Triplophysa dalaica: 130408151
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Entry
130408151 CDS
T09616
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tdw
Triplophysa dalaica
Pathway
tdw04068
FoxO signaling pathway
tdw04110
Cell cycle
tdw04120
Ubiquitin mediated proteolysis
tdw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130408151 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130408151 (skp2)
04150 mTOR signaling pathway
130408151 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130408151 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130408151 (skp2)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130408151 (skp2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
130408151
NCBI-ProteinID:
XP_056587605
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All DBs
Position
19:complement(8720927..8725696)
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AA seq
413 aa
AA seq
DB search
MSSERPLQELPCLNENLEGSVFRPLRSKLKRRPSCGGGLDSENTPHELIQQWSPPHKKPV
ISVKGKENDENVFVLGRRPRKRRESSAGLCWDSLPDELLLGILSRLSLQDLLRTSRVCKR
WHRLAFDESLWQSVDLVGKAQLDGELGLVLSAGVLRLRCPHTCIGQPAFKSTKQLRVQHM
DLSSCTVETSVLEQIVSRCTHLNNISLEGLVLSDNIICCLGQNTELVRLNLCGCSGFSPE
SLAELLKSCNRLEEVNVSWCDFSSVHVQAISSNILSSVTQLNISGYRQNLTIEDVKAIVE
RCPNLTNLDLSDSVLLTTDSFPFLQQLSSLRHLGLSRCYQIHPASLIDVEKFPNLQTLEV
FGLIQDSYLPILCKGLPHIQINTQPFSTVARPTAATKKDRTLWGMHCRLQYKH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaaaggccacttcaagagctcccgtgtctaaacgagaatttggagggatcg
gtcttcaggcctttgagaagtaaattgaaacgcaggccctcatgcggcggggggcttgac
agtgaaaacactccgcacgagcttatccagcagtggtcacccccacacaaaaagcccgtg
atttctgttaaagggaaagaaaacgacgaaaatgtgtttgttcttggcagacgtcccaga
aaaaggagagaatcatcagctggcttgtgttgggacagtctgccagacgagcttctgctg
gggatcctgtctcgcctctcattgcaagatcttctcagaacgtctcgagtctgcaagcgc
tggcatcgtcttgcgtttgatgaatctttgtggcaaagtgtggatttggtgggaaaagct
cagttagacggtgagcttggactggtactctcagctggagttttgaggctgcgctgtcca
cacacctgcatcggccaacccgcatttaaaagtacaaaacaacttcgtgtccaacatatg
gatttgtcaagctgcacagtagaaacctctgttctggaacaaattgtgtctcgctgcaca
catctaaataatattagccttgagggcctagtgctctctgacaacattatttgctgtcta
ggtcagaatactgagcttgtccggctgaacttgtgtggctgttctggtttctctcccgaa
tctctggctgaattgctgaaatcatgcaatcgacttgaagaagtaaatgtatcatggtgt
gatttcagcagtgtgcatgttcaggccatttcaagcaatattctctccagtgtcactcaa
ctgaacattagtggttacagacagaacctaaccatagaagatgtcaaggctatagtagaa
agatgtcctaacctcacaaatctagatttaagtgacagcgtccttttgacaacagacagt
ttcccatttctgcagcagctttcctcacttagacatctgggactgagccgttgttatcag
attcacccagcttctctcattgacgttgaaaagtttccaaatttgcagaccctggaggtc
ttcgggctaatacaggacagctatctgcccattctgtgtaaaggtcttccacacatacag
atcaacacacaacctttctctactgtggcacgtcctactgcagctacaaagaaggatcgt
actctttggggaatgcactgccggcttcagtacaaacattga
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