Triplophysa dalaica: 130407486
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Entry
130407486 CDS
T09616
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
tdw
Triplophysa dalaica
Pathway
tdw04210
Apoptosis
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130407486 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130407486 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130407486 (sptan1)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130407486 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
130407486 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
130407486
NCBI-ProteinID:
XP_056586352
LinkDB
All DBs
Position
19:4893989..4920585
Genome browser
AA seq
2500 aa
AA seq
DB search
MDVSGVKVLESADDIQDRRQQVLDRYRRFKELSTVRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMITEGHFAAETI
RTRLEELHRLWDLLLQRTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQAAGKLTQEDHPEAELILKKQEEVNAAWQRL
KGLAQQRQAKLFGSAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEADRLQQTHPQNASQIHLKRDELITNWEQIRTLAAERHTRLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKST
DEAGQALLNTGHYASEEVKEKLGILSEEKVSLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQFRRTSLEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELVDRKHYATTEVSTRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDFGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQAKQFQEAGHFDADNIRKKQEAMVARYEALKEPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMVDEGHFAAEDVKAKQQELHNRWDGLKGKAAQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSILALKEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEQGSIALRQEQIDNQTVATKEACSVSVRMKQVEELYGTLIDFG
EKRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPVVQAQQQEVLGSAPGKDEADKGASPWKSVRLA
VQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELN
TAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDQERADLEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLVSADHYAKPDIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTG
NALIQRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMVSSAFDTS
QVKDKRDAVNGRFTKIKSMAGGRRSKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYG
RDLTGVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLAQFVEHWK
ELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVNDVCSNGDELIKKENHHVENIVAKMTALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAEADFSQLAEL
DRQIKSYQVSSNPYTWFTMNALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGIAYRRVIRVYQYEVDDDLSGRSCMVEESGTLESQLEATKRKH
QEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQI
QARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFE
SILDIVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPFVTKEELYQN
LSKEQADYCISHMKPYLDGKGREIPSAFDFVEFTRSLFVN
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagtggagttaaagttctggagtcggctgatgacatccaggaccgccgtcag
caagttctggaccggtaccgacgcttcaaagagctgtccactgtgcgcaggcagaaactt
gaggattcgtaccgtttccagttctttcgtcgggatgcagatgagctggagaaatggatc
caagagaagctacagattgcttctgatgagaactacaaggaccccagtaacttacaggga
aagctccagaaacatcaagcgtttgaggcagaggtgcaggccaacgccggggccataatc
aaactggatgagaccggcaacctcatgataacggagggccactttgcagctgaaaccatc
cgaacccgtctagaggagctacatcgtctgtgggatctgctgctgcagaggacaaaggag
aagggagtgcgtctcctgcaggcccagaagctggtgcagtacctgcgtgagtgcgaggat
gccctagactggatcagcgacaaggaagctatcgtcacctcagaggaacttggtcaggac
ctggagcatgtggaggttctgcagaaaaagtttgaagagttccaaacagacttggcggct
cacgaggagcgtgtgaatgaggtgaaccaggcagccggtaagctaacccaggaggaccac
ccagaggccgaactcatcctaaagaagcaggaggaggtgaacgctgcctggcagaggcta
aaaggattggctcagcagcgacaggccaagctgtttgggtctgctgaggtgcagcgtttt
aaccgggatgtggatgagacaatcagctggatcaaggagaaggagcaactgatggcgtct
gatgattttggccgtgaccttgctagtgttcaagctctgctgaggaaacacgaggggctg
gaaagagacttggctgccttggaggacaaggtgaacactcttggtggtgaggcagaccgt
ctgcagcaaacacatccccagaacgcctctcagatccacctgaagagagatgaactcatt
accaactgggagcagatccgcacattggctgcagagcgtcacacccgcctcaacgactcc
tacaggctgcagcgattcactgcagatttcagggaccttacaagctgggtgaccgagatg
aaggctttgatcaatgcagatgaactggccaacgatgtggccggagccgaagctctcctc
gaccgccaccaggagcataagggtgagattgacgctcacgaggacagttttaaatctacc
gatgaggcaggccaagctctgctgaatacgggacactacgcctccgaggaggtcaaagaa
aaactgggcatcctgtctgaagagaaggtgtctcttctggagctgtgggagctgcgcagg
cagcagtatgagcagtgcatggacctgcagctcttttacagggacacagagcaggtcgac
aactggatgagcaagcaagaggctttccttctgaatgaagatctcggagactctctagac
agcgttgaagcacttctgaagaaacacgaagacttcgagaaatccctcagtgcccaggag
gagaagatcactgccctggatgaatttgcaaccaaactgatccaaaacaaccattacgcc
aaggaggatgtggccacccgcagagatgcactgctgagcagacgcaacgcccttcatgag
cgtgctcagtttcgccgtacttccctggaggactctttccatctgcagcagtttttccgg
gactctgacgagctcaagagctggatcaatgagaagatgaagactgccactgatgaggcc
tacaaggacccatctaacctgcaggggaaggtgcagaagcaccaggccttcgaggccgag
ctctctgccaatcagagccgcattgacgcgctgcagaagtcaggccaggagctggttgat
aggaaacattacgccaccaccgaggtgtccacacgcatggatgaggtcagctcacagtgg
aagaaacttttggaagcaactgagcttaaaggcattaaattgcgtgaagccaaccagcag
cagcagttcaatcgtaatgttgaagacatcgagctgtggttatatgaggtggagggacac
ctggcctctgatgactttggcaaagacctgaccagcgtccaaaaccttcaaaagaaacat
gctttgctggaggcggatgtggcagcccaccaggaccgtattgatggcatcaccattcag
gccaagcagttccaggaggccggccatttcgacgctgataacatccgtaagaaacaggag
gctatggtggcacgttatgaggcccttaaggagcccatggctgctcgtaagcagaagctg
tcagactctttgcgcctccagcagcttttcagagatgtggaggatgaggagacctggatc
cgagaaaaggaacccatcgcttcctctacaaacagaggaaaagaccttattggagtgcag
aaccttctgaagaagcaccaggccctacaggcagagatttccggtcatgagccccgtatc
aaggctgtcacgcagaaaggcgaggccatggtggatgagggtcactttgcagcggaggat
gtgaaagctaagcaacaggagctacacaaccgctgggatgggctgaagggaaaagcagct
cagcgcaggcaagatctggaggactctctgcaggcccagcagtactttgctgatgcaaat
gaggctgagtcctggatgagagagaaagagcccatcgtgggaagcaccgattatgggaag
gatgaggactctgcagaggctctgctgaagaaacacgaggcgttgatgtctgatctgagt
gcatatggaagcagcatcctggcccttaaagaacaggctcaggcctgcagacaacaagtg
gcccccactgacgatgagactggtaaggagctggttcttgctctgtacgactatcaggag
aagagtccacgtgaggtcaccatgaagaagggtgacatcctcacgctgctcaacagcacc
aacaaggactggtggaaagtggaagtgaatgacagacagggctttgttcccgcggcgtat
gtgaagaagttggacccgactcagtcatcctctcgtgagaatctgctggacgaacaaggc
agcatcgctctccgacaggaacagattgataatcagactgtagccaccaaggaggcatgc
agcgtgtctgtgcgcatgaagcaggtggaggaactgtatggtactctgatagattttggt
gagaagaggaaggacatgctggagaagagttgcaagaagttcatgcttttccgcgaggcg
aacgaactgcagcagtggatcaatgagaaagagtcagctcttaccaacgaagaggtcggc
tctgatcttgagcaagtggaagtcctgcagaagaagtttgatgacttccagaaggatcta
aaagcgaatgagtctcgtctgagggacataaacaaggtggcttcagagctggagtctgaa
gggctgatggcagaggaagctccagttgtacaggcccagcaacaagaggtgctgggttca
gctcctggcaaggatgaagcagacaaaggtgcatctccttggaagtctgttcgattggct
gttcaaacaacggccaactttaatactataaaggagcttaacaaccgctggaggtctctg
cagcagctggccgaggacagaagcaacatgttgggcagtgctcatgaggtgcagaggttc
cacagggatgcggatgagaccaaggaatggattgaagagaagaatcaagccctgaacacc
gataactacggtcatgatctcgccagcgtgcaggctctgcagcgtaagcacgagggcttt
gagagagacctggctgctttgggtgacaaggtgaactctctgggggagactgccgagcgt
ctgattcagtctcatcctgaagcggtggatgacattcaggagaaatgcaccgagctgaac
acagcctggagcagccttgtgggacgcgccgaccagcgcaaagaaaaactgggcaactcg
catgatctgcagcgattcctcagtgacttcagggatctcatgtcctggatcaatggaatc
agagggctggtgtcttctgatgagttggccaaggatgtcactggagctgaagctttgctg
gagagacaccaggagcaccgcactgagattgatgcccgtgcaggcaccttccaggccttc
gagcagtttggacagcagctgctcgctcgtggccactacgccagccctgagatccagcag
aagctagaggctctcgatcaggagcgggccgacctggagaaggcctgggtccagcgcaga
atgatgctggaccaatgtcttgagctgcagctgttcaaccgtgactgcgagcaggctgaa
aactggatggcagcacgtgaggctttcctggccagtgatgataagggcgactccttggac
agcgtagaggctctcatcaagaaacatgaggactttgacaaagccatcaatgtccaggag
gagaagatcgcagccctacagtcttttgcggatcagcttgttagcgctgaccattacgcc
aagcctgacattttcaaccggcgcaatgaagtcctggacaggtggcgccgtctgaaggct
cagatgattgagaagcgttccaaactgggcgagtcgcagactctgcagcagttcagcaga
gacgtggatgagatcgaagcgtggatcagcgagaagctccagaccgccaccgacgagtct
tacaaggacccgacaaacatccagctgtccaaactgctgagcaaacaccagaagcaccag
gcttttgaggctgaattacacgctaacgctgatcgtatccggggggtgatagacacgggc
aatgctctcatccagagaggtgcctgtgctggaagtgaggatgccgtcaaggctcgtctg
aatgctctggatgagcagtggcagttcctcgtcaacaaatctgcagagaagagtcagaaa
ctgaaggaggcgaacaagcagcagaacttcaacactggcatcaaggactttgacttctgg
ttgtctgaggttgaggctcttcttgcctctgaggactatgggaaagatctggcctcggtc
aacaatctacttaagaagcaccagcttcttgaggccgacatctctgctcatgaggaccgt
ctgaaagatctcaacggccaagctgacagcctgatggtcagcagcgctttcgacacctct
caagtcaaggacaagcgtgacgctgtgaacggccgctttaccaagattaagagcatggcc
ggtggacgccgttccaagctgaacgagtcgcatcgtctgcatcaattcttcagggacctg
gatgatgaggagtcttggataaaggaaaagaagctgttggtgagctcggaggattatgga
cgtgatttgacaggagtacagaatctgaggaagaaacataagaggctggaggcggagctt
ggagctcatgagccagccattcagtctgtgttggaaactgggaagaagctgtctgatgac
aacaccatcggacaggaggagatccagcagaggctggctcagtttgtggagcattggaag
gagctgaaggatttggctgctgcccgtgggcagagactagaagagtcactggaatatcag
cagtttgttgcgaatgtcgaggaagaggaagcctggattaatgagaaactgaacctggtt
ggaagtgaggattacggagatacgttggcagctgtgcagggcttgttgaagaagcatgaa
gcatttgagacagattttactgtgcacagggatcgagtcaatgatgtgtgttcaaatgga
gatgaactcattaagaaggagaatcaccacgtggagaacatcgtggctaaaatgacggcc
ctgcgtgggaaggtatcagagctggagagagctgccgcccagaggaaggccaagctggat
gagaactctgccttcctgcagttcaactggaaggctgatgtggtggagtcctggatcggt
gaaaaggaaaacagcctgaagacagacgactacggtcgtgatctgtcctctgtgcagacg
ctgctcaccaaacaagaaacctttgacgctggtctacaggccttccagcaggagggcatc
accaacatcacagccctcaaagaccagctgctcgctgccaaacacgtgcagtctaaagcc
atcgaggctcgtcatgccaccctcatgaagcgctggaaccaacttctgtcgaactcagct
gcccgcaagaagaagctcctggaggcccaggagcacttcagaaaggtcgaggatctgttc
ctcacttttgccaagaaggcttcggccttcaacagctggtttgagaatgctgaagaggat
ctgaccgaccccgtcaggtgcaactctctggaggagatcagggccctgcgagacgctcac
gatgcattccgctcatctctgagctcagcggaggccgactttagccaattggcagagctc
gatcgccagatcaagagttatcaagtgtcatccaacccgtatacctggttcaccatgaat
gcgctagaggagacctggaggaaccttcagaagatcattaaggagcgtgagctggagctg
cagaaggaacagaggaggcaagaggaaaacgataaactcagacaggagtttgcccagcat
gccaatgccttccaccagtggctacaggagaccaggacatatctactggatggcatagcc
tatcggagggtaatccgtgtctatcagtatgaagtcgatgatgatctttccggaaggtcc
tgcatggtggaagaatccggcactttagagtcccagctagaggctactaagcgcaagcac
caggaaatccgtgccatgcgcagccagctaaagaagatagaggacctgggagcagccatg
gaggaggcactgatcctggacaacaaatacacagaacacagcacagtcggtctggcccaa
cagtgggaccaacttgaccagctgggcatgagaatgcaacacaacctggaacaacagatc
caagccagaaacacaacaggagtaacagaagaggccctgaaggaattcagcatgatgttc
aagcacttcgacaaagaaaaatctggacgtcttaatcaccaggagtttaaatcctgcctg
cggtctctggggtacgacctgcccatggttgaagaaggtgaaccagacccagagtttgaa
tctatcctggacatcgtagatcccaacagggatgggaacgtgtccttgcaggagtacatg
gccttcatgatcagccgagaaacagagaatgtgaagtcaagcgaggagattgagagtgcc
ttccgtgctctcagtgccgagaacaaacctttcgtcaccaaggaagagttataccagaac
ttgtccaaggaacaagcagactactgcatttcccacatgaagccctacctggacggcaag
ggtcgcgaaatcccatcggcattcgacttcgtggaattcacccgctcattatttgtcaat
tga
DBGET
integrated database retrieval system
