Triplophysa dalaica: 130408117
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Entry
130408117 CDS
T09616
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
tdw
Triplophysa dalaica
Pathway
tdw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130408117 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130408117 (sec24a)
Membrane trafficking [BR:
tdw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130408117 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
130408117
NCBI-ProteinID:
XP_056587557
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All DBs
Position
19:complement(19259001..19270148)
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AA seq
1027 aa
AA seq
DB search
MSSSGFASQNGAGGTYANGPSPNPVSLYPSNQGYMAPPQPTYLNSTLAKAPTPPGPNTNR
HQPSPVGMSQHSPHQSASPNHRPVLTSASQSSTTPPNSYYQHPQQPPSWHYGGASPPAAN
HISSALGPSAYSSGASTLPVFQNTMQPVGPVPPYSSLSSVAMPAPPALNVLAPQTHPPYG
IPPTAMRGTPPPPAAGVPPPPPHAYHNDAGSYSSQPGQMNRPMGMAYPSLQPPSYQSMPG
MQTSPYIQPTAQPYQQPSVGTAQLSPSLAALSLQSETPEALRVVNLLQERNLLPLGTVTV
PTPCLPQDLQKLNCSPEVFRSTLTSIPQTQALLNKAKLPLGLLLHPFKDLSQLPVVTSSN
IVRCRSCRTYINPFVSFMDQRKWKCNLCYRVNDVPEEFMYNPVSRSYGTPHKRPEVQNAT
IEFIAPSEYMLRPPQPAVYLFILDVSHNAVETGYLDVVCQTLLENLDVLPGDTRTKIGFI
TFDSTVHFYNLQEGLSQPQMLIVSDIEDVFIPTPDCLLVNLKEGKELVQDLLKSLPQMFC
KTMETQSALGPALQSAFKLLSPTGGRMSVFQTQLPTVGAGALKPREEAAQKTSAKDVQHL
APATDFYKKLALDCSGHQVAVDLFLLSAQYCDLSSLGCISRYSAGSVHYYPSYHKHHNPS
QSERFQKDLKRYLTRKIGFEAVMRIRCTKGMSIHTFHGNFFVRSTDLLSLPNVNPDAGFA
VQMSIDENLLDMQAVSFQAALLYTSSKGERRIRVHTLCLPVVNSLSDIFAGADVQAITCL
LASMAVDRSVSASLSDARDALTNAAIDSLTSYRTSVLTIQQPGLLIPTCLRLFPLYILAL
LKHKAFRTGTSAPLDERVFAMCQLKYQPLAYIMLMIHPALYRVDDMTDEGALNIDERTIP
QPRALQLSVEKLSRDAAFLMDNGTVMYLWIGRNCSPAFITQVLGVESYAAIPQNMTQLPE
LDTSESSRTRAFIDWLRERRPFYPTLHIIRDESQLKADFMQNMIEDRTESALSYYEFLLH
LQQQVSK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagcggcttcgcgtcacagaatggcgctggagggacgtacgccaacggtccc
tcaccgaatcctgtttcactttacccctcaaatcagggctacatggcaccaccacagcca
acctacctgaacagcacgctggccaaggccccaacaccacctgggccaaacaccaaccgg
caccagccttcacctgtcggcatgtcccagcactccccacatcagtctgcatcgcccaat
cacagacccgtcctgacttctgcctcacagagctccaccaccccaccaaacagctactac
cagcatcctcagcagcctcccagctggcactatgggggtgcgtcgccacctgcggccaat
cacattagctctgctctgggcccatcagcgtacagcagcggagctagcacacttccagtc
ttccagaacactatgcagcccgttggaccagtgccgccctattcctctctgagcagcgtt
gctatgcctgcgccacctgcgctgaatgttttggcacctcagacccatccgccgtatggc
atcccacccacagctatgagaggaaccccgcctccaccagccgccggtgtaccaccacca
ccaccacacgcctaccacaatgacgcaggatcatattcctctcaaccaggacagatgaac
agaccgatgggcatggcctacccctcactccagcccccttcttaccagagcatgccaggc
atgcagacgtcaccgtatatacagcctacagcacaaccataccagcagccgtctgtcggc
acggctcagctcagcccatctctagcagcattaagcctgcagtcagagaccccagaggcc
ctgagggtagtcaaccttcttcaggagcgaaatcttcttcctctaggaacagtcacagta
ccaactccttgcctgcctcaggacctgcagaaactcaactgcagtccagaggttttccgc
agtactttaaccagcatccctcaaacacaggcgctactgaacaaagccaagcttcctctc
ggcctcctcctgcacccatttaaagatctttctcaacttcctgtggtgacgtccagtaat
attgtgcgctgtcgctcttgtcggacatatatcaacccatttgtgtccttcatggaccag
agaaaatggaaatgtaacctgtgttacagagttaatgatgttccagaagagttcatgtat
aatcctgtcagcagatcatatggaacgcctcataaaagaccagaggttcagaatgcaacc
attgagttcatcgccccctcagaatacatgctgagaccaccacaaccagccgtatacctg
ttcatccttgacgtgtctcacaatgcagtggagaccggatatctggatgtggtctgccag
acacttctggagaacctggatgtgctccctggagatactaggacaaaaatcggtttcatc
acgtttgacagcactgtccatttctacaacctccaggagggtctttctcaacctcagatg
ctcatcgtgtcggacattgaagatgtctttataccaacaccagactgccttttagtcaat
ctcaaagagggcaaggagctggtccaggatttgttgaagagcttgccgcagatgttctgt
aagacgatggagactcagtcggctctgggcccagcgctgcagtccgcatttaaactcctg
tcccccaccggcggacgaatgtcagtcttccagactcaacttcccactgtgggcgcaggg
gctctcaagcccagagaagaggctgctcagaaaacatcagccaaggacgtccagcatctg
gctcctgctacagatttctataagaagctggctctggactgctccggccaccaggtggct
gtggatctctttctgctgagcgcacaatactgtgatctttcatctctaggttgtatatct
agatactcagctggcagcgtccattactacccctcttatcacaagcatcacaacccctct
cagagcgaacgcttccagaaagatctcaagagatatttgacacggaaaatcggctttgag
gctgttatgaggatacgctgcaccaaaggcatgtctatacacactttccatggcaacttc
tttgtccgttccacggatctgttgtctttgcccaacgtaaatcctgacgctggtttcgcc
gtgcagatgtccatcgacgagaacctgctggacatgcaggcagtttcctttcaggccgct
ctgctctacacgtccagcaaaggagagaggaggattcgagtgcacacgctgtgtttgccc
gttgtcaactctctgtcggacatctttgccggggctgatgttcaggccatcacttgtctt
ctggctagcatggccgtggaccgctctgtttcggccagcctcagtgatgctagggacgct
ctgacaaacgcagccattgactcgttgacgtcttatcgcacatcggtgctgaccatccag
cagcccggtctgctgatccctacctgtctgcgtctcttccctctctacatcctcgccctg
ctcaaacataaagcctttcgaacaggtacgagcgcccccctggacgagcgcgtgtttgcc
atgtgtcagctgaagtaccagccgctggcgtatatcatgctcatgatacatccagcgctg
taccgggtggatgatatgaccgatgagggtgctctgaatatcgacgagcgcaccatccct
cagcccagagcgcttcagctgtccgtggagaaactgagcagggatgcagcgtttctcatg
gataacggcacagtgatgtatctgtggattggtagaaactgcagccccgctttcatcaca
caagttctgggagtcgagagttatgctgctattcctcagaacatgacccaacttccagag
ctggacacatcagaatcatccagaaccagagcattcattgactggctgagggaacgacgg
cccttctaccccacactacatatcatcagagatgagagtcaactgaaggctgatttcatg
cagaacatgattgaggatcgcactgaatcggcgctctcttactacgagttcctgctgcat
ctacaacagcaagtgtccaagtga
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