Triplophysa dalaica: 130408273
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Entry
130408273 CDS
T09616
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130408273
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130408273
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
zf-C2HC_2
MscL
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
130408273
NCBI-ProteinID:
XP_056587740
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All DBs
Position
19:11810653..11821830
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AA seq
1485 aa
AA seq
DB search
MAPIRIKHVVSFTSQDSKNQVDNLCDINGNSRPWLCSMQDRSGVLRVDLQMERAAPIGFI
DVGNFGSAFIQIDVGRSSWSLDHPYVTLLPTATLMTPAESRQGTGRQSVRMFKKADFLSP
AAEESWDRLRVTCTQPFNKQLQFGLSFLRVRSTENQTEDTSCQAPAPQNLRTPDKMTSVK
QWLSSPAVQNKFFGRIAGDASPDYAKRSPESLSWAGRMVIAARSNRQSVSTSPSSSTSST
TSQKNNSMNSSPDSSGLGTSSVKSRTPEEHKRKAQARQCLVNRGTALKRTRPAASPTLKT
ISTCSTKGLRTEKPSSPCSQSPADMWARTSSSPQTSTDLISPETMCPLCGVSFSLAYLPL
HASTCMDSDPTEFSGVLETAVVTSQSSSPVFGAGTDESMVPCPLCSVRFPPDRIQQHAST
CGDTAESSVVWLDWMENLTQEQWREIVNKKFCFPPELIGAIHERNIQMVSSLLKTGDGII
RQLDDSEDRLWREALNLSIRLGNEDTMDSLLQGIKFDFRQIHEALLVAVDTNQPRVVKRL
LDRLDLEKGNKMDVRSFSMAIFDQSIDDSQFAPGVTPLTLACQKDLYEIVTMLKQKGHEI
PWPHKISCSCLECTNGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFRLSRDLR
KLSKKEPEFKPQYLSLEEICQEFAVELLGMCRNQSEVTTILNSCSHLDEDSEDELDQQAF
EEGIPNLARLRLAVNHNQKQFVAHPICQQVLSSIWCGSLSGWKGSRTTWKLLVSFIIFLT
MPLLCLIYWIAPKSKLGKILKIPVIKFLLHSASYMWFLITLLGESIAMEIYRESFASRHQ
NILHNSFHMVWVVGFFWFECKEVWIEGLRCYFLDWWNCLDMMVLSMYLASFALRMVILLK
GIFLCESPESQDECIYFTDTSRDRWHQEDPQFISEVLFAVTSMLSFTRLAYILPAQESLG
TLQISIGKMIDDMMRFMFILVIIGTAFLCGINNTYVPYVISPNLGRLNETFRFLFWTMFG
VAEQTYVDMPEFALAEFVGRVLYGIYTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFA
RSKLYLSYFREGLTMPVPFNIIPSPKALFYLLRGTFRKICCCCLNCNSPPDYPPISSLDD
KGTGEGRISYRHQVIRALVQRYIESARREFEETKRKDVGNRITELSKVVVRLHTEMKQIN
SGALDYSSNISEGSSEGSSFLGKYIVGAKNNFKDFSTERKPAPLTPVHQEEPEDEPEETG
RDGETTDTQESPACDTEADKESTGEPTIEGGIDNVIEEHTVDIDETDGNDEDVQIIVENN
TDGEQTEDKNETVIEIETNTDTESESERDSGGADETLMRDEAADNTEGLETDEGLETTDV
NQSEESEARTEMQENEDGEGNDGGLEDSNDGSQCEGSEESEEMSIDLNKGSLVTFLAKRI
EEKLEMKDMKLIFSGKQASSSPTGSDVSHDTGFGSQFDLSANSPE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggctccgatcaggataaaacatgtggtctcgtttacatcacaggacagcaagaatcaa
gtggataatctgtgtgacatcaatggcaacagcaggccatggttatgtagtatgcaggac
cgcagtggagtactgagggtggacttacagatggagcgtgcagctcctataggctttatt
gatgttggcaacttcggctctgcctttattcagattgatgttggccgttcctcttggtct
ttggatcatccctatgtcacgctgctgcccaccgccacactcatgactccggccgaatca
aggcagggcactggccgccaaagtgtgcgcatgtttaaaaaagctgattttctctctccg
gctgctgaggagagctgggacagacttagagtgacctgcacacagccttttaacaaacag
ttacagtttggtctatcgtttttgcgcgtgcgctccacagaaaaccagacggaagacact
tcatgccaagcacctgctcctcaaaacctgcgcacaccagacaagatgacatcagtgaaa
cagtggctctccagcccggctgtccaaaacaaattttttggaagaatcgcaggtgatgcc
tctccagattatgccaaaaggagccctgagagtttgagttgggcaggacgcatggtcata
gctgcccggtctaatagacagtctgtttcaacatccccttcgagctctacatcaagtaca
acatctcagaaaaacaacagtatgaattcctcaccagattctagtggccttggtacttcc
agtgtaaaatcgaggacccctgaggaacacaagaggaaagcacaagcaagacaatgcctt
gtaaaccgtggcactgcattgaagaggaccagacctgcagcctctcctacacttaaaacc
atctcaacatgctcaaccaaaggtttgagaacagagaaacccagtagcccttgcagtcag
agcccagcggacatgtgggcacgtacatcctcttctccgcagacctctactgacctcata
tctcctgagaccatgtgtcctctttgtggagtgtctttcagtctggcatacctgcctctc
catgcttccacctgcatggattctgatccaacagagttttcaggagtcttggaaacagcg
gttgtgacctcacagagctcttctcctgtttttggcgcgggcacagatgagtcaatggtt
ccgtgtcctctctgctccgtcagattccccccagaccgcatccagcagcacgccagcacc
tgtggcgacacagctgagtcaagtgttgtatggctggactggatggaaaacctcacgcaa
gagcaatggcgagagatcgtgaacaaaaagttctgctttccgccggagctcattggcgcc
atccacgagaggaacattcaaatggtgtcatctctgctgaagacgggtgacggcatcatc
cgtcagcttgatgactctgaagacagactatggagagaagcattgaacctctccatcaga
ctgggcaatgaggacaccatggacagcctcctccaaggcatcaagtttgacttccggcag
atccacgaagctcttttggtggccgtggataccaaccagcctcgtgtggtcaagcgtctt
ctcgaccgtctggatctagaaaaaggaaataagatggacgtccgctccttctctatggct
atttttgaccaatccattgatgattctcagtttgcccctggagtcacaccgctgacgttg
gcctgtcagaaggatctgtatgaaattgtgacgatgctcaaacagaaaggacacgaaatc
ccatggccccataaaatctcctgctcttgtctggagtgcacgaacggccggcagtatgac
ttgcttaagttctcactgtctcgcatcaatacctaccgaggcattgccagccgtgcttac
ctgtccatcacctcagaagatgcgatgcttagtgcctttcgactcagccgggatctacgc
aagttgtctaagaaggaacctgaatttaagcctcagtacctcagccttgaggagatatgt
caggagtttgctgtggagctgctgggaatgtgcaggaatcaaagtgaggtcaccaccatc
ctgaacagctgcagccatttagacgaggacagtgaggatgagttggaccagcaggccttt
gaggagggcatcccaaacctggctcgcttaagacttgctgtcaatcacaatcaaaaacag
tttgtagctcatccgatctgtcagcaggtgctctcctccatctggtgcgggagtctttca
ggctggaagggcagcagaacaacctggaagctccttgtctccttcatcatcttcttgacc
atgccacttctttgcctcatctactggatcgcaccaaagtcaaagttggggaagattttg
aagattccagtgattaaattcctccttcattctgcctcctatatgtggtttctgatcacg
cttttgggggaatccattgccatggagatttatcgggaaagcttcgcctctcggcatcag
aacatcctgcacaactccttccacatggtctgggtggttggtttcttctggttcgagtgt
aaggaggtctggatcgagggcttgaggtgttatttcctggactggtggaactgtctggac
atgatggttcttagcatgtatctggcttcattcgcattgagaatggttatcctgctgaag
ggcatcttcctgtgcgagtcaccagagagccaagatgaatgcatctacttcacagacacc
tcacgtgacagatggcatcaggaggatccgcagttcatctctgaggtgctgtttgcagtg
accagcatgctaagcttcacccgtttggcctacattttgccagcacaagagtctcttggt
accctgcagatctccattggaaagatgattgatgacatgatgagatttatgtttattttg
gtgatcattggaaccgctttcctgtgtggcatcaacaacacctatgtgccatatgtgatc
tctcctaatcttggaagattgaacgaaacctttcgtttcctcttctggaccatgtttggt
gtagctgaacagacttatgtggatatgccggagtttgctttggctgagtttgttggcagg
gtcctctatggcatctacactttgattattgtcattgtacttctcaacatgctcattgcc
atgatcaccaactcttttcagaaaattgaggatgacgctgatgtggagtggaaatttgcc
cgttcaaagctctatctgagctactttagagaaggactgactatgcctgttcccttcaac
atcatcccctctcctaaggcccttttctacctcttacgaggaactttcagaaagatctgc
tgctgttgtctcaactgtaactcacctccggattatcctcccatctcatctttggatgac
aagggcacaggcgagggacgaatttcatacaggcatcaggtgatacgtgctctggtacaa
cgatacattgaatctgccaggagagagtttgaggagacaaaacgcaaagatgttggaaac
agaatcacagagctgagcaaagtggttgtccgactccacacggaaatgaagcagatcaac
tccggcgcgctggattactccagcaacatctcagaaggttcatcagagggctcttctttc
ctggggaagtacattgttggagccaaaaacaacttcaaggacttcagcacagagagaaag
cctgctcctctgactcctgttcaccaagaagagccagaagatgaaccagaggaaaccggt
agagatggagaaaccacagacacgcaggagtctccagcctgtgacacagaggcagataaa
gagtcaactggagagccgaccattgagggaggaatagataatgttatagaggaacacaca
gtagacattgatgagacagatggaaatgatgaagacgttcagattattgttgaaaacaat
acagacggtgagcaaacagaggataaaaatgagacagtcatagaaatcgagaccaataca
gacactgagagcgagagcgagagagacagcggaggagcagatgagacactgatgagggac
gaagccgcagataacacagaaggattagaaacagatgaaggcttagaaacaacagatgta
aatcaatcggaggaaagtgaagcaaggacagagatgcaggagaacgaagacggtgaggga
aatgatggagggttggaggactcaaatgacggatctcagtgtgagggcagtgaggaaagt
gaggagatgagcattgatctgaacaagggaagcttagtgacttttttggcaaagagaata
gaggaaaaattggagatgaaagacatgaagttaatttttagtggaaaacaagcatcgtcg
tcgccaaccggcagtgatgtttcccacgacactggctttggatctcaatttgacctctcg
gcaaacagccccgaatga
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