Triplophysa dalaica: 130407622
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Entry
130407622 CDS
T09616
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130407622 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130407622 (nup54)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130407622 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
130407622
NCBI-ProteinID:
XP_056586667
LinkDB
All DBs
Position
19:complement(75135..80052)
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AA seq
517 aa
AA seq
DB search
MAFNFGGPSSSASLSGTGFGAATTTASTGFGFGSSTTGAFGGFGATTAPPSSGSTFNFST
PSNTGGGLFGSTQNKGFGFSSGLASSGATGTGFSSTGLGFGGFGGIQSSQTQQGGLFNQQ
GSQSSHLINTASALSAPSVLSDERDSVLAKWNQLQAFWGTGRGYFNSSTPPVEFSQENPF
CRFKAVGYSCVPETKDEDGLVALALSKKESDVRSQQQHLVESLHKVLGGNQMITVNVEGV
RALPDDQTEVIVYLVERSPNGTSKRVPASTLYSFMEQMNVKSQLQQLSVIMTVSRTALSA
TQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQTR
VDIISNDISELQVNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLDEEHL
RVQLETIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIKQHLKQQ
QEGLSHLISVIKDDLDDIKMIEDQLHDGIHTRSSKLS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggcccgtctagcagcgcgagtctttctggcactgggtttgga
gccgccaccacaacagcatccactggatttggattcggatcaagtaccacaggtgctttt
ggaggttttggagccacgacggctcctcccagcagtgggtcgaccttcaatttctccaca
ccatcaaacacaggtggaggtctctttggaagcactcagaataaaggttttggcttctcc
tctggtttggcttcgagtggcgctacaggaacgggcttcagcagcactggattgggcttc
ggtggtttcgggggaattcagagcagccagacccaacagggtggtctgtttaaccagcag
gggtctcagtctagtcatctgatcaacactgccagtgccctgtctgctccatctgtgctc
agcgatgagcgggactccgttctggccaagtggaaccagctgcaggccttctggggaaca
ggccgaggttatttcaacagcagcactcctccagtggagttcagccaggagaatcccttc
tgccgcttcaaggcggtgggctacagctgtgttcctgaaacaaaagatgaagatgggtta
gtggctctggctctcagtaagaaggaatcagacgtgcgctctcagcagcagcacttggtc
gagtctctacataaagtcctgggaggaaatcaaatgatcaccgtgaatgtggagggtgtg
cgagcgttacctgatgaccagacggaggtgatcgtttatttggttgagcgttctcctaac
ggcacgtccaagcgggttccagcatcaactctctatagtttcatggagcagatgaatgtg
aaatctcagcttcagcagctcagtgtcataatgactgtcagcaggaccgcactgagcgca
acacaactcaaacaactgcttcagaacccacccgcaggtgtggaccccatcatctgggaa
caggctaaagtggacaatcctgatccagagaagttaatcccagtacctatggtgggcttt
aaagaactcctgcgaagattaaagattcaagaccagatgaccaaacagcatcagaccaga
gtggacatcatctctaatgacatcagtgagctgcaggtgaatcaggccacaaccgcagcc
aaaatcacacagtacaaacgcaagctgatggatctgtcacacagagtactacaggtgttg
atcaaacaggaggttcagaggaagagcggttatgccatccaactagatgaagagcatctg
agagttcagttagaaaccattcagtgtgagctgaacgcaccaacgcagttcaagggccgg
ttgaatgagctcatgtctcagattcgaatgcagaatcattttggagctgtacggtcagag
gaacgctatcgagtggatgccgaccttctgcgagaaatcaaacagcacctgaagcagcag
caggagggtctgagtcacctgatcagcgtcattaaagatgatctggacgacatcaagatg
attgaagatcagctgcatgatgggattcacacacgcagcagcaaactcagctga
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