Triplophysa dalaica: 130408486
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Entry
130408486 CDS
T09616
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
tdw
Triplophysa dalaica
Pathway
tdw03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130408486 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130408486 (ncam1a)
04517 IgSF CAM signaling
130408486 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130408486 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130408486 (ncam1a)
04090 CD molecules [BR:
tdw04090
]
130408486 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130408486 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
130408486 (ncam1a)
04091 Lectins [BR:
tdw04091
]
130408486 (ncam1a)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
130408486 (ncam1a)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
NCAM1/2
130408486 (ncam1a)
CD molecules [BR:
tdw04090
]
Proteins
130408486 (ncam1a)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
130408486 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
Others
130408486 (ncam1a)
Lectins [BR:
tdw04091
]
I-type lectins (Siglecs)
130408486 (ncam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_VEGFR-1-like_5th
fn3
VEGFR1-3_N_Ig-like
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
C2-set_2
Ig_5
C2-set_3
Pur_ac_phosph_N
C1-set
Motif
Other DBs
NCBI-GeneID:
130408486
NCBI-ProteinID:
XP_056588005
LinkDB
All DBs
Position
19:complement(9156471..9343617)
Genome browser
AA seq
1021 aa
AA seq
DB search
MLQIRDLIWTLLFCGYAAALQVEITPAQGEISVGESKFFLCEVVGDAKEIDWFAPNGEKL
LPGRPDISISNSDESSSTLTIYNANVDHAGMYKCVAKSGDKESQGTVIVKIFQKLTFQNV
PSPQEFNEGDDADIICDVISSPPPTVIWKYKFKKIQPETDVRFKVLSNNHLQIRGIKKTD
EGNYTCEGRIMARGEIDLRVITVIVNVLPSIRTRYTELNATADIGQAVTLACHADGYPEP
NVTWARGNIVLESNEKYSLNEDGSELTIKDVKKVDEGDYQCIARNKAGERSKEVSLSVFV
QPKITFLENLTASELEERITLTCEATGDPTPNIVWSFGRRIFTENEQASWTRPEKHKSLD
GNVVVRSDARVSSLTLKYVQFTDAGQYLCTARNSIGQDIQSMYLEVRYAPKIQGPAAVFT
WEGNPANITCEALAHPSASVSWFRDGQLLPSANTTYVKIYNTPTSSFLEVTPESQSDFGS
YNCTATNVIGTESKEFILIQADVPSAPSIDRVEPYSSTAVVEYDEPAANGGVPILKYKAE
WRIAGQDWTDREFDVGDGLNLINLVGLKPETVYEVKVSAINGKGEGESSPPETFKTQPVR
EPNPPKLEATPQSPGNEMKIYLIKQDDGGSPIKHYLVRYKPKLRQHWKPEFRLPNGSEYV
VLRDLEWNTDYDISVVAENLRGKSEPRILSFKTSPEPTAIPEISSGLGTGAIVGILIVVF
ILLLFGVDVTCYFLNKCGLLMCIAINFCGKSGPSAKGKDVEGGQAAFSKDESKEPIVEVR
TEEERTPNHEGGGPTEPNETTPLTDPEHAADTTATVVDLLPSVTTNSDPGTHSPASDSTT
LTSCTASAADPTPAPNPAPQSSTPKTSVTSPTSPQAASAAVAPLVDLSDTPPNQTPIPSD
STAPTSADSAKADSTKLPVGEPTQSTGPKNPPEPASGSPANPPQSKESVVKGGAQQNADN
DLAKDGFVKPSNAPPAPNQDDGKIAVDEKNKAVETEVKKNPTELKTVPNEAPQTNGNESK
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataagggatctcatttggacattgcttttctgtggttatgcagctgccttg
caagtggaaatcactccagcccaaggagaaatcagcgtgggagagtccaaattctttttg
tgcgaagttgttggagatgcgaaggaaatagactggtttgctcccaatggtgagaagctc
ctgccaggcagaccggacatcagcatctctaatagtgacgagtcctcgtctacactgacc
atctacaatgctaacgtcgaccatgctggcatgtacaagtgtgtggccaaaagcggggat
aaggaatctcagggcaccgtcattgtaaaaattttccagaaactcactttccaaaatgtt
ccgtcgccccaagagtttaatgagggggatgatgctgacatcatctgtgatgtcatcagc
tcgccacccccaactgttatctggaagtataaatttaagaaaatccagccggagactgat
gtccgtttcaaggtcttgagcaacaaccacctccagatccgtggcatcaagaaaacagat
gagggtaactacacctgcgagggtcgcatcatggcccggggtgaaatcgacctcagggtc
atcacagtcattgtcaacgttctgccaagtatcaggacccggtacaccgagctgaatgcc
accgcagacatcggacaagctgtgacgttggcctgccatgcagatggttacccggaaccc
aacgtcacgtgggcacgtggtaatatcgtgctggaatcaaatgagaagtacagtctgaat
gaagatggatctgagttgaccatcaaggacgtcaagaaggttgatgaaggagattaccaa
tgcatcgctaggaacaaggcaggggagaggagcaaggaagtcagcctcagtgtgtttgtg
caaccgaagatcacgttcctggaaaacctaacggcctcagagctagaggagcgtatcacg
ctcacctgcgaggccacaggcgaccccacacccaatatcgtctggagcttcgggcgccgc
atcttcaccgaaaacgagcaggcttcatggactcgacctgagaaacacaagagcctggat
gggaacgtggttgtacgcagtgatgctcgcgtgtcctcgctcactctgaaatacgtgcag
ttcacggatgctggccagtacctctgcaccgctcgcaactccattggtcaggacatccag
agcatgtacctggaagtgcgatatgcgccgaagatccagggccctgcggcagtgttcacc
tgggaggggaatccggctaacatcacctgtgaagctctggcgcacccgagcgcatctgtt
tcgtggttccgcgatggccagctactgcccagcgctaataccacatacgtcaagatctac
aacactccaacaagcagctttctagaggtcactcccgagtcccagagcgactttggcagt
tacaactgtacggccaccaatgtcatcggcacagaatcaaaggaatttattctgattcaa
gcagatgtgccttcggccccctctatcgatcgtgtggagccgtattctagcacagcggtg
gtggaatacgatgaacccgccgccaacggaggagttcccatcctcaagtacaaagccgag
tggaggatagcaggccaagactggactgacagagaatttgacgtcggggatggtctcaat
ttgatcaacctcgttgggctgaagcccgagactgtttatgaggtcaaggtgtccgccatc
aacggaaagggtgaaggagagagcagcccaccagagacctttaaaactcaacctgtccgg
gaacccaatcctcccaaactcgaggctacaccacaatccccaggcaacgagatgaagatc
tacctgatcaagcaggacgatgggggctctcccattaaacactatcttgtgcgctacaaa
cctaagcttcgccagcactggaagccagagttccgcctgcccaatggcagtgagtacgtt
gtcctgagggatctggaatggaacacggactatgacatctccgttgtggccgagaacctg
cgaggcaaatctgaacctagaatcctgtccttcaagacctcgccagagcccaccgccatt
ccagaaatcagctcaggtctgggcaccggagccatcgtgggcatcctcattgtagtcttc
atcctgcttctcttcggtgtggacgtcacgtgctactttctcaacaagtgcggccttctc
atgtgcatcgccattaacttctgtgggaagtccggtccctctgccaagggcaaagatgtc
gaggggggacaagctgccttctcaaaagacgagtctaaagaacccattgtggaagtaaga
accgaagaagagcggacgccaaaccacgagggaggaggtccaactgaacccaatgagacc
actcctctgactgaccctgagcatgcggctgataccacagcaacagtagtggacttgctt
ccctctgtaaccactaactctgatcccggcactcacagtcccgctagcgattccaccacc
cttacctcgtgcaccgcctccgccgctgaccccacaccagcccctaatcccgccccacaa
tccagcacccccaaaactagcgtcacctctcctacctccccacaagctgcgtccgcagca
gtggcccctctggtggacctgagcgatacgccccccaaccagacccccataccgtctgat
tcaaccgccccgacctccgcagattcggccaaagcagattctaccaagctccctgtgggc
gagccaactcagagcactgggccaaagaacccacctgagcctgcttccggcagccctgcc
aatcccccccaaagtaaggaatctgtggtgaagggaggagcccaacagaatgcagataat
gaccttgccaaggatgggtttgtcaagccctccaacgcaccgcccgcgcccaaccaggac
gatggtaaaatcgctgtagatgaaaaaaacaaagctgtggagacggaggtaaagaaaaac
cctacggagctgaagacggttcccaacgaagccccccaaacgaacggcaacgagagcaaa
gcgtga
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