Triplophysa dalaica: 130407720
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Entry
130407720 CDS
T09616
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
130407720 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
130407720
NCBI-ProteinID:
XP_056586862
LinkDB
All DBs
Position
2:12718983..12747945
Genome browser
AA seq
3128 aa
AA seq
DB search
MAGCLQRGRLSTRALLKCFFVLSLLGCCLSTTNADTFDAVFRHRHRSGPTAETILVANNG
IRVPFGRSVYLDPVNDLVTEVHAGDRCHITVLDNDPLAQRPGMLTPKKFPCAFGAEEVKY
THFGSRSPSKDHIKLQLRYDSHTDTVVVPFVLEVEVVFQQLEILTRNMPLVVEKLNGLSN
PIDKKTLEFAFEDGVTTCKVTTLVGAGKFPRYGTLTDNSVNGQMINCDDFLKKGIQYKHT
ATTNSPNRDYIPMLVEVQDNDGNAIQQEHFQIMVRIKEGTENTPPKPSFISMMMMEIDQF
VMTAITSEMLAAEDVESRSDQLIFNITSPLGYQQGYIISTDDQNQPITSFYQRDIKDLKI
AYKPPSEDSDVERIFQIEFKIIDTDGAVSDIFAFMIVVKPMNTLAPVVTKNTGQLLFEGQ
SRSLSSSQNLEISDEDNLDDVKITVVDGLKHGELTVLGSQRKFFTPADLDAGVVVYQHDG
SDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGIALFKNEVMQISPFILSA
TDIDSEDSTIKFILEEPYSLIGELLLKQAEPPQDPSAWKFSSTDEMFEQVVTEWFQQDIL
DGKLFYRHKGPHSTTTVIDQFVFRVQDDNDPPNQSGEHTFTIKIHPVDDIPPELYSGTTL
HMTVKEYELTFFMKKSLRYTDLDCDDRDLKYTIIKPPTDTDENNPIPLGAIVLTDRPDII
ISEFTQAQVNHHKVAYKPPEQELGITPKMLQFTFTVEDTASNSVDGVFTIILQPVDNKPP
VITNTGFTVQEQNTFIITRNELNASDQDTEDENIVFTVTQIPRFGQLQYLEIDMSNGETF
VLEDIENSRLAYIHSGEESLSDVIKLDISDGFHEVPIVIKISIKPVDDETPTIILPSGLF
GASIDVLENGATEITSNVIQGHDKDTDDLMLTFIVDERPRLGEIMVRGAPAERFTQHDII
NGVVVYVHTSGEIGPIKEHDSFNLTISDMSDEWVVGGNKVQGVRVHVTILPLDSIPPVVS
VGDQFVVVEGEKNVITLEHIQAEDIDTDNDDILCTIIVQPTSGYVENISPAPGSEKSRAG
TAITAFTIKDVGLSHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHLFPIVIIPANDEK
PEIFIREFVVMEGMSLVIDTPILNAADADIPGDELSFEIIENPKHGNIVQQLSTGTVPEV
KFSLKQIKEASNIVYEHDDSETKEDHFKIRLTDGKHTVEEKVIIIVIPVDDETPRMAIND
GLEVEIGETKVISNKVLKATDLDSEDKELTYVLRYGPGQGYLQRITKHGVVTGNISIEMN
FTQDELDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKGV
TLKEGGKVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLECTDLPGVPISTFSQLQLAG
NKIYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTINKLVLSEGESK
LITPFELTVEDRDTPDNLLGFIVTQVPVHGQLLFNGTQVITTFTKQDLNENLITYDHDGT
ETNEDSFSFTVTDGTHTDFYVFPNTVYETRKPQTMTIYINTMDNGVPQIVINKAAPTLRV
LHTGHLGFLITSKVLKAEDRDSPNKVLKYIVTKTPLHGFIMNAALGNDSIKSFSQADIDD
IKICYVLLDGSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEREYYIVDEDAKFLEV
TLKRRGYLGETSFVSIATKDGTAKVDKDFRGKAQKQVQFNPGQTTATWRVKIFTDQEFET
SEMFQIQLSEPVMAVLEFPDIATVEIVDPGDESTVFIPQAEYRIEEDIGELLVPVHRSGD
VSQELMVICYTQQGSATGTTPSTVLSYSDYITRPEDHTSVLRFDKDEREKPCRIIIIDDS
LYEKEESFNVSLSMPMGGQVGGKFPSAKVVILADSEDEPSFYFGETEYTVDESDGFVEVK
VWRTGTDLSKTATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTVQTFRVTILDDLGQ
PELEGPEMFEMVLRMPMNAVLGEPSKTVITINDSVTDLPKVQFREVEYKVDEADGELKAM
VYRSGDVSQRSTVRCYTRQGSAQVMMDYNERPNADASIIEFLSGEIEKPCVVTFVDDSIH
EEDEEFRLVLGTPKSKSPYGASVGEQKETLVTITDHKDKPIIRFAEIKYSIKEPQVPAEI
AIVKIPVLRQGDTSKVSVVRIHTKDGSATSGEDYNPLSQDVEFKEGETEHIVEIKVLYDG
QREIREAFTVHMKPDEYMVAETQMNKAIVYIEEMNSVADVTFPAVPQVVSLLLYDDTTRA
KDNPHPQTGYPVVCVTACNPKYFDFDKTGSICSVENINDTLTQYRWLVSAPSGPDGVTSP
LREVDTNTFFTNTKSIVLDSIYFQAGSRVQCAARAINANGDAGLELSSPIAVISREEGLC
QPRIPGTVGAEPFSAKIRYTGPDDPDYPNLIKLTVTMPHMDGMLPVISTRPLSNFELTLS
PDGTRVGNHRCSNLLDFNEIQTAHGFITDGTKNPEIIGETAPYQYSVAMRSANSLRFYRN
LNQEACLWEFSSYFDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAVG
GWQHFDLRSELRLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINDEGRLVVNFKTEA
RFRGQFVMSHSGTTLTSMIMSADHPGLTFTLTLVRTEPTYNQPMQQWSFVSDFAVRDYSG
TYTVKLIPCSASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSKK
ELWLSDGSMGFGEATDTAFVEGSNIYGRVMVDPVQNLGDSFSCGIEKVFLCTGTDGYVPK
YNPINKEYGCLADAPSLLYRLKILDKAQPETQATAFGNVPFDAFLALDTPGALSLVRQPG
SDGFTLSSSPLFQVAAGREWFIHTIYTVRSRDNANRGKRSLKYHHALSSAIAEPGIQSRN
RRAVPDPEALDIGAENNKGTNIQHIALESSNRLRVSQPWGRETNLEHPLVEGSLSKEPGS
DFSLPNGMSTLLGVAGLILLVCLVILLVVLLMRRKRKEKKYPAYSTSSCAAYGRNTSHVR
SNRDSSEV
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagagggaggctgagtacaagagcacttctgaagtgcttcttt
gtattgtctttattaggatgttgtctctctacaaccaatgcagatacttttgacgcagtt
tttcgtcataggcaccgatctggacctactgctgaaacaattttggtagccaacaacggg
attagagttccctttggacgctctgtgtatctggatcctgtcaatgaccttgttactgaa
gtgcatgcaggagaccgctgtcatattacagtcctggataatgacccacttgcacaaaga
cctggaatgctaacccccaagaagttcccctgtgcttttggagcagaagaggtcaaatac
actcacttcggttcccggagccctagcaaggatcacataaaactgcagctgaggtatgac
tcccacacagacactgtggtggttccttttgttctcgaagtagaagtggtatttcagcaa
ctggagattctcactcgtaacatgcctctggttgtggagaagctcaatggtctaagtaac
ccgattgacaaaaaaaccttagagttcgcttttgaagatggtgtcactacatgcaaggtg
accacgctagttggtgcgggcaagtttcccaggtatggcactcttactgataactcggtt
aatgggcagatgattaattgtgatgattttctcaagaagggaattcagtataagcatact
gccacaaccaattctcccaacagagattacattccaatgctagtggaagtacaagacaat
gatggtaatgctattcaacaagagcattttcagataatggttagaatcaaagagggtact
gaaaatacgccacctaagcctagctttatatctatgatgatgatggagattgaccaattt
gtgatgacagccataacttcagaaatgctggcagctgaggatgttgaatcaagatctgat
caattaatttttaacataacatctcctctcgggtatcaacagggctatattatcagcaca
gatgatcaaaaccagccaatcacctctttttatcagagagacataaaggacctgaaaata
gcctataaacctccctctgaggattcagatgtggaaagaattttccagattgaatttaaa
attattgacactgatggagctgtgtctgatatttttgcttttatgattgttgtaaaacca
atgaacactttagccccagtggtgaccaaaaatacaggacagctgctttttgagggacaa
tcaagatctctatccagctcacaaaatttagagattagtgatgaggacaatcttgatgat
gtgaagataactgtggttgatggcttaaaacatggagagctgactgtgttagggtctcaa
agaaagtttttcacacctgctgatctggatgctggagttgttgtataccagcacgatgga
agtgatacctacagtgacaacattatattcagaatgacagatggcagtaatgaagtagag
tttttgtttcccatcaccatcgcccccaccgatgacgaacctcccattataaacgccaat
acaggtattgctctttttaaaaatgaagtaatgcagatctcccccttcatcctgagtgca
actgacattgactctgaagactcaaccattaaatttatattagaagagccttattcactg
attggagagctgctcctcaagcaggcggagcctccgcaagacccatctgcgtggaaattc
agctcaacagatgagatgtttgaacaggtggtgacggaatggttccagcaagatattctg
gatggaaagctgttttatcgtcacaaaggtcctcacagtacaaccactgtgattgaccag
tttgtcttcagagtccaggatgacaacgacccaccaaatcagtcaggagaacacacattt
accattaaaatccatccagtggatgacatacctccagaactttactctggcaccacacta
cacatgacagtcaaagaatacgagctgacattttttatgaagaaatctctacgttacaca
gatctggactgtgatgacagggaccttaagtacacaatcatcaaacctccaactgacaca
gatgaaaacaaccccattcctcttggtgccattgtgttgactgacaggcctgacattata
ataagtgagtttacacaagctcaggtcaaccaccataaagtggcatacaaacccccggag
caagagcttggtattactccaaaaatgctccagtttacgttcactgtggaggacacggct
agcaattctgttgatggagtttttaccataattttacagccagtggacaacaaaccacct
gtaattacaaacactggtttcactgttcaggagcaaaatacgtttataataaccagaaat
gaactaaatgcctctgaccaggacacagaggatgaaaatattgtattcacagtgacccag
attccgagatttggacagctgcagtatttggaaattgacatgtctaatggagagactttt
gtgttggaggacattgaaaacagtcgactggcctatattcacagtggtgaagaatctctc
agtgatgtcattaaacttgacattagcgatggcttccatgaggtgcctattgtcataaaa
atcagcatcaagcctgtcgatgatgaaaccccaaccattatattaccttctggtttgttt
ggagcttccattgatgtacttgagaacggtgcaacagaaatcaccagcaatgtcattcag
ggtcatgataaagacacagatgacctcatgctcactttcatagtagatgagcgtcccaga
ttgggtgaaataatggtaaggggagctcctgctgagcgcttcacccagcatgatataata
aatggtgtggttgtctacgttcacacaagtggtgagattggccctatcaaagagcatgat
tccttcaacctcaccatatctgacatgtctgacgaatgggttgttggtggcaacaaagtc
caaggcgttcgtgtccatgtcaccatcctacctttagacagcatccctcctgtagttagt
gtgggtgaccagtttgtagtagtagagggtgaaaagaatgttatcacattggagcacatt
caagctgaggatattgacactgataatgatgatatcttgtgcactattattgttcagccc
acatctggttatgtggagaacatttcaccagctccagggtctgaaaaatccagagcaggc
actgccatcactgcttttacaattaaagatgttggtcttagccacatctattatgttcaa
agcattcacaagggtgtggagccagtggaggacaggttcactttccgctgctctgatggt
attaacttttcagaaaggcacctttttcccattgtcatcatcccagccaacgatgaaaag
ccagagatattcatccgtgagtttgtcgtgatggagggaatgagtttggtgattgacact
cctattttaaatgctgctgatgctgacattccaggtgatgaattatcttttgagatcatt
gaaaatcccaaacatggaaacatagtccagcagttaagtactggcacagttccagaagtg
aaattttccttaaagcagatcaaggaggcatctaatatagtttatgagcatgatgactct
gaaaccaaggaagaccatttcaaaattagactaactgatggaaagcatactgttgaggag
aaggtcatcataattgttattcctgttgatgatgaaaccccaagaatggcgatcaatgat
ggtcttgaagtagaaataggagaaaccaaagtaattagcaacaaagtcctgaaggccact
gatttggattcagaggacaaagagcttacttacgtcctccgttatggccccggtcaaggc
tatctccagcgaatcaccaaacatggagttgtcactggcaatattagcattgaaatgaat
ttcactcaagatgaacttgacaaacagctgattcagtacgttcacacaggccaggaaggt
atccgtgacctactaaagtttgatgtaacagatggaattaacccgctaattgatcgctac
ttctacattaatattggcagcatcgatatggtattccctgatgttattaacaagggtgtt
accctcaaagagggaggtaaggtcaccctaaccacagaccttctcagcacaactgatatc
aacagtccagatgaatatctaagtttcagcatcacacgagcacccagcaggggtcatctg
gaatgtactgatctcccaggtgtgcccatctccaccttctctcagctacagcttgctggc
aacaaaatttactacatccacacatctgacgatgaagtgaagatggacagctttgaattt
gaggtgaccgatggctacaaccctgtgttccgcaccttccgtgtatccatcactgatgtc
gacaacaagaagccagtcgtaacgataaataaactagtactgagcgaaggagaaagcaag
ctgatcacaccctttgaactgacagtggaggatcgggatacaccagacaacctgttagga
tttatagtgactcaggtgccagttcatggtcaacttttgtttaacggaactcaagtcatt
acaacattcaccaagcaggacctaaatgagaatctcattacttatgatcatgatggcaca
gagacaaatgaagacagcttctcctttacagtaactgatggaactcatactgatttttat
gttttccccaatactgtttatgaaactcgtaagcctcagacgatgaccatttatattaac
acaatggacaatggagtgcctcaaattgttattaacaaagcagcacccactctcagagtt
cttcatactgggcaccttggctttttgattaccagtaaggttctaaaggctgaagacaga
gacagtccaaacaaagtgctcaagtacattgtgaccaaaacccctctccatggctttatt
atgaatgcagcgttgggcaatgacagcatcaaatccttctcacaggctgatattgatgat
ataaagatttgttacgtgcttctggatgggtccaacgccacaagtgacatattctacttt
acagtggaagacaatggtggtaacaagttgaagccacaaccgtttcgcctaaactgggcc
tggatatctctggagagggaatactacatagtggatgaggatgctaaatttctggaggtc
accctcaaacgaaggggatacttgggagagacatcatttgtcagcattgccaccaaggac
ggcactgcaaaagtggacaaagacttccgaggcaaagctcagaaacaggttcagttcaac
cctggccaaaccactgcaacctggagggtcaagatattcactgatcaagagtttgaaact
tcagagatgttccaaatccagctctctgaaccagtaatggctgttctcgagtttcctgat
atagccactgtggagattgtggatcctggtgatgagtctacagtgttcatccctcaggca
gaatatcgtattgaagaggatataggagaactgctagtcccggtccacagatcaggagat
gtcagccaggaactcatggtgatatgttacactcaacaaggcagcgcaactggcaccacc
cccagcactgtgctctcctattctgactacatcacaagacccgaggaccacaccagtgtt
ctgcgttttgacaaggatgaaagggaaaagccatgtcgcattataataattgatgactcc
ctctatgagaaagaggagagcttcaacgtgtcactcagtatgcctatgggtggccaagtg
ggaggcaagttccccagtgccaaagttgtcatcttggctgatagtgaagatgagccatcg
ttctactttggagagacggagtacacagtggatgagagtgatggttttgtggaggtaaaa
gtgtggaggactggcactgacctttcaaagacagccaccgttacagtccggtccaggaag
agtgaccctgtttcagcagaagcgggtctagattatgtgggaatcagtcgtaatttggat
tttgctccaggagtgaccgtacagactttccgtgtcacaatcctggatgacttgggtcag
ccagagctggaaggaccagagatgtttgagatggtgctgcgtatgccaatgaacgcagtt
cttggagagcctagcaagactgtcattaccataaatgacagtgtcacagacttgcccaag
gtgcagttcagagaggtggagtacaaggtggatgaggctgatggagaattaaaggcaatg
gtgtaccgtagtggtgatgtcagtcagaggtccacagttcgctgttatactcgccaggga
tctgcccaagtcatgatggactacaatgagcgacctaatgctgatgcctctatcatagag
ttcctatcaggtgaaattgagaagccgtgtgttgttacttttgtggatgactccattcat
gaggaggatgaggagttccgcttagttttgggtacaccaaagagcaaatcaccatatggt
gcttcagtaggtgaacaaaaagagactctggtcaccatcaccgatcataaggacaaaccc
atcatcaggttcgctgagatcaaatacagcattaaagagccacaggttcctgccgagatt
gctatagtgaagatccctgtcctgcgtcagggtgatacatccaaggtttctgtggtgaga
attcacaccaaggacggctctgcaacatcaggagaggactacaatcctctttctcaagac
gtggagtttaaggagggtgagacagagcatattgtggagattaaggtgctttatgatgga
caaagagagatccgtgaggctttcaccgttcacatgaagcctgacgagtatatggtggct
gagacccagatgaacaaggctattgtgtacattgaagagatgaatagtgtggctgatgtc
accttcccagctgtgcctcaggttgtgtcattgctgttgtacgatgatacgactcgggct
aaggacaacccccaccctcagactggatatcctgttgtgtgtgtgactgcctgcaacccc
aaatactttgactttgataagactggctccatttgctcagtagaaaacatcaatgacaca
ctgactcagtaccggtggttagttagtgccccgagtggaccagatggagttaccagcccc
ttgagggaagtggacaccaacaccttcttcactaacaccaagtctatcgtgctggactca
atctatttccaggctggctcccgagtgcaatgtgctgcccgagccataaatgccaatggt
gacgccgggctagagctcagctcacccattgcggtcatcagccgagaggagggtctctgt
caacctcgtatacctggcacagtgggcgctgaaccattctcagctaaaattcggtacact
ggccccgatgaccctgactatcctaatctgatcaaactcactgtcactatgccccacatg
gatggcatgctgccagttatctccacgcgtccgctgtccaactttgagctgactcttagt
ccagatgggacacgagtcgggaaccaccgctgctctaaccttttagattttaatgagatc
cagacagcacatggcttcattactgatggcaccaagaacccagaaattattggcgaaaca
gcaccgtaccagtatagtgtggccatgcgtagcgccaattcccttcgcttctaccgtaac
ctcaaccaggaggcatgtctgtgggagttcagcagctactttgacatgtcagagctgttg
aatgattgtgggggatccattggcacagatggacaggtgctgaatcttgttcagtcctat
gtaacattacgggtgcccctgtttgtgtcctatgtcttccactctcctgttgcggttggg
ggctggcaacattttgacctgcgatctgagctaaggctcacctttgtgtatgacactgcc
attttatggcaagatggtattggaagcccaccagaggctgagctacaaggtgccatgtat
cctaccagcatgagaatcaatgatgaaggtcgtcttgtagtcaacttcaagactgaggct
cgattcagggggcagtttgtcatgtctcattcaggaaccactttgacctccatgataatg
tcagctgatcaccctggactcacattcaccctcactctggtccggactgaaccaacttac
aaccagcccatgcaacagtggagctttgtttctgacttcgccgtaagggactattctggt
acctatactgtgaagctgattccttgcagtgcttcacctaatggtgagttcagcattcct
cccgtctgtcatccgcgggagcctctcacctttgacatggacattcgcttccagcaggtg
agtgatcctgtagcagcagagttcagcttgaatacacagatgtttctgctgtcaaagaag
gagctgtggctgtctgatggttccatgggctttggcgaggcaactgacactgcctttgtt
gaaggttctaacatctatggtcgtgtgatggtggacccagtgcagaatttgggtgactct
ttctcctgcggcatagagaaggttttcctctgtacaggcaccgatggctacgtccccaag
tacaaccccatcaataaagagtacggatgtctagctgatgctccatcactgctttacaga
ctgaagatcctggacaaagcccagccagaaacccaggccactgcctttggaaatgtaccg
tttgatgctttcctggctttggatacccctggagctctttccttagtccgacaacctgga
tctgatggcttcaccttgtcatcatctcctcttttccaggtcgctgctggccgtgaatgg
ttcatccacaccatctacacggtccgttctagagataatgccaaccgtggtaaaagaagc
cttaagtaccaccatgcattatcatccgccatagctgaacctggcatacaaagccgcaac
cgtcgtgccgtacctgacccagaggctttggacatcggtgctgagaataacaaaggcacc
aacatccagcacattgctttggaaagctccaaccgactgcgggtgagccagccatggggc
cgcgagactaacttggagcatcctctggtggaggggagcctgagtaaggagcccggttcc
gatttctctcttcccaacggtatgtccacattgctgggggtggctgggctcatcctgctg
gtttgtctggtaatattgctggtggttctattgatgcgccgcaagaggaaagagaaaaag
tatccagcgtattccacttcctcctgcgcagcctacggcagaaacacctcacacgtgagg
agcaaccgagatagctctgaggtgtaa
DBGET
integrated database retrieval system
