Triplophysa dalaica: 130407910
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Entry
130407910 CDS
T09616
Symbol
zgc:171740
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130407910 (zgc:171740)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130407910 (zgc:171740)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130407910 (zgc:171740)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
zf-C3HC4_3
ARMET_C
RR_TM4-6
Mpp10
zf-C3HC4_2
Prok-RING_4
zf-RING_5
MUG2_C
BUD22
zf-C3HC4_4
FRQ
Ish1
FGF-BP1
DUF740
Motif
Other DBs
NCBI-GeneID:
130407910
NCBI-ProteinID:
XP_056587215
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Position
19:9927722..9931142
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AA seq
288 aa
AA seq
DB search
MDLGPLMCHACQRLHCTFFERAELMRLKVKDLRDYLHLHEIPTQMCREKEELVELVLAQQ
IPRGGAESRSQPGVVALPPHPLQEEEDGEEEEEEEEEEEEEEEEEEETGEEEEEEEEEEE
EEGEEEEEGEEEEEEEEGEDEEESTDSEETLVHSRRASLSDLSSVEDIEGLSVRQLKEIL
ARNFVNYQGCCEKWELMEKVTHLFNDQKDLHNLVSKTNKKEAEEAEEADPAEPSGQEDNL
CKICMDFPIDCVLLECGHMVTCSKCGNRMNECPICRQYVVRAVHVFRS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatctggggccgctgatgtgtcacgcctgtcagcggctccattgcacgttttttgag
cgtgcggaattgatgcgactgaaggtaaaggacctccgggactacctccacctgcacgag
atccctacgcagatgtgtcgagaaaaggaggagctggtggagctggtgctggctcaacag
attcccaggggcggtgccgagtctcgttcacagccgggtgtagtcgctttgccacctcat
cctcttcaagaggaggaggatggggaagaagaagaggaggaggaggaggaggaggaggag
gaggaagaagaagaagaagaaacgggagaggaggaggaggaggaggaagaagaggaagaa
gaagagggagaggaagaagaagagggagaggaagaagaggaggaggaagagggggaggat
gaggaagagtccacagacagtgaggaaacactggtgcacagcagaagagcctccctgtca
gacctgagcagcgtggaggacattgaaggcctcagcgtgcggcagctaaaggagatcctg
gctcgcaactttgtgaactaccagggctgctgtgagaaatgggaactgatggagaaggtc
actcacctctttaatgatcagaaagaccttcacaacctggtttcaaaaacaaacaaaaaa
gaagctgaggaagctgaggaagctgacccagctgagcccagcggccaggaggacaatctg
tgtaagatctgcatggactttcccattgactgcgtactgcttgagtgtggacacatggtc
acatgcagcaagtgtgggaaccgcatgaatgagtgtcccatctgccgacagtacgtggtt
cgagccgtgcatgtctttagatcatga
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