Triplophysa dalaica: 130408099
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Entry
130408099 CDS
T09616
Symbol
cacna1bb
Name
(RefSeq) probable voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130408099 (cacna1bb)
04020 Calcium signaling pathway
130408099 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130408099 (cacna1bb)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130408099 (cacna1bb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130408099
NCBI-ProteinID:
XP_056587524
LinkDB
All DBs
Position
19:complement(5339318..5448059)
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AA seq
2201 aa
AA seq
DB search
MDKTPMSERLDDTEPYFIGIFCFEASIKIIALGFVFHKDSYLRNGWNVMDFVVVLTGILT
TLGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAII
GVEFYMGKFHFTCFKIETGERDGDYPCGTESPARTCPNDTECTGYWKGPNFGITNFDNIL
FAILTVFQCITMEGWTDVLYHTNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDVLKRAKT
RKGRNDLIGAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRVRFFIRRM
VKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTQALYLAEFVFLGLFLTEMTLKMYGLGP
RNYFHSSFNGFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIMTVFQ
ILTGEDWNAVMYHGIESQGGVRTGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAAKKSIALQKAMEVKEVSPMSAANISIAAFVKQNRDEISRRSSVCSVHSLI
EQQRSLQKMSIWEQRTNQLRRHNVRSSSEALYNELEPEERLRVSSALHLRPDMKTHHDRP
LVVEHRDSTQDDPKLLEGKRAEGDPDTLEFQTSSAHPRKYHRCRGENGDAGDGRHHRHHS
RNRDLRGGLERTASQDGGHRYHHSPGSPEEGREVEERENRHHRSRRSNGNGNGTIGNGGR
VRGHREGEVNNGERRKHRQRVKAQSTLDGEEFRENEGRGYRARPTETGDNSLATSPNQSP
TEDKPENTDNLKNNTRVGLTGVNIPVTITAPPGETAIIPMNDIDGDSNPLNEEKKDLDEL
NQDAPKHILPYSSMFVFSPSNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAEDPVHAD
APRNNVLKYLDYVFTGVFTFEMIIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAC
SGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKSVFDCVVNSLKNVLNILIVYILFMFIF
AVIAVQLFKGKFFHCTDESKALEKDCRGQFLEYGSDGMAMTRPREWKKYDFHYDNVLWAF
LTLFTVSTGEGWPLVLKHSVDATYEDQGPSPGYRMETSIFYVVYFIVFPFFFVNIFVALI
IITFQEQGDKAMSDCSLEKNERACIDFAINAKPLTRYMPQDKQSFQYKMWKFVVSTPFEY
SILTMIAVNTVVLMMKFYDAPKPYEDMLKWLNTFFTALFTLECVFKVIAFGPLNYLKEAW
NIFDFVTVLGSITDILVTELKDKRINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFK
ALPYVCLLIAMLFFIYAIIGMQVFGNIELSDEFAINHHNNFQTFFQALMLLFRSATGEGW
HDIMLACLGDRPCEKGSGSSGRECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLT
RDASILGPHHLDEFIRVWGEYDPAACGRLRYMDMYSLLRVISPPLGLGKNCPNRVAYKRL
VRMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQHLCDAELRKEINKVWPNLSSKT
VDLLVTPHKYNELTVGKVYAALMIFDYYKQNRAKRLQQQQPTSGTQSKVGVLFKPMLPLT
HLHEQVPLMPKDPPPCQSVSTPQPELTPTSFHMTNGDTILYSSAMKTSLSGDFPQEDIRE
ANRQSVQRGHSDEVPNTSTSQELLEMTYMENDSDVDGYPVMEGHGRAASMPRLNAGYQRS
HIRHTAGTYLAPITDVSPMRRSTSSLTPHRGVQEVSLCEYDLERPEVAMGQILGQERDGE
RGRHHHHHHHHRCQRRRDKKHKSLDRAISEEQPSTTADPNFESLPRERARERDRGRSHER
KHHSSSAVERKQRYYSCDRYGNHEHSHSLSAGPSRSTSPGEPHDRLKQGSSTAKGSSMVH
TSGTSTPSRGRRQLPQTPLTPRPAVAYKTANSSPVQLNTAQSTSPCPARLSRGLSEHDTL
LSGNAYRQSPVPVTRIGSDPSLGPFQQDSHFSDAEDFQDALSTYGTGRSPRTYAASGSML
LSRSQSGVPNGYHYSLGVSAASGSSGRASGSYQEKERDDWC
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacgcccatgtctgaacgcctggacgacacggaaccctactttatcgggata
ttctgtttcgaggccagcattaaaatcatcgccctgggcttcgtctttcacaaagactcg
tacctacgcaatggctggaatgtaatggactttgtggtcgttctgacggggatcttaacc
actttgggctcacagtttgacttgaggacactgcgggccgttcgagtgctgagacccctc
aaactggtgtcaggaattccaagtcttcaagtagtattgaagtctataatgaaggcgatg
gttcctcttcttcagattggtctgctgctcttctttgccattgtcatgtttgctatcatt
ggtgtggagttttacatggggaagttccacttcacttgctttaaaattgagacaggagaa
cgggatggtgattatccatgtggtacagagtctcctgcaagaacgtgtcccaatgacacc
gagtgcacggggtattggaaaggacccaactttggcatcacaaactttgataacatcctt
ttcgccatcctcacagtcttccagtgcatcaccatggaaggatggactgatgtgctttat
cataccaatgatgcctcggggaacacctggaactggttgtactttatccctctcatcatc
atcggctcattcttcatgcttaacctcgtcctgggtgtcttatcaggggaatttgccaaa
gagagagaacgggtggagaagcgtcaggagttcttgaagctccgcagacagcagcagatt
gagagagagcttactggatacctggagtggatctgcaaagcagaggaggtattgctggct
gaagaggaccagaatgctgaggagaaatctcctctggatgtcctgaaaagagctaagacc
aggaagggtagaaatgacctcatcggtgcagaggaaggagaggaacatttcacagacata
tcgtccgtcgcgccccctggatcaccttttgccagagctagcctgaagagcagtaaaaat
gacagctcatcgtacttccgtcgtaaggaaaagagggtgcgcttcttcattcgaagaatg
gttaaagcacaaagtttctactggatcgttctgtgtttggtgggactgaatacattgtgt
gtggccattgttcattacgaccagcccgagtggctcacccaagccctgtacctggcagag
tttgttttcctgggtctgtttctgacagaaatgaccctgaagatgtacggcctggggccc
cgaaactactttcactcctcattcaacggttttgactttggggtgattgtggggagtatt
tttgaggtagtgtgggcagcgattcagcccggtgcgtcttttgggatcagtgttctgaga
gcccttcgtctgctccgtatttttaaagtcaccaaatattggaactctctgaggaatctt
gttgtttctctgttgaactcaatgaagtccatcatcagcttgctcttcctcctcttcctc
ttcatcgtggtgttcgccctgctgggcatgcagctcttcggaggccagtttaattttgaa
gatgaaacacccactacaaactttgacagcttccctgcagctataatgacagtcttccag
attttgacgggagaggattggaacgcagtgatgtatcatgggattgagtctcagggtggc
gtccggactggaatgttctcttctgtctacttcatagtgcttacgctttttggaaactac
acgcttctcaatgtatttttggctatcgccgtggataaccttgccaatgcgcaggagctg
acaaaggatgaagaggagcaagaggaggcagcgaagaagagcattgcacttcagaaagcc
atggaggtgaaggaggtcagtcccatgtctgcggccaacatctcgatagcagcttttgta
aagcaaaatcgagatgaaatctctcgtagatcttcagtctgcagcgttcattcacttata
gaacaacagaggtcccttcagaagatgtccatatgggagcagcgcaccaatcagctgcgc
agacacaacgtgcgcagcagcagcgaggccctctacaacgagttagagcctgaagagcgc
ctgcgcgtgtcttcggctctgcatctgcgacccgacatgaagacccaccatgatcgcccg
ctggtggtggagcatcgagatagcacccaggacgatcctaaactcttagagggaaagagg
gcagagggagatccagacacattagagtttcaaacctcctccgcccacccacggaaatac
caccgatgtcgaggagagaacggagatgccggcgacggacgacaccacaggcaccacagc
cgaaaccgagacctccgtgggggtctggagcgcacggccagtcaggacgggggacacagg
tatcatcactcacctggatctcctgaggagggcagagaggtggaggagagagaaaataga
caccaccgctcaaggaggtctaatgggaacgggaatggcacgattggtaatggaggcagg
gtacgtgggcacagagaaggtgaagtaaataatggagagaggaggaaacatcgccaacgt
gtgaaagctcagtccacgctggatggagaggaattcagggagaatgaaggcagaggatac
agggccagaccaacagaaacgggggacaacagtttagccaccagccccaatcagtcccct
actgaagacaagccagaaaacacagacaatctgaaaaacaacaccagagtcggtctaacc
ggagtcaatatccccgttaccataactgccccaccaggagagaccgccatcattcccatg
aacgacattgatggtgacagcaacccactgaacgaagaaaagaaagatcttgatgagcta
aatcaggacgctcctaaacacatcctgccatacagctctatgtttgtgttcagcccttcg
aaccctgtgcgacggctttgtcattatgtggtcaacttgcgttactttgagatgtgtatt
ctcacggtaatcaccatgagcagcattgcgctggcagccgaggaccctgtgcatgccgat
gccccccgcaacaatgtgctgaagtacttggactacgtcttcactggtgtgtttacattt
gagatgattataaagatgatcgatctcgggctcctgttgcatcctggagcttacttcagg
gacctgtggaacatactggacttcattgtggtcagcggtgctcttgtggctttcgcctgc
tcaggaaccaaaggaaaggacatcaacaccatcaagtccctcagagtacttcgagttctg
aggcccttaaagaccatcaaacgtttacccaaactcaagtctgtgtttgactgcgtggtg
aactctctgaagaatgtgctcaacatcctcatcgtctacatcctcttcatgttcatcttc
gccgtcatcgccgtgcagcttttcaaagggaagttctttcactgcaccgacgagtccaaa
gccctggagaaagactgcagggggcagttcctggagtatggcagcgatggaatggccatg
acacggccacgggaatggaagaaatatgattttcattacgacaacgtcctgtgggccttt
ctgaccctgttcaccgtatctacaggagaagggtggccattagtactaaaacactctgtg
gacgccacgtacgaggaccagggtcccagtcccggctaccgcatggaaacctccatcttc
tacgtggtctacttcatcgtctttcctttcttttttgtcaacatctttgtggccttgatc
atcatcacgttccaggagcaaggggataaagccatgtcagattgcagcttggagaagaac
gagcgagcttgtatcgacttcgccatcaacgccaagcctctgacccgctacatgccccag
gacaagcagtcttttcagtacaagatgtggaagtttgtagtgtccacccctttcgaatac
tccatcctgaccatgattgccgtcaatacggtggtcctcatgatgaagttttatgatgct
cctaagccatacgaggacatgttaaagtggctgaacaccttctttacagctctctttacg
ctggagtgcgtcttcaaggtcatcgccttcggccctctgaactatttgaaggaggcatgg
aacatttttgactttgtgactgtgctgggaagcatcacggacatcttggtcacagagctc
aaggacaagcggattaatctgagtttcctgagactcttccgggccgcccgtcttattaaa
ctcctccggcagggatacaccattcgcatcctgctttggaccttcgtccagtcttttaag
gcccttccgtatgtgtgtctcctcatcgctatgctcttcttcatctacgccatcatcggg
atgcaggtgtttggtaacatcgagctgtccgatgaattcgccatcaaccatcacaacaat
tttcaaacgttttttcaggctttaatgcttttgttcaggagtgctacaggggagggctgg
cacgacatcatgttggcatgtttgggggacagaccgtgtgagaaaggctccggctcaagt
gggagagagtgtggcagtgatttcgcttacttctactttgtctctttcatcttcctctgt
tcatttctgatgctgaacttgtttgttgccgtcatcatggataactttgagtacctgaca
cgtgacgcttctattctcgggcctcatcacctggacgagttcatccgcgtctggggggag
tacgaccctgctgcttgcggaaggctacgctatatggatatgtacagtttgttgcgcgta
atctcgccccctcttggcttaggaaagaactgccccaacagggtggcatataagcggctg
gtgaggatgaacatgccgatagccgacgacaacactgttcactttacctccactctgatg
gctctcatccggaccgccctggagattaaactggcatcaggcgttctggctcagcacctg
tgtgacgctgaattgaggaaggaaataaataaagtgtggcctaacttatcttcaaaaacg
gtggatttactggtgacacctcataaatataatgagttgacagtaggaaaagtttatgct
gccctgatgatttttgactactacaagcaaaaccgtgccaagaggctccaacagcagcag
ccaacttcgggcacacagagtaaggttggagtcctcttcaaaccaatgcttcctcttaca
cacctgcatgaacaggtgccactgatgccaaaagacccgcccccctgtcaatcagtttcc
actccacagccagagctcacgcccacaagctttcacatgaccaatggggatacaatacta
tacagcagtgccatgaaaacgtctctctcgggggactttcctcaggaagacatacgggaa
gcaaacaggcagtctgtccagcgtggccattcagatgaagtgccaaacacatccacatct
caggaattattagaaatgacatatatggagaatgactctgatgtggatggttaccccgtg
atggagggtcacggcagagccgcttccatgcccagacttaacgctggctatcagcggagc
cacatacgccacaccgccggaacgtacctagcaccgatcacagatgtgagtcccatgcgg
cggtctacgtcctcgttgacacctcacagaggcgtgcaggaggtcagtttgtgcgaatat
gatctggagaggcccgaggtagctatgggccagatccttggtcaagagagagatggggag
agaggacgtcaccaccatcaccaccatcatcatcgctgtcagcgacgcagagacaagaag
cacaaatcactggatcgagccatcagcgaagagcagccgtccactacagcagatccaaat
ttcgaatcgttgcctagggaaagagcacgagagcgagaccgtgggcgctcacatgagagg
aagcatcattcgtcctcagcggtggagagaaagcagcgatactattcgtgcgatcgctac
ggcaaccatgaacacagccacagcctgtcagccggacccagtaggtccacatcaccggga
gaaccacacgacaggctcaaacagggaagtagcacagctaaaggaagttcaatggtccat
acctcaggcaccagcacacccagccgtgggcgtagacagctaccccagacgcccctcacc
ccgcggcctgccgttgcctacaagactgccaactcctccccggtccagctcaacactgcc
cagtctacatcaccctgccctgctcgccttagtcgtggcctttcggaacacgacacccta
ctcagcggaaatgcctaccgccaatcccccgtgccagtcactcgtatcggctccgacccc
agtttaggcccctttcaacaggactcgcacttctccgatgccgaagacttccaggatgcc
ttgagcacgtacggcacgggccgttcccctaggacctatgcggcatcaggctccatgcta
ctctcgcgcagccagagcggcgtgcccaacgggtatcactactcccttggagtgagcgca
gcctccggatccagcgggagagcttccggaagctatcaggagaaagaaagagatgactgg
tgttag
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