Triplophysa dalaica: 130407643
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Entry
130407643 CDS
T09616
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130407643 (ddx52)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130407643 (ddx52)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
90S particles
Helicases
130407643 (ddx52)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130407643
NCBI-ProteinID:
XP_056586713
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Position
19:13236419..13241613
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AA seq
596 aa
AA seq
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MDAFDLFRKLGAGAKFNLKRFAKDAERFKGTKSEILDQLAGVSFFGTETPPKSRLGEEED
DKSDEDDVTSKRKRTKVDEPVKTSKKKRKAKEAEDADSSDGKEEKESIQWMSSQGNAKDP
KTDTKDKTSLKKLRQIHQEKVNRIRHQNRINVHGTDIPDPVSTFEELQKEYNLDPRIIQN
IKTAGFQTPTPIQMQAIPLMVHDREILACAPTGSGKTVAFCLPLLAHLRKPLNKGFRALI
ISPTRELASQTHRELVKLSEGVGFRVHIINKGVDAVKKFGPKTAKKFDILVTTPNRLIYL
LNQDPPAVDLSRVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPKIRRAFFSATFGTD
VEQWCRLNLDNLVSVNIGPRNTAAETVEQELLFVGSESGKVLAIRDLIKKGFLPPVLVFV
QSIDRARELFHELVYEGINVDVIHAERTQQQRDNVVTSFRSGKIWVLICTALLARGIDFK
GINLVINYDFPTTAIEYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSIATVIKQAGCPVP
DYMLGFKKIKSKVKRQLAMKPPRRSTIRTTPRILFQKKVSKGKRKKKAKASTEASA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtttgacttgtttagaaagcttggagcaggggcaaagtttaatcttaaaaga
tttgccaaagatgcagagcgctttaagggaaccaaatctgagatcttagatcagctggct
ggagtcagtttctttggcacagaaacacctccgaaatccaggctcggtgaagaagaggat
gacaaaagtgatgaagatgatgtcaccagtaaacgaaaaagaaccaaagtggatgagccg
gtaaagacatcaaaaaagaaaagaaaagctaaagaagcagaggatgcggacagcagtgat
ggaaaggaggagaaagagagcattcagtggatgtcatcacaaggcaatgcgaaagacccc
aagacggacactaaagataaaacttcattaaaaaaactacggcagattcatcaggaaaag
gttaatcgaatacggcaccagaaccggataaacgtgcacggtacagacatcccagatcct
gtgtctacttttgaggagctacagaaagaatataatctagacccacgaatcattcagaat
attaagacagcgggtttccaaacccccacacccattcagatgcaagccattcctctcatg
gtgcacgatagagagattttagcgtgtgctcctacaggctctggtaagaccgtggccttc
tgtttgcctttgctggcccaccttcgcaaacccctcaacaagggattcagagctctcatc
atctccccgaccagagagctcgccagtcagacgcacagagagctggtgaagttgtcagaa
ggtgtgggcttcagagttcacatcatcaataaaggagttgacgcagttaaaaaattcggg
ccaaagacagctaagaaatttgatattttggtgaccacacctaacagattgatatatttg
ctgaatcaagatccccctgctgtcgatttgagtagagtggagtggctggtggtggatgaa
tcggataaactctttgaggatggcaagacgggtttcagagagcagctcgccaccattttc
ctggcctgctcttctcctaaaatccgccgggcttttttcagcgctaccttcggcacagat
gtagagcagtggtgtagactgaacctggacaatctcgtctctgtcaatattggacccagg
aacacagcagctgagacggtggagcaagagttgctgtttgtgggttcagagagtggaaaa
gtgctggctattagagaccttataaagaagggctttctgccacctgtgctggtgtttgtt
cagtctatcgatcgagcccgtgagctcttccatgagctggtgtacgagggaataaacgtt
gatgtgatccatgcagaacgcacccaacagcagagagacaatgttgttacgagtttccgt
tcggggaagatctgggtgttgatctgcactgctcttctggctcgaggaattgacttcaaa
ggcatcaacctcgtcatcaactacgacttcccaactactgccatcgagtacatccatcgg
attgggcgcactgggagagcaggacacaaaggaaaagcaataacctttttcacagaggat
gacaaacctctcttacgcagcattgccacagtcataaaacaggccggatgtcctgtgcct
gactacatgctcggcttcaagaaaatcaaaagcaaagtgaagcgacagcttgcaatgaaa
ccacccagacggtcgactattcgcacaaccccacgcatcctctttcagaaaaaagtcagc
aaggggaaaaggaagaaaaaagctaaagcaagcacagaagcatcagcatga
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