Triplophysa dalaica: 130407739
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Entry
130407739 CDS
T09616
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130407739 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130407739 (nup98)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130407739 (nup98)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130407739 (nup98)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130407739 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
TFIIA
Motif
Other DBs
NCBI-GeneID:
130407739
NCBI-ProteinID:
XP_056586899
LinkDB
All DBs
Position
19:12837311..12851043
Genome browser
AA seq
1824 aa
AA seq
DB search
MFGKSFGAPAPFGGGTGGFGTSSTFGQQNAGFGTTGGFGSSAFGTTNNTGGLFGTTQNKP
GGLFGSSTFSQPVTSSTSAGFGFGAPSGTSNSLFGSTNTGGGGLFAQQNNAFSANKPTTF
GTFGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSTNFTPAPPGTTIKFNPPTGSDTMVKGG
VTTSINTKHQCITAMKEYETKSLEELRFEDYQAGRKGPSNPMAAGTAGLFGATAAATSST
GTGLFGSSAPNTGFSFGQNKTSFGTSTGAFGTTAGGLFGQQPAQQQQQQQQQQQQQQQQQ
QQQQQQQASSLFKPFGSATTTQNTGFSFGNTNTMGQPSTMGLFGNTAASQAGGLFGNTNT
STAAGFGQSTGLFGQPNTGFGNNLFGNKPGGFGTTTTSAPSFGTATGLFGNKPTLPLGTN
ANSSTFGFGGTGAGGSLFGNKPATTALGTGLGTGFGTGTGQTSLFGNNQNKLGSTLGSVG
TFGTGFNTGASTLNFGAPQQPVALTDHGATAAQQAVLQQQINALAYSPFGDSPLFRNSLS
DPKKKEERLKPTNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEP
SHTNGAFMPRKSIKKLVLKNLNNSSLYNNSMNREADDLASPSEYPQNGLSLSLDERDTRE
ATMERSGEDDLEVSKFYTNPISKPIPHAQLSPLLQDTITEFNMRGPSSHRNGLEASSEEI
SLAEDSIQEERDDELDAQKPPHPAGIVLGRVGYYTIPSMEELGKMLNENGECIVENLTVG
RKGYGSVFFTGEVNLTNMNLDEIVHFRRKEIIVYPDDKEKPPIGEGLNRRAEVTLDGVWP
NDKTTCCQIKSPERLTATNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEEEEVASSKVDLKKLKTGIPPGIQQLHLNQQPVPPQAQSTAVFELLSRVSELDSDMADI
TQEPATDSVLGDEDGERISLESKLRAETPAEHEPVSASSQMASAMGINPHTLQIMKASLF
AEDDECDLFQEHGSSKLIQDVASAKLLLSRGGRPSIGGLLQTKFTSGGGLFSHLPEAPFG
GISQKLGKSFASDTPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLESSVTLGKGRLL
MDAALFRGRSFRVGWGPNWTLVHSGDQLSVTEAMKEQATESMGFGFLPKPTKTKPITECP
FKVRVEKVVGLKPKESAESLALYHKQLEIGLKHSTITTEDPCPFVQPASGVDALHEYAEW
IVLVNKDMGAGDAVLAHWRQVWTLCAALWGCHGDQDMETEEYSEYQQQLERRRSFSNWLS
ESAAERIEEEVGRALQLNHAEAIFSYLTGHSIGKACKLAQKNGDHRLSLMLSQAVGSQYC
RDLLALQLSDWNRMQTDSFIDEGRLKIFALLAGKPVWQSTDFCINVCSELDWKRCVAVHL
WYMLPPTASVADALAKYESAFQGSEEGKKYACLPLPPYVDELELLDLDEEMEEKEPKSSL
YDICFHLLKLYSDRHYNLQQLLDPCTVTADRLDYRLSWHLWNVLQALNYNHLSTSCQGLM
HASYAAQLESAGLWEKAVFVLLHIPDSGCREMAVREMLNLHCPLEESEESMKKEQFLIEK
LLIPIQWIHQAKAIRACREGDKHREALHLYKAGHWNHCHRLVIQHLAPDCIINDNHKDLL
DFLEGLAVPDRSVQIQSWDTSGRVYLDYMHVIQSLHDIQQTESPGYELERLHTEVTSLCG
RIELLPCAKAKDRLAQSEMAKRVANILRVVLSLQQGGEGAPDLRHIPLCQLAPHIGRLPM
PEDYALEELRNLTQSYLQQYVVGH
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaaatcttttggtgctcctgctccctttgggggcgggacaggaggatttggg
acttcatcaacatttgggcaacaaaatgctgggtttggaacaacaggtggctttggttcg
tcagcgtttgggacgacaaacaacacaggaggactttttgggaccacgcagaacaagcct
ggtggtctctttggctcaagcacttttagtcaacctgtcacatcttccaccagtgctgga
tttgggttcggtgcacccagcggtacatcaaacagcctttttggaagcaccaacaccgga
ggtggaggcttgtttgcccagcagaataatgcgttcagtgccaacaaaccaaccacattt
ggcactttcggaaccagtaccagtagtggaggattatttgggacaaccaacaccacgtcc
aacccttttggaggaacatcaggctccttgtttgggtcaactaatttcacccctgcccca
cctggcaccacaatcaaattcaatccaccaactgggagtgacacaatggtgaagggtggt
gtgacgaccagcatcaataccaaacaccagtgcatcaccgccatgaaggaatacgagact
aaatccttggaggaactgaggtttgaggattaccaggcgggaagaaaggggccctccaac
cccatggcagctggcacagctggtctgtttggagccacagccgccgctacttccagcact
ggtactggtctctttggttcctctgctccaaacactggcttcagctttggccagaacaaa
acctcatttggcaccagtacaggggcatttggcacaactgccggaggtttgtttggccag
cagccagcgcaacaacaacaacaacaacaacaacagcagcagcagcagcaacaacaacaa
caacaacagcagcagcagcaagcttccagtctcttcaaaccattcggctctgccaccact
acacaaaacactggtttctcctttggcaacaccaataccatgggtcagcccagcaccatg
ggtctgtttggcaataccgctgcctcacaggctggagggcttttcggaaacactaacaca
agtaccgctgcaggctttggacaaagcacggggctcttcggtcaacctaacactggattt
gggaataatctctttggtaataagccaggtggatttggtaccaccaccaccagtgcaccc
tcctttggcacagccactggtctgtttggaaataagccgacgctccctctagggactaac
gcgaactcgtcaacctttggatttggtggaactggtgctggcgggagtctttttggtaat
aaaccagcaacaacagccctgggaacaggattgggaactggctttggaacaggaaccggg
cagacgtcattgtttggaaacaaccagaacaagctaggctcaaccctgggctcagtgggt
acattcgggactggttttaacactggagccagcactctgaattttggtgcaccccaacaa
cctgttgctctgactgatcatggcgcaacagctgcgcagcaagctgtacttcagcagcag
atcaatgcgttggcatactcaccttttggagactcgcccctcttcagaaactcgctgtct
gaccccaaaaagaaggaagagcgcctgaagcccacaaatccagctgcccagaaagccctg
acaacccccacccagtacaaactgacccctcgtcccgccacccgagtgcgtcctaaagct
ctgtcctcctcgggctcatctaaatcacagctttttgatggacttgatgatgatgaacct
tcacacaccaatggagccttcatgcctcggaagagcataaagaagcttgtgttgaagaac
ttgaataacagcagtctgtataacaactcaatgaacagagaagctgatgacctggcctcc
ccttcagagtacccacagaatggactcagtctgagcctggatgaaagggatacaagagaa
gcgacaatggagagaagtggggaagatgatctggaggtctccaagttttacaccaaccca
atctccaaacccattccgcacgcccagttgagccccttactgcaagacactatcactgaa
ttcaacatgcgcggaccttctagtcatcgcaacggcctggaggccagcagtgaagagatc
tccctggcagaggattctattcaggaggaaagagatgatgagctggacgctcagaaacct
cctcatcctgctggtattgttcttggccgtgtgggctactataccatcccatctatggag
gagctgggaaaaatgttgaatgagaacggagaatgtattgtggagaacttaactgttggc
agaaaagggtatgggtcagttttcttcaccggtgaggtgaacctgaccaacatgaacctg
gatgagattgtgcacttcaggcgcaaggagataattgtgtaccctgatgacaaagagaaa
cctcctattggagagggtctcaacagacgggcggaggtgactctagatggtgtctggccc
aatgacaagaccacgtgctgtcagatcaagagcccagagagactcactgcaacaaactat
gagggccggctggaagctgcctcacgcaaacaaggcgctcgcttcctggagtaccgtcct
gaaactggctcgtgggtgtttgaggtggcccacttttcaaagtatggcctacaggattca
gacgaagaggaggaagtggcttcatccaaggttgacctgaagaaactgaagacaggcatt
cctcccggcatccagcagcttcatctgaaccagcagccggtgccaccacaggctcagagt
actgcggtttttgagctcctaagccgtgtgtcggagttggacagcgacatggccgacata
acccaagaacctgccacagacagtgttttgggggacgaggatggagagagaatctcactg
gagagcaagctcagagccgagactcctgccgagcacgagcccgtttcggcttcgagccaa
atggcgtcggcgatgggcatcaaccctcataccttgcagattatgaaggcctctctgttt
gctgaggatgacgagtgtgatttgtttcaagaacacggttcttcaaagctcatacaagac
gtggcctctgctaaacttttgctttctcgaggtggtcgaccatcaattggaggcctgtta
caaaccaagttcacctcaggaggaggacttttttctcatttgccagaagcaccttttggt
ggaatatctcagaagcttggcaagtcgtttgcttcagataccccgtggccttcattgggc
ccctcctttcttttgcctgcacctcctcctgaacctaccctacgtaccgtgggagcccgc
agattgggaggacctgtacctctagagagctccgtaacacttggaaaaggacgtctgctg
atggatgctgctttgttcagaggacggtcttttagagtgggctggggacccaattggacc
ctggtgcactctggagatcaacttagtgtgacggaagcaatgaaggaacaggcaacagaa
agcatggggttcggattcttgcccaaaccaaccaaaaccaaaccgatcactgaatgtcct
tttaaagtgcgtgtggagaaggtggtgggtcttaagcccaaggagtcggcagagagtttg
gctctgtaccacaagcagttggagattggattgaagcacagcactatcacaaccgaggac
ccttgtcctttcgtccaacccgcgagcggagtggatgctctgcacgagtatgcggagtgg
attgtgttggtcaacaaagacatgggagcaggcgatgctgtgttggctcactggcggcaa
gtttggactttgtgtgctgctctttggggttgtcacggtgatcaggatatggagactgag
gagtattctgagtaccagcagcagcttgagcggcggaggagcttctcaaactggctctca
gagagcgcagctgagcgtatcgaggaggaagtgggtcgagctctccaactcaaccacgct
gaggccatattcagttaccttactggccactccattggcaaggcctgcaaactggctcag
aagaacggggaccatcgcctttctctgatgctgtctcaggctgtgggctctcagtattgt
agagatcttttggctctgcagctcagtgactggaacagaatgcagactgactccttcata
gatgaggggaggctgaaaatatttgctctgctcgcaggcaaaccagtgtggcagtcaaca
gacttctgtataaacgtgtgctctgagctcgactggaagcgctgtgttgctgttcatctt
tggtacatgctgcctcccaccgcttctgtcgctgatgctcttgctaaatacgaatccgcc
tttcagggttcagaggaagggaagaagtatgcttgccttcctttacctccctatgtggat
gaattggagttactagatttggatgaagagatggaggagaaagaacctaaaagttccctc
tatgacatctgcttccacctgcttaagctttacagtgaccggcactataacctacaacag
ctacttgatccctgcacggtaactgctgatcgtctggactatcggctgagctggcacctg
tggaacgttttgcaggctctcaactacaaccatctgtccacctcatgccagggcttgatg
cacgccagttacgctgcccaactagagagtgcaggactctgggaaaaggctgtgtttgtg
ttgctgcacatacctgactcgggatgtagagaaatggcagtacgggagatgctgaacctt
cattgccccctggaagagtcggaagagtcgatgaagaaggagcagtttctcatcgaaaag
ttgctcatccccatacagtggatccatcaggccaaggccatccgtgcctgcagagaggga
gacaaacaccgggaagccctgcatctctataaggccggccactggaatcactgccatcgg
ctggtcattcaacacctggcgccagattgcatcattaatgataatcataaggaccttctg
gatttcctggaaggattagcggtaccagaccgcagtgttcagattcagagctgggacaca
tctggacgggtttacctcgattacatgcatgtcatccagtcactgcatgacattcaacag
accgaaagcccaggatatgagctggagcgattacatacagaggtgacgtctctatgtggc
aggatagagctcctcccttgcgccaaggctaaagaccgtctcgcccaatcagagatggcc
aaacgtgttgctaacatcctgcgggtggtcttgagtctccagcaaggcggtgagggcgcc
ccagatctccgacacatccctctctgtcagctggcaccgcacattggacgtctgcctatg
ccggaggactatgctttagaagaactccgcaaccttactcaatcttacctgcagcagtat
gtagtcggtcactaa
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