Triplophysa dalaica: 130407486
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Entry
130407486 CDS
T09616
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
tdw
Triplophysa dalaica
Pathway
tdw04210
Apoptosis
tdw04517
IgSF CAM signaling
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130407486 (sptan1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130407486 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130407486 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130407486 (sptan1)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130407486 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
130407486 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
130407486
NCBI-ProteinID:
XP_056586352
LinkDB
All DBs
Position
19:4893989..4920585
Genome browser
AA seq
2500 aa
AA seq
DB search
MDVSGVKVLESADDIQDRRQQVLDRYRRFKELSTVRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMITEGHFAAETI
RTRLEELHRLWDLLLQRTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQAAGKLTQEDHPEAELILKKQEEVNAAWQRL
KGLAQQRQAKLFGSAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEADRLQQTHPQNASQIHLKRDELITNWEQIRTLAAERHTRLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKST
DEAGQALLNTGHYASEEVKEKLGILSEEKVSLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQFRRTSLEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELVDRKHYATTEVSTRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDFGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQAKQFQEAGHFDADNIRKKQEAMVARYEALKEPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMVDEGHFAAEDVKAKQQELHNRWDGLKGKAAQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSILALKEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEQGSIALRQEQIDNQTVATKEACSVSVRMKQVEELYGTLIDFG
EKRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPVVQAQQQEVLGSAPGKDEADKGASPWKSVRLA
VQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELN
TAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDQERADLEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLVSADHYAKPDIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTG
NALIQRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMVSSAFDTS
QVKDKRDAVNGRFTKIKSMAGGRRSKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYG
RDLTGVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLAQFVEHWK
ELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVNDVCSNGDELIKKENHHVENIVAKMTALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAEADFSQLAEL
DRQIKSYQVSSNPYTWFTMNALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGIAYRRVIRVYQYEVDDDLSGRSCMVEESGTLESQLEATKRKH
QEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQI
QARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFE
SILDIVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPFVTKEELYQN
LSKEQADYCISHMKPYLDGKGREIPSAFDFVEFTRSLFVN
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagtggagttaaagttctggagtcggctgatgacatccaggaccgccgtcag
caagttctggaccggtaccgacgcttcaaagagctgtccactgtgcgcaggcagaaactt
gaggattcgtaccgtttccagttctttcgtcgggatgcagatgagctggagaaatggatc
caagagaagctacagattgcttctgatgagaactacaaggaccccagtaacttacaggga
aagctccagaaacatcaagcgtttgaggcagaggtgcaggccaacgccggggccataatc
aaactggatgagaccggcaacctcatgataacggagggccactttgcagctgaaaccatc
cgaacccgtctagaggagctacatcgtctgtgggatctgctgctgcagaggacaaaggag
aagggagtgcgtctcctgcaggcccagaagctggtgcagtacctgcgtgagtgcgaggat
gccctagactggatcagcgacaaggaagctatcgtcacctcagaggaacttggtcaggac
ctggagcatgtggaggttctgcagaaaaagtttgaagagttccaaacagacttggcggct
cacgaggagcgtgtgaatgaggtgaaccaggcagccggtaagctaacccaggaggaccac
ccagaggccgaactcatcctaaagaagcaggaggaggtgaacgctgcctggcagaggcta
aaaggattggctcagcagcgacaggccaagctgtttgggtctgctgaggtgcagcgtttt
aaccgggatgtggatgagacaatcagctggatcaaggagaaggagcaactgatggcgtct
gatgattttggccgtgaccttgctagtgttcaagctctgctgaggaaacacgaggggctg
gaaagagacttggctgccttggaggacaaggtgaacactcttggtggtgaggcagaccgt
ctgcagcaaacacatccccagaacgcctctcagatccacctgaagagagatgaactcatt
accaactgggagcagatccgcacattggctgcagagcgtcacacccgcctcaacgactcc
tacaggctgcagcgattcactgcagatttcagggaccttacaagctgggtgaccgagatg
aaggctttgatcaatgcagatgaactggccaacgatgtggccggagccgaagctctcctc
gaccgccaccaggagcataagggtgagattgacgctcacgaggacagttttaaatctacc
gatgaggcaggccaagctctgctgaatacgggacactacgcctccgaggaggtcaaagaa
aaactgggcatcctgtctgaagagaaggtgtctcttctggagctgtgggagctgcgcagg
cagcagtatgagcagtgcatggacctgcagctcttttacagggacacagagcaggtcgac
aactggatgagcaagcaagaggctttccttctgaatgaagatctcggagactctctagac
agcgttgaagcacttctgaagaaacacgaagacttcgagaaatccctcagtgcccaggag
gagaagatcactgccctggatgaatttgcaaccaaactgatccaaaacaaccattacgcc
aaggaggatgtggccacccgcagagatgcactgctgagcagacgcaacgcccttcatgag
cgtgctcagtttcgccgtacttccctggaggactctttccatctgcagcagtttttccgg
gactctgacgagctcaagagctggatcaatgagaagatgaagactgccactgatgaggcc
tacaaggacccatctaacctgcaggggaaggtgcagaagcaccaggccttcgaggccgag
ctctctgccaatcagagccgcattgacgcgctgcagaagtcaggccaggagctggttgat
aggaaacattacgccaccaccgaggtgtccacacgcatggatgaggtcagctcacagtgg
aagaaacttttggaagcaactgagcttaaaggcattaaattgcgtgaagccaaccagcag
cagcagttcaatcgtaatgttgaagacatcgagctgtggttatatgaggtggagggacac
ctggcctctgatgactttggcaaagacctgaccagcgtccaaaaccttcaaaagaaacat
gctttgctggaggcggatgtggcagcccaccaggaccgtattgatggcatcaccattcag
gccaagcagttccaggaggccggccatttcgacgctgataacatccgtaagaaacaggag
gctatggtggcacgttatgaggcccttaaggagcccatggctgctcgtaagcagaagctg
tcagactctttgcgcctccagcagcttttcagagatgtggaggatgaggagacctggatc
cgagaaaaggaacccatcgcttcctctacaaacagaggaaaagaccttattggagtgcag
aaccttctgaagaagcaccaggccctacaggcagagatttccggtcatgagccccgtatc
aaggctgtcacgcagaaaggcgaggccatggtggatgagggtcactttgcagcggaggat
gtgaaagctaagcaacaggagctacacaaccgctgggatgggctgaagggaaaagcagct
cagcgcaggcaagatctggaggactctctgcaggcccagcagtactttgctgatgcaaat
gaggctgagtcctggatgagagagaaagagcccatcgtgggaagcaccgattatgggaag
gatgaggactctgcagaggctctgctgaagaaacacgaggcgttgatgtctgatctgagt
gcatatggaagcagcatcctggcccttaaagaacaggctcaggcctgcagacaacaagtg
gcccccactgacgatgagactggtaaggagctggttcttgctctgtacgactatcaggag
aagagtccacgtgaggtcaccatgaagaagggtgacatcctcacgctgctcaacagcacc
aacaaggactggtggaaagtggaagtgaatgacagacagggctttgttcccgcggcgtat
gtgaagaagttggacccgactcagtcatcctctcgtgagaatctgctggacgaacaaggc
agcatcgctctccgacaggaacagattgataatcagactgtagccaccaaggaggcatgc
agcgtgtctgtgcgcatgaagcaggtggaggaactgtatggtactctgatagattttggt
gagaagaggaaggacatgctggagaagagttgcaagaagttcatgcttttccgcgaggcg
aacgaactgcagcagtggatcaatgagaaagagtcagctcttaccaacgaagaggtcggc
tctgatcttgagcaagtggaagtcctgcagaagaagtttgatgacttccagaaggatcta
aaagcgaatgagtctcgtctgagggacataaacaaggtggcttcagagctggagtctgaa
gggctgatggcagaggaagctccagttgtacaggcccagcaacaagaggtgctgggttca
gctcctggcaaggatgaagcagacaaaggtgcatctccttggaagtctgttcgattggct
gttcaaacaacggccaactttaatactataaaggagcttaacaaccgctggaggtctctg
cagcagctggccgaggacagaagcaacatgttgggcagtgctcatgaggtgcagaggttc
cacagggatgcggatgagaccaaggaatggattgaagagaagaatcaagccctgaacacc
gataactacggtcatgatctcgccagcgtgcaggctctgcagcgtaagcacgagggcttt
gagagagacctggctgctttgggtgacaaggtgaactctctgggggagactgccgagcgt
ctgattcagtctcatcctgaagcggtggatgacattcaggagaaatgcaccgagctgaac
acagcctggagcagccttgtgggacgcgccgaccagcgcaaagaaaaactgggcaactcg
catgatctgcagcgattcctcagtgacttcagggatctcatgtcctggatcaatggaatc
agagggctggtgtcttctgatgagttggccaaggatgtcactggagctgaagctttgctg
gagagacaccaggagcaccgcactgagattgatgcccgtgcaggcaccttccaggccttc
gagcagtttggacagcagctgctcgctcgtggccactacgccagccctgagatccagcag
aagctagaggctctcgatcaggagcgggccgacctggagaaggcctgggtccagcgcaga
atgatgctggaccaatgtcttgagctgcagctgttcaaccgtgactgcgagcaggctgaa
aactggatggcagcacgtgaggctttcctggccagtgatgataagggcgactccttggac
agcgtagaggctctcatcaagaaacatgaggactttgacaaagccatcaatgtccaggag
gagaagatcgcagccctacagtcttttgcggatcagcttgttagcgctgaccattacgcc
aagcctgacattttcaaccggcgcaatgaagtcctggacaggtggcgccgtctgaaggct
cagatgattgagaagcgttccaaactgggcgagtcgcagactctgcagcagttcagcaga
gacgtggatgagatcgaagcgtggatcagcgagaagctccagaccgccaccgacgagtct
tacaaggacccgacaaacatccagctgtccaaactgctgagcaaacaccagaagcaccag
gcttttgaggctgaattacacgctaacgctgatcgtatccggggggtgatagacacgggc
aatgctctcatccagagaggtgcctgtgctggaagtgaggatgccgtcaaggctcgtctg
aatgctctggatgagcagtggcagttcctcgtcaacaaatctgcagagaagagtcagaaa
ctgaaggaggcgaacaagcagcagaacttcaacactggcatcaaggactttgacttctgg
ttgtctgaggttgaggctcttcttgcctctgaggactatgggaaagatctggcctcggtc
aacaatctacttaagaagcaccagcttcttgaggccgacatctctgctcatgaggaccgt
ctgaaagatctcaacggccaagctgacagcctgatggtcagcagcgctttcgacacctct
caagtcaaggacaagcgtgacgctgtgaacggccgctttaccaagattaagagcatggcc
ggtggacgccgttccaagctgaacgagtcgcatcgtctgcatcaattcttcagggacctg
gatgatgaggagtcttggataaaggaaaagaagctgttggtgagctcggaggattatgga
cgtgatttgacaggagtacagaatctgaggaagaaacataagaggctggaggcggagctt
ggagctcatgagccagccattcagtctgtgttggaaactgggaagaagctgtctgatgac
aacaccatcggacaggaggagatccagcagaggctggctcagtttgtggagcattggaag
gagctgaaggatttggctgctgcccgtgggcagagactagaagagtcactggaatatcag
cagtttgttgcgaatgtcgaggaagaggaagcctggattaatgagaaactgaacctggtt
ggaagtgaggattacggagatacgttggcagctgtgcagggcttgttgaagaagcatgaa
gcatttgagacagattttactgtgcacagggatcgagtcaatgatgtgtgttcaaatgga
gatgaactcattaagaaggagaatcaccacgtggagaacatcgtggctaaaatgacggcc
ctgcgtgggaaggtatcagagctggagagagctgccgcccagaggaaggccaagctggat
gagaactctgccttcctgcagttcaactggaaggctgatgtggtggagtcctggatcggt
gaaaaggaaaacagcctgaagacagacgactacggtcgtgatctgtcctctgtgcagacg
ctgctcaccaaacaagaaacctttgacgctggtctacaggccttccagcaggagggcatc
accaacatcacagccctcaaagaccagctgctcgctgccaaacacgtgcagtctaaagcc
atcgaggctcgtcatgccaccctcatgaagcgctggaaccaacttctgtcgaactcagct
gcccgcaagaagaagctcctggaggcccaggagcacttcagaaaggtcgaggatctgttc
ctcacttttgccaagaaggcttcggccttcaacagctggtttgagaatgctgaagaggat
ctgaccgaccccgtcaggtgcaactctctggaggagatcagggccctgcgagacgctcac
gatgcattccgctcatctctgagctcagcggaggccgactttagccaattggcagagctc
gatcgccagatcaagagttatcaagtgtcatccaacccgtatacctggttcaccatgaat
gcgctagaggagacctggaggaaccttcagaagatcattaaggagcgtgagctggagctg
cagaaggaacagaggaggcaagaggaaaacgataaactcagacaggagtttgcccagcat
gccaatgccttccaccagtggctacaggagaccaggacatatctactggatggcatagcc
tatcggagggtaatccgtgtctatcagtatgaagtcgatgatgatctttccggaaggtcc
tgcatggtggaagaatccggcactttagagtcccagctagaggctactaagcgcaagcac
caggaaatccgtgccatgcgcagccagctaaagaagatagaggacctgggagcagccatg
gaggaggcactgatcctggacaacaaatacacagaacacagcacagtcggtctggcccaa
cagtgggaccaacttgaccagctgggcatgagaatgcaacacaacctggaacaacagatc
caagccagaaacacaacaggagtaacagaagaggccctgaaggaattcagcatgatgttc
aagcacttcgacaaagaaaaatctggacgtcttaatcaccaggagtttaaatcctgcctg
cggtctctggggtacgacctgcccatggttgaagaaggtgaaccagacccagagtttgaa
tctatcctggacatcgtagatcccaacagggatgggaacgtgtccttgcaggagtacatg
gccttcatgatcagccgagaaacagagaatgtgaagtcaagcgaggagattgagagtgcc
ttccgtgctctcagtgccgagaacaaacctttcgtcaccaaggaagagttataccagaac
ttgtccaaggaacaagcagactactgcatttcccacatgaagccctacctggacggcaag
ggtcgcgaaatcccatcggcattcgacttcgtggaattcacccgctcattatttgtcaat
tga
DBGET
integrated database retrieval system
