Triplophysa dalaica: 130407918
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Entry
130407918 CDS
T09616
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130407918
Membrane trafficking [BR:
tdw04131
]
Protein recycling
Others
Others
130407918
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130407918
NCBI-ProteinID:
XP_056587229
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Position
2:complement(5922476..6060554)
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AA seq
1260 aa
AA seq
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MEKGNRNHRFNVSAFCALVLLLVWVPGIRSAITCRSCQLFDKWSGRELLVRMDGSISSTT
GSVGKVIDNNEDGSMALSNSTGAETGQLVTHSDCAADGEKCAHYERKRNTDLHSNKAVEG
KMPPYGKQGSMDPHGKVSNPELAGLQVVRTGSVPVELKRRVRRGARESVMSTDAPRARVF
GNGSLRAARRVPRSDLRWNREDRRPATSRQEDLKLTSSTFALTGDSAHNQAMVHWSGQNS
SVILMLTKLYDFNLGSVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIML
LTDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRR
WQLVHERVAPNRFYWSKLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGY
IDPNSLVVQDEYVFVQVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKGLHVISTDENRVVA
AVQEWNQNDTFNLYVSESGGVYYALALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKL
NNEVKTYITYNRGRDWRLLQAPSADLRGNRVHCILPYCSLHLHLHVSANPYTSGNIASRE
SAPGIIVASGSIGAELSSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPL
PIRHLWLSFDEGRVWNKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVTHRSEWQLVKIDF
RSIFNRRCVESDYVPWNLHDQNEHCLMGVKRVYRKLKAIARCVMGKTYSVTMISEPCDCN
ESDFECDYGFERRSDGKCTPAFWFLPSSVSRSCTTEHTFLNSTGYRKVVSNNCTGGVMEQ
YTARRQVCPSQAPRGLHLVTSEGKLTASLASNVTFLVFLEEGDGSRTSITVDFGDGNAFT
YSNVSSIEDGIKHIYKNVGIYRVSATAENRLGSETVLLFLHVTCQLESIHLSAPFVAVKN
KEVNLTVVLWPSQVGTVTYIWWFGNNSEPVITLEGSVAFTFSREGINVVTVQVSAGNNIL
QDRKTIAVHEYFRSNLLAFSSNLDDHNPDVAEWRLDVSRVIKVSMVQATGVSPEQLLVTV
LPGLPTASEFFLLPDKQLTEGKPDKTSTHLDQLSELVLSALNQNLVQFTLRPGVQITVYA
AHLSAAPLVDTSENHSGSAMLMLLSVVVLGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEM
IQSPVSPTDSTPSCSSQKELLTTLEPLEPLDPELNTQAIECIKPHPRVKFSSDLPTYMDV
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggaaaccgaaatcaccggtttaatgtcagcgctttttgcgccttggtactg
ttgctcgtctgggttccggggatcagatcggcgataacttgccggtcgtgtcagctgttt
gataagtggagcggtcgggaattactggtgaggatggacggtagcatttcgtccacaaca
gggtctgtgggtaaagttattgacaataatgaagacgggtcaatggcgctgtctaattcg
actggtgctgaaaccgggcagctggtcactcatagcgattgcgctgcagatggcgagaaa
tgcgctcactacgagcgcaaacggaataccgaccttcactcaaataaggcggtggaaggc
aaaatgccaccgtatggtaaacaggggtccatggaccctcatggcaaagtttcaaacccc
gaactggcaggtttacaggtcgtgcgcacaggttcggtccctgttgagctcaagcgaaga
gtgcgcagaggcgctagggaatccgtcatgtcaaccgacgcgccccgagcgcgggttttt
gggaacggctccttgcgggctgctcgcagagtcccgcgctctgatttgaggtggaacagg
gaagacaggagaccggccacatcgcgacaggaggatctgaaacttaccagctctaccttc
gcgttgactggggattccgcacacaaccaagccatggtgcactggtccggtcaaaacagc
agcgtaatcctaatgctgaccaaactgtatgacttcaacctgggcagtgtgaccgagagc
tccttatggaggtcaacagactacggtaccacttacgagaagctcaacgagaaggtgggc
gtgaaaaccatcctcagctatctatacgtcagccctaacaacaagcgcaagatcatgttg
ctgacagacccggaggtggaaagcagtttgctcatcagctcggacgaaggcgccacctat
caaaaatatcgtctcaacttctacatcctcagcctgctttttcatccagagcaggaggac
tggatccttgcctacagccatgaccagaagctctacagttcggtcgagttcggccgtcga
tggcagctcgttcacgagcgggtggcgcccaatcgattttactggtctaagctgggcctt
gataaagagccgggcctgatccacctggagaccagtatctcagaaacccaggctctttat
gtcacatgtaaacttcagaactgcacagatgctaacaagggtaaaccgtttccgggatac
attgaccctaactcgctcgtggtccaagatgagtacgtgtttgtccaggtgtcaaccggt
ggtcgtccaatatactacgtgtcatccagacgggacgtgtttacacccatgaagcttccc
aaatacacccttccgaagggtctgcatgtgatcagcacggatgagaatcgtgtcgtagcg
gcagttcaggagtggaaccagaatgacacttttaacctgtacgtgtcggagtctgggggc
gtctactacgcgctggctttggagaacgttatgagtagcatgggtcctgagggaaatgtc
atgatagatctgtatgaggtggcagggattaaaggaatgttcctggccaataagaagcta
aataatgaggtgaaaacgtatataacttataacagaggcagagactggaggcttctacag
gccccgtcagctgatctcagaggaaacagagttcactgcatactgccgtactgctccctg
catcttcacctgcacgtgtcagcgaacccatacacgtccgggaatatagccagcagagag
tcggcacctggaatcatagtggcatcaggttcaataggtgcagagttatcgagcagtaac
gttagcatgttcatcacatccgacgctggaaacacgtggcgacagatatttgatgaagag
tacagcgtgctttatctagaccagggcggggctttggtcgctattagacacacccctctt
cccataaggcacctctggttgagttttgatgagggaagggtctggaacaaatacagtttc
acctcatcacccctatttgtggatggagtgttgggggaaccaggcgaagagactcttatt
atgacgatctttgggcacgtcactcatcgctccgaatggcagctggtaaagatagacttc
aggtctattttcaacagaagatgcgtcgaatctgactatgtgccttggaatttacatgac
cagaatgaacactgtctcatgggagtgaagagggtctatcgaaagttgaaggccatagcg
aggtgcgttatgggtaaaacttactctgtcaccatgatttccgagccctgtgactgcaat
gaatccgactttgagtgtgattatggtttcgagagaagatctgacggtaaatgtactcca
gcgttctggttcctcccctcctccgtgtctcgaagctgcaccactgaacacacgttcctc
aacagcaccgggtatagaaaggtggtgtccaataactgtacaggcggcgtgatggagcag
tacacagcccgtaggcaagtgtgccctagccaggccccgcgcggcctccatctagtgacc
agtgaaggcaagctaacagctagtcttgctagcaacgtcacctttctcgtcttcttggag
gagggcgatggatcacgaaccagcatcactgtggatttcggagacggaaacgccttcact
tactccaatgtgagctcgatcgaagacgggattaaacacatctacaagaacgtgggaatc
taccgcgtgtcagcaacagccgagaaccgtctggggtctgaaaccgtccttcttttcctg
cacgttacgtgtcagttggagtccattcacctctcagccccgttcgtggctgtgaagaat
aaagaagtcaatctgactgtggttctctggccgagccaagtgggaacggtcacctacatc
tggtggtttgggaataactctgagcccgtgatcacgctggaggggagcgtggcattcacg
ttctcccgggagggaatcaatgttgtcaccgtacaggtgtctgctgggaacaacatcctg
caagacaggaaaaccatcgctgtccacgaatacttcagatccaaccttctcgccttttct
tccaatcttgacgatcacaaccctgacgtggctgaatggagacttgatgttagtcgagtc
attaaagtctctatggtgcaggcgacaggtgtgagtccagaacagctgttggttactgtt
ctgcccggactgccaacagcatctgagttcttccttttaccagacaaacagctgacagag
ggaaagccagacaaaacatctacacacttagaccagctctcagaactggtgctcagtgct
ctgaatcagaatctggttcagttcacactcagaccgggagtccagatcacagtatacgct
gcacatttatcagcagcgcctctagtggacacaagtgagaatcacagtggctcagctatg
ctcatgctcctctctgtggtcgtgttgggtttagctgtgttcctcatctataaattcaaa
aggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaaagaacaagaaatg
atccagagtccagtgagccccactgacagcacacccagctgcagttcacagaaagagctg
ctcacaacactggagccactggagccactggacccagagctcaacacccaggccatcgaa
tgcatcaaacctcatccacgtgtcaaattctcatcagatcttcccacatacatggacgtt
tga
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