Triplophysa dalaica: 130407671
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Entry
130407671 CDS
T09616
Symbol
myo5b
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb
KO
K10357
myosin V
Organism
tdw
Triplophysa dalaica
Pathway
tdw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130407671 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130407671 (myo5b)
04131 Membrane trafficking [BR:
tdw04131
]
130407671 (myo5b)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130407671 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130407671 (myo5b)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130407671 (myo5b)
mRNA cycle factors
P-body specific factors
130407671 (myo5b)
Membrane trafficking [BR:
tdw04131
]
Others
Actin-binding proteins
Myosins
130407671 (myo5b)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130407671 (myo5b)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130407671 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Ac76
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
130407671
NCBI-ProteinID:
XP_056586758
LinkDB
All DBs
Position
19:complement(8759166..8795513)
Genome browser
AA seq
1809 aa
AA seq
DB search
MSVTELYSKYTRVWIPDPEEVWKAAEIIRDYKEGDSILHLKLEDESTFEYKIGPKDKLPF
LRNPDILVGENDLTALSYLHEPAVLYNLKVRFLESNHIYTYCGIVLVAINPYEQLQIYGE
EVINAYTGQNMGDMDPHIFAVAEEAYKQMGRDEKNQSIIVSGESGAGKTVSAKYAMRFFA
TVGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYYIIGANMRT
YLLEKSRVVFQAEEERNYHIFYQLCASSSLQEFKDLALTSAEDFTFTSLGENIFIEGVND
AEDLVKTREALTMLGVKDVHQISIFKIIASILHLGNVVIVSERDGESCHINKDDIHLQHF
CRLLGIEQEQMEHWLCRRKLVTTSETYVKNMQHAQAVNARDALAKHIYAHLFDWIVEHIN
KSLHTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKE
QIPWTLIDYYDNQPCIDLIEAKLGILDLLDEECKVPKGTDLNWAQKLYSKHSASGHFEKP
RMSNSSFIVLHFADKVEYQSDGFLEKNRDTVYEEQINILKASQFQLVADLFQDGKDPAAA
PSSGKASRVNVRPAKPMPKGHNREHRKTVGTQFRNSLHLLMETLNATTPHYVRCIKPNDF
KEPFIFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFYSRYRVLMTKKDMTIADKKL
VCKNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRYACIKIQKTVRGWLQRIR
YRKIRKTAITLQRYGRGYMARRYAERLRLTRAALICQTRYRMVRVRREYLKTRRAVVTIQ
AFARGMFIRRLYQEFMLHHKAIIIQKAVRGWLVRKQFLRSRYAAIVIQCFYRRVRAKRQL
QQLKIEARSAEHFKNLNVGMENKIVQLQKKMDNKTQEYKTQNEQLVVVNSSLGSEVDKLQ
KELQTLRSQKGPGPQVVSLQDELERLRAELKEAHTQRKEIELEFSNEKNDLEKRVEELEK
ENSLLKKEKEEMNRSIKTAAPGKGGDASQKESRIQAELDEERQRYQNLLKEFSRLEQRYE
NLQDEMKFQPGHRRNPSNQSSLGSDSNFPSISMSEVGDTDDTIQQVEEMGIEKAAMDLSV
FMKLQKRVRELEQERKRLQTHLEKVDDLNKRRGNETRSSTSEEDINSDLAYNSLKRQELE
TENKKLKNDLNELRKAVSDKASENSSSNELQDGYSVLLNQLKEANDELEVRKEEVLMLKT
QIVNTTRQLENSIHINSNDVSEITNNKKPVDSSKAVATGESKKLLEDQLKTQSRQHNDEL
EALHTQIELMRSDLEKKQEMLDHFSTLSPEALVEFSIQQELTRLTNENLDLKEMKEKLDK
NERKLKKQLAIYMKKVKELEAIPASRSRPELHRQVTVQRKDKDFEGMLEYYKEDEALLVK
SLVTDMKPQVVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIKKVLKKNAED
FDTTSFWLANTSRLLHCLKQYSGEEAFMTQNSGKQNEHCLKNFDLAEYRQVVSDLSIQIY
QQLVRVAEAIMQPMIVSAMLESESIPSLAGMKPMGYRNRSSSFDCEDGGPAGYTLQALKR
QLGQFHATMADHGMDPEICQQVIRQLFYSINAVSLNNLLLHKDACSWSTGMQLRYNISQL
EEWLRGKNLHQGGSIAPMEPLIQAAQLLQMKKKTSQDAEAICSLCSTLSLQQIVKILNLY
TPLNEFEERVTVSFIRDIQNRLQDRKEHNQLLVDTKHTFPVLFPYTPSALSLETVHIPAS
LNLNFLTRV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgactgagctctactcaaagtacacccgggtttggatccctgacccagaagag
gtctggaaggcagctgaaatcatcagggattataaggagggagactccattcttcacctc
aaattagaagatgaatctacgtttgaatataaaattggtcccaaagacaagcttccgttt
cttcggaatcctgacattttggttggagaaaatgacctcacagctctcagctacctccat
gagccggctgtgctctacaatctcaaagtgcgtttcttggagtccaatcacatttacact
tactgtgggattgtgctggtggccatcaacccatatgagcagctacagatctatggagaa
gaagtcatcaatgcttacaccggacagaatatgggggacatggaccctcacatattcgct
gtggcagaggaggcatacaaacagatgggccgggatgagaaaaaccagtcaataatcgtg
agtggcgagtcaggtgctggaaaaacggtttccgcaaagtacgcaatgcggttcttcgca
actgtggggggttcagccagtgaaaccaacgtcgaagaaaaagtgctggcttccagccct
attatggaggccattggaaatgcaaaaaccacccgtaatgacaacagcagtcgctttggg
aagtacatccagattggttttgataggcgctactacatcatcggtgccaacatgcgaaca
tacctgctcgaaaaatccagagttgtgtttcaggctgaggaagagagaaactatcatatc
ttctaccagctctgcgcgtcatcatctctgcaagagtttaaagatcttgctttgaccagt
gcggaagattttacgttcacctctctcggggagaacattttcattgagggagtgaacgat
gctgaagatctggtgaagacaagagaggctcttacaatgctcggcgtgaaagacgttcac
caaataagcatctttaagataattgcctccatcttgcacctggggaacgtggtgattgtg
tcggagagagatggagaatcctgtcatatcaataaggacgacattcacctgcagcatttc
tgccggctgctgggtatagagcaagagcaaatggagcactggctgtgtcgtagaaaactg
gtgactacctctgagacttacgtgaagaacatgcagcacgcccaagctgtcaatgcccgg
gacgctctggccaaacacatctacgcccatctgttcgactggatcgtagagcacatcaat
aaatccttgcacacgtccaccaaacagcactctttcatcggggtgctggatatctacggg
tttgaaacgttcgagatcaacagcttcgagcagttctgtattaactatgccaatgagaaa
ctccagcaacagttcaactcgcatgtgttcaaactggagcaagaagaatacatgaaggag
cagataccatggacgcttatagattattatgacaaccagccgtgcattgacctaattgaa
gccaagctcggtatcctggaccttctagatgaggagtgtaaggtgcctaaaggaacagat
ctgaactgggcccagaagctgtacagcaaacactcggccagcgggcattttgagaagccc
agaatgtccaacagctccttcatcgtgttgcactttgcagataaggttgaataccagtct
gatgggttcctagagaagaacagagacactgtctatgaggaacagatcaacatcctcaag
gccagccagttccagctggtggctgatctctttcaggatggtaaagatcctgccgctgcc
ccatcctctggcaaggcctccagggtcaacgtccggcccgccaaacccatgccaaaaggt
cacaaccgtgagcacagaaaaaccgtaggcactcagttcaggaactcgctacatcttctg
atggaaacgttgaacgcaaccactcctcattacgtgcgctgcatcaagcccaacgatttt
aaagaaccttttatatttgattctaaaagagctgttcagcaactacgggcatgtggagtt
ctcgagacgatccgcatcagcgccgccggatatccatccagatggacatatccagatttc
tacagcagatatcgggttctcatgacaaagaaggacatgaccattgcggataaaaagctg
gtctgtaaaaacctactggagacattggtcaaggacccagataagtttcagtttggaaag
accaagattttcttcagggccggtcaggtggcctatctagagaagctccgagcagataag
ttccgctatgcctgcattaagatccagaagacggtgcgaggatggctgcaaagaattcgc
taccgcaagatccgcaagacagccatcaccctgcagagatacggccggggttacatggca
cggagatacgcagagagacttcgtctcacccgtgcagctctcatttgtcagacacggtat
cggatggttcgggtgcgacgggagtatctcaaaacccgtcgtgctgtcgtcaccatccag
gcatttgcccgtggcatgttcatacgcagactatatcaggagttcatgctccatcacaaa
gccattatcatccagaaggctgtgcgcggttggctcgtgaggaagcaatttctccgctct
cgatacgccgccatcgtcatccagtgtttctatcgccgcgtgcgtgccaagcgtcaactt
caacagctcaagatcgaggcccgatcggccgaacacttcaaaaatcttaacgtgggaatg
gagaacaagattgtgcagctgcagaagaagatggataataagacacaagaatataaaact
cagaacgagcagctggttgttgttaattcttctctgggatcagaggttgataagttgcag
aaggaactgcaaacccttcgtagtcagaagggtccgggccctcaggtggtctcgctgcag
gatgagctcgagaggttgagggcggagctcaaggaagcccacacccagaggaaggagata
gagctggagttcagcaatgagaaaaatgatctcgaaaagcgggtggaggagctggagaaa
gaaaactctcttttgaaaaaggagaaagaagagatgaaccgcagtatcaagacagctgct
ccgggtaaaggtggagatgcgtctcagaaggagagccgcatacaggctgaactggatgaa
gagaggcaacgctatcagaacctgctgaaagaattctccagactggagcaaagatatgaa
aacctgcaggatgagatgaagttccagcccggtcatcgccgtaacccctccaaccaaagc
agtctgggctcggactccaacttcccctccattagcatgtctgaagttggagacaccgat
gacactatccagcaggtggaggagatgggcatcgagaaggccgccatggacctcagtgtg
tttatgaagctgcagaagcgggtacgagagctggagcaggagagaaagaggctccagaca
cacctggagaaagtagatgatctgaacaagcgaaggggtaatgagaccaggagctccacg
tcagaggaggatataaattcagacctggcctacaacagcctaaagagacaagagcttgag
accgagaataagaagttgaagaatgacctgaacgagctgaggaaagcagtgtccgacaag
gcctccgaaaatagctcgtccaatgagctccaggacggctacagcgtgctgctgaatcaa
ctcaaagaggccaatgatgagctggaagtgcgcaaagaggaagtcctcatgctcaagacc
cagattgtcaacaccacgaggcagctggagaactccattcacattaattccaatgatgtg
tcagaaataaccaacaacaagaagccggtggactcgtccaaagctgtggccacaggggag
tcaaagaagttgctcgaagaccagctgaagacgcagtctcggcaacacaacgacgagctg
gaggctcttcacacgcagattgaactgatgaggagtgacctggagaagaagcaggaaatg
ctcgaccacttctccaccctctctcctgaagctctggtggagttcagcatacagcaggag
ctcacacgcctcaccaatgaaaacctggatctcaaggaaatgaaggagaagttggacaag
aacgagaggaagttaaagaagcagttggcgatctatatgaagaaagtgaaggagttggaa
gcgattccggctagtagaagcaggccagaactgcatcgacaggtcacagtacagaggaag
gataaggactttgaaggcatgctggagtattacaaagaagatgaggccttgctggtcaag
agtcttgttacagacatgaagccacaagttgtgtcagccaccgtcccatgcctccctgcc
tacatcctcttcatgtgcatccgccacgcagactacatcaacgacgaccagaaagttcat
tctctcctcacctccaccatcaacgccattaaaaaggttctgaagaaaaacgcagaggac
ttcgacacgacctccttctggttggcaaataccagtagacttcttcactgtctgaagcag
tatagcggagaagaggcgttcatgactcagaacagtggcaaacagaatgagcactgcctg
aaaaactttgacctggcggagtatcggcaggttgtgagcgacctttccatccagatctat
cagcaactcgtgagggtggcagaagccatcatgcaacccatgatcgtatctgccatgctt
gaaagcgaaagcatcccaagcctggccggaatgaagcccatgggatacaggaaccgctcc
tctagtttcgactgtgaggatgggggtcctgcgggatatacactacaggccctaaaacgg
cagctgggacagttccacgccaccatggccgaccacgggatggaccctgagatctgccag
caggtgattcgccagctcttctactccatcaacgcggtgagcctcaacaacttgctgcta
cataaagacgcttgctcctggagtacggggatgcagctcagatacaacatcagtcagttg
gaggaatggctgaggggaaaaaatcttcatcagggtggatctatagcccctatggaacct
ttgattcaggccgctcagctgttgcaaatgaagaagaagacatcgcaagatgctgaggct
atttgctcgctgtgtagcaccctcagtttacagcagatcgtgaagattttgaacctgtac
acaccactcaatgagtttgaggagagggtcactgtgtctttcatcagagacatacagaat
cgcctccaagatcgaaaagaacacaaccaactgctggtggacacaaagcacaccttccct
gtgctctttccctacactccgtcagcgctcagtttggagaccgtacacatccccgcctcc
cttaacctgaacttcctcacaagggtttga
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integrated database retrieval system
