Triplophysa dalaica: 130408009
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Entry
130408009 CDS
T09616
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03030
DNA replication
tdw03410
Base excision repair
tdw03420
Nucleotide excision repair
tdw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130408009 (rfc2)
03410 Base excision repair
130408009 (rfc2)
03420 Nucleotide excision repair
130408009 (rfc2)
03430 Mismatch repair
130408009 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdw03032
]
130408009 (rfc2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130408009 (rfc2)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130408009 (rfc2)
DNA replication proteins [BR:
tdw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130408009 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
130408009 (rfc2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130408009 (rfc2)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130408009 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
130408009 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
MipZ
AAA_19
nSTAND3
AAA_18
DNAX_ATPase_lid
AAA_5
ABC_tran
AAA_28
AAA_23
MeaB
AAA_25
AAA_30
Gp44_lid
SLFN-g3_helicase
RNA_helicase
NTPase_1
eRF1_2
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130408009
NCBI-ProteinID:
XP_056587373
LinkDB
All DBs
Position
19:complement(9985406..9991553)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKETESVQCQVDAPSKKEDNAPKSSTTAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPSMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKVIEQLWLLGYSPEDIIGNIFR
VCKTLQMPEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagatgaaagagacagaaagtgttcaatgtcaagtcgacgcgccgtctaaa
aaagaggataatgcacctaaatcatcgacgactgcttatgaactaccatgggttgaaaaa
tacagacctctaaagttgaatgaaattgtcgggaacgaggaaactgtcagcagactggag
gtgttcgcaagagaaggaaatgtgcccaacatcatcattgctggtcctcctggtactgga
aaaactaccagcattttgtgtctggctagagctcttcttggtccatccatgaaagatgct
gtgctggagctgaatgcctccaacgaccgaggaatagatgtcgtgagaaacaagatcaaa
atgttcgcacaacaaaaggtcacgttaccaaaaggtcgccacaagattatcattttggat
gaagctgacagtatgacagatggggctcagcaggctctgagaagaaccatggagatatat
tctaaaaccacacgctttgccctggcctgcaatgcatcagataagatcatcgagcccatt
cagtcccgctgtgcggtgctgcgttacagcaaactgagagacgagcagatcatgatgcgt
ctgatggaggtggtagaaaaggagaacttgcatgtcaccaatgatggccttgaagccatc
atcttcactgctcagggggacatgagacaggctctgaataatttgcagtcaacaaattct
ggatttggctacatcaacagtgaaaatgttttcaaggtgtgtgatgagcctcatcctctg
ctggttaagagtatgctggaacactgtgtcaatgctaacattgatgaagcctataaggta
attgaacagctttggttgctaggatactcaccagaggacataatcggaaacatctttaga
gtttgtaagaccttacagatgcccgaatatttaaagctggaatatataaaggagatcggg
tatactcatatgaaggtggcagaaggggtgaactctctattacagatggctggactgttg
ggtcgactttgcagcaagactgcgacaccagatgcaagctaa
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