccagcaatgaaagaccctcagcagttgaatgccatgttatcaccgata
gacggctgtcagctgctatacacgattaagccacacccagccctcactcccatcatgcac
ctgctcccacccaacaccctggtgtctggacatgagggcatccccggtgtggtgccagac
agcacagcagacgcgctgcggaagcctcgtctgttgaacagtttctcgtgtattttggag
gctgtgagtgtgacacttttcccctctgtggaggtcttcgaaactgacctgctccagctg
ctcaaccaagactgccagaatacaaacaggggttcggagggacgctccgttgtggtgcag
gaacgcaggctgctggttggggtccataatggctggggttgggtggagaagcctcaggtg
ttggtgcttgagcgtgaggccgtagggagcgtaacggccggggcccgcggagccggcaca
ggcggcagcttcagacaaacttccaaggaaaaattcaatgatagactgtgtcttcgtggc
agtgtggagctgaagttgatgagacactcagctttcagcatcgtcttccagctccaacat
gttttctcttgtccgctggctggagatgggcagatgacatcatcagccatgcccagagca
gcattcatgcattgcgtgtgttggtgtgtttggagtctgttttcggatcctgagggcccc
gttgagaacatgtgcctcaacttgcagaatggtgctgtccccaacccttggggtgtcatg
gtgtactcctcaaacacacagcagttgaatgcagggaagagtgccatcaagttcaagttt
tcatctagtgtggaaagttctgtcagcaaagcgtcaaaagtgaacccatgggaaacaacg
ccacctaagaagttcttttctgcatcccaagatgagaatgtcctcgagccgacagcttcg
acagcgcagtctccccgtggcccagccctgtctctctctcagcttgctatgacttcacgg
tacccgaccatgagccacactgtggggtctccatggcaacaacagatcccctctcttctc
tctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgtctaggtgccggc
agcatagcgcacttggagctgagtgtacaggagagagagggggagagaagtgaggacgag
ggcgagatacgggaactgaccttcaacccggtgcacgcccctgtcattaccctcggtaca
catgctgcaggctcctctaagttgacctctcgcagatctctggcccagctcttctcctcg
ggtttccctcagattctggatcagcagaaccaggtggctgaggttctggattcttccgag
cctgtgaactttgaccctaagagagaagaagcggatcctcttcaggccaacactcttatt
ctgcagttcctagcctttaccagggttcctcagagtggtgtgcactcagactggccgagt
tctgtacattttaccttccagctttaccgattcccccccgtcaccactgagagactgaag
ctgcttgacccgcaaaggaacagcaggatcagcgggaaatccacctctgattccccctgt
gtcctttctcttatcaacaaagatggcacactaagctctggttgtcctggtctgcaactg
cagtacagagtcgacccacaattcctgaagccgggtgagcgggtgtggttcttgcgatac
ctggcgcttcattcccttcagattgatgtctgggacagcgagtcattattgctgattggc
tcaaccgccgtagagctgaagcatatgctccggcagggccgtgcggccgtccaggtgtgc
cacgagctggaagtgatcaccaccgagtacctacaggatcccagctgtgacggcaagcac
ggggcctttccacccgtaaatgtctacaccaccgtgaaaggaattctgcatctgcggctt
ggcaacgtcggtggcagtgtatcaagttccaaaagttccttggctcttcctccatcacat
tcccatgtggtccagcccagtgatgccgctcggggtttagcgggaggaagtgtcccggct
tttacggtcctcaagcttaacgcaaacaatgccaggcgagcgcgccgcttgccagaaatc
gacagcgagctggccagactgctccacagcaccatgagggaagtgggcggagccatagtc
cacaagcagggcgaaacggaggaagtgcgccagaggaagatggatagaatggcagctgtc
cgtcaacacgaggagcagggggtcccgcctccttttcaggataattcaaacctcacgagg
cacagaacagagcgtctgcaacataatcgtgatctacacgtgatagaagcctatcgtcag
cgctgtaaagcacaggagatcaccaatatgctctgccaagccattaccaccaaacacact
ctttacgccacactgggaacagctgagttcttcgaatttgagctgaataatccattgaac
gttcctcagacagtaactattgagtgtgacgatccagaactcagtgtaatcgtgaacagt
gaggaatggagatattttaaggagatgacgttgacgctgacacctctagagcaggagatg
tttcaccaggagagcacaccacgggtttacctgcgacccaatgaaaacgtccatatccca
tttaagtaccaaaccttcctatgtgggcacgccctcccttctcaggatacaaaaggctta
aagatttcaagaagtcaacagatggctaagaaacatatgtccaacaccattcaagcgaaa
tccatcaaggttcatttccgtggggaggatggaaagcctctggcgatctgccaggtgaat
gttgaaccaacgccacatgtggtggaccagacctttcgtttctaccagcctgaactcacc
ttcctgaagaaagccatccgcctgcctgcggcctgggacagcacagcagatggttccgcc
acccttcatgtgcgctgcagcgaccccaatgtcgtctgccacaccaccaccttgactcca
ggagaaccgcaagacgtatttctgaaagtacctggttgtccaagtccacaaattaggaaa
ttcttcatcactattttcactgacccctggctggcctcccctgcgcagatatggcaggta
tacgtgcattacctgcaaaggatggacctaaactgtgtgtgtggcactctcgactggcat
tcgctggttttgcatggcacgcaagccatccggagggtcaagtgttatacgtcgcattcc
ctggagcttcaggttgatccaggggaagtttttgctctgcctggtcagggtgtgcaggac
gtccgtgtgggcgtgagggccctgcgccctgggagtcgtttcttttacctcaacgtggtt
gacgtggacacacggcagcttgtcggctcctggctgctgtgtattacatgcaggcaacct
gtgatcgcaaaggcgtttgaaatcaaagtccctgttgatggaggaaagggcagcaataag
aaaataagtttcaccaacccgtactctagccccagagtattcaagctgagcacagaccac
ccggaccttcttatgtttaaagaggaacagtttcagatcagaggaggggagatctacacc
atcggtcttcgcttcgctccaactcagaatcccggtacagaagagattctcatcttcatc
aatgaccaacaggataagaacgaggacacgtactgcgttagagtccagtacaaataa
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