Triplophysa dalaica: 130407783
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Entry
130407783 CDS
T09616
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
tdw
Triplophysa dalaica
Pathway
tdw04145
Phagosome
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130407783 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130407783 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130407783 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130407783 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130407783 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130407783 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130407783 (thbs4b)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Opsonins
130407783 (thbs4b)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130407783 (thbs4b)
Exosomal proteins of colorectal cancer cells
130407783 (thbs4b)
Exosomal proteins of bladder cancer cells
130407783 (thbs4b)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130407783 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
130407783
NCBI-ProteinID:
XP_056586987
LinkDB
All DBs
Position
19:2001902..2010318
Genome browser
AA seq
950 aa
AA seq
DB search
MPCIMHLLAAVSLILSLSSANAESTVYNLLTSPDCLPDLLHGGLAEQGVTELFILATFRL
QPRTGSTVFTLYNPQDNSKYFEFTVMGKLNKASLRYLRRDGRMGTVTFNNLKLADGEKHR
LLFHLKGLEVGGPKAFPQGQGVIPVPGVELHVDCRLVETLRDLPAVFNGLNNHQGVELKT
MQGKAQEELEELKLAFGDTMENVASLQDCHTHQSDSVQTLGLNTKQLTTQMLELTKVINE
LKDVLIQQVKETSFLRNTISECQACGLGGSEVVKPKCTPGVCFRDDMCIETEDGLECGPC
PDGYTGDGYSCDDVNECQFNPCFPGVRCVNMAPGFRCEACPLGFTGKPVEGVGVAFAQTH
KQVCDDIDECKGPDNGGCTADSICVNSVGSYQCGRCKTGFTGDQIRGCKPEKSCGNRLHN
PCDPNAQCTEERDGTITCQCGIGWAGNGFLCGKDTDIDGYPDEKLRCRDPNCRKDNCVTV
PNSGQEDADSDGKGDACDPDADGDGILNEQDNCWLTPNINQLNSDKDSHGDACDNCVRVD
NPDQRDTDSDGLGDACDDDMDGDGIRNILDNCQRVKNRDQLDRDGDGVGDACDSCPDIPN
PNQSDIDHDLVGDSCDTNQDSDGDGHQDSKDNCPLVINSSQLDTDKDGLGDECDDDDDND
GIPDSIPPGPDNCRLVPNPDQMDDNNDGVGDICESDFDQDKVIDRIDNCPENAEITLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKSGPGEHLR
NSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGSDLVADSGV
TIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTHHGVDPL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcataatgcatctcctcgcggccgtttctctgattttgagtttaagttcggca
aacgcagaatcaaccgtgtataacctgctaacttcaccggactgtctgccagatctactg
cacggaggtttggcagagcagggagtaacagaactctttattcttgcaacgtttcgtctc
cagcctcgaaccggaagcaccgtatttactctgtataacccgcaagacaacagcaagtac
tttgagtttacagtaatgggaaaactcaataaagctagcttacgatacctccgccgagat
ggcaggatgggtactgtcacctttaacaatctcaaactggctgacggggaaaagcatcgc
ttgcttttccatctgaagggactggaagtaggcggtccgaaggcgtttccgcagggccag
ggggtgatacctgtgcccggtgtggagctacatgtagactgcaggctggtggagaccctg
agagatttacccgctgtgttcaacggtctaaacaatcaccagggagttgaactcaaaacg
atgcaggggaaagcgcaagaggagttggaggagctcaaactggcattcggtgatacgatg
gaaaatgttgcatcacttcaggactgccacactcatcagagtgactccgtacagacttta
gggctaaacactaaacagctcactacacagatgctggagctgacgaaggtcattaatgag
ctaaaagatgttctcattcagcaggtaaaggaaacctctttcctcagaaacaccatctct
gagtgccaggcctgtggactgggcggatcggaggtggtaaagccaaagtgtactcctgga
gtgtgtttccgtgacgatatgtgcatagaaacagaggatgggctggagtgtggaccgtgc
cctgatggatacacaggggatggatacagctgtgatgatgttaatgagtgccagtttaac
ccgtgtttcccgggcgtgaggtgtgtaaacatggctccagggtttcgctgtgaagcctgc
ccacttggattcactggcaaacccgtggagggtgtgggcgtggcctttgcacaaacgcac
aagcaggtgtgtgatgatatcgacgagtgtaaaggtccagataatggaggctgcactgcc
gattccatctgtgtgaactctgtgggatcatatcaatgtggcagatgtaagaccggcttc
acaggtgaccagatccgaggttgtaagccagagaaaagctgtggaaaccggctgcacaac
ccctgcgaccccaacgctcagtgcacagaggagagagatggaaccatcacttgtcagtgt
ggcattgggtgggctggaaatggttttctctgcggaaaagacacagacatcgatggctac
cccgacgagaagcttcgctgcagagaccccaattgcagaaaggataactgtgtcaccgtt
ccaaactcgggacaagaggacgcagacagcgatgggaaaggtgacgcatgtgacccagat
gcagatggcgatggaattctcaacgagcaggacaactgctggttgaccccgaatataaat
cagctgaacagtgataaagacagtcacggcgacgcatgcgacaactgtgtccgagtggat
aacccagatcaaagagacacagattcagatggcctcggagacgcatgtgacgatgacatg
gatggagatgggataagaaacattctggataactgccagcgggtgaaaaatcgtgatcaa
ctggatcgtgatggggatggggtgggagatgcatgtgacagctgtcctgatatcccaaat
ccaaaccagtctgatattgaccatgatctcgttggagactcctgtgacacaaatcaagac
agtgatggtgatggtcatcaagacagcaaggacaactgcccactggttataaacagctcc
cagttagacacagataaagacggactgggagatgagtgtgatgacgatgatgataatgac
ggtattcctgactcaattcctcccggacctgataactgtcggctggtgcccaatcctgac
cagatggatgacaacaatgatggggtgggtgacatatgcgagtcagacttcgaccaggac
aaagtgattgacagaattgataactgcccggaaaacgcagagatcaccctgacagacttc
agagcctatcagaccgtcgtactggacccagaaggtgatgcccagattgaccccaactgg
gtggttctgaatcagggaatggagattgtccagaccatgaacagtgaccccggcctggct
gtcggctacactgcgttcagcggcgttgacttcgagggtacgttccatgtgaatacggtg
actgatgacgactacgccggctttatcttcggataccaggattcctctagtttttatgtc
gtgatgtggaaacaaactgagcagacgtattggcaggccacgcccttcagagccgtggcc
gaacctggcattcagctaaaggcagtgaaatctaaatctggaccaggtgagcatttgaga
aactctctttggcacaccggtgacactaatgatcaggtgcgtctgctgtggaaggatcca
cggaatgtcggctggaaagataaagtgtcataccgctggtatctgcagcaccgcccccag
gtcggatacatcagggtgcgtttctatgagggctccgacctggtggcagactctggggtg
acaattgataccacaatgagaggtggaagactgggtgtcttctgcttctctcaggaaaac
atcatctggtccaacctaaagtatcgctgcaatgacaccattccagaggatttccaggag
ttcagcacacatcacggcgtggacccgctgtaa
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