KEGG   Triplophysa dalaica: 130408522
Entry
130408522         CDS       T09616                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
tdw  Triplophysa dalaica
Pathway
tdw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130408522 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdw04121]
    130408522 (cul5b)
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130408522 (cul5b)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     130408522 (cul5b)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130408522 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 130408522
NCBI-ProteinID: XP_056588064
LinkDB
Position
19:8641334..8648127
AA seq 795 aa
MATSNLLKNKGALQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIMEWRKFFTQCDILPKPFCKLEITLLG
NQGSNKKSNVEDSIVRKLMLDTWNESIFFNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNADDRLQIYRENFEKAYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLRE
EEKRAQRYLETRRECNSVQALMECCVNALVTSFRETILAECPGMIKRNETESEYGRSSVT
KGSASSELHLMFSLMDKVPSGIEPVLKDLEDHIMSAGLADMMASAESITNDSEKYVEQLL
TLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEMEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLGLPADS
VNIKILNAGAWSRNSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYDPVVGSPKDFTEGTLFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRFSNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaataaaggcgctctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagtcagttactaagcagcagtgg
tttgatttgttctcggatgtccatgccgtctgtttgtgggacgataaaggccctgcaaag
attcatcaggcattgaaagaagacatattagatttcatcaagcaagctcaggcacgagta
ctcagtcaccaagatgacacagccttgcttaaagcctacatcatggagtggaggaaattc
tttacacaatgtgatattctgcctaaacccttctgcaagctggagatcacactgttgggc
aaccaagggagcaataagaagtccaacgttgaagatagcattgttagaaagcttatgctg
gacacatggaacgagtctatattctttaatataaagaaccggctccaggacagtgctatg
aaactggtccatgcggagagattaggtgaagctttcgactcgcagcttgtcatcggtgtg
cgggaatcatatgtgaacctgtgctccaatgcagacgatagactgcagatctacagagag
aattttgagaaagcctatctagattccacggagaggttctataagacacaggcaccttcc
tacctgcaacagaatggcgttcagaactatatgaaatatgcagatggcaagttaagagaa
gaagagaaacgtgcacagcgatatttggaaacaagacgtgaatgtaactccgtccaggca
ctaatggagtgttgtgtgaatgcactggtcacatcgttcagagagacaatcctagccgaa
tgtccgggcatgatcaagcggaatgagacagagagtgagtacggcaggagctctgtcacc
aaaggctctgcgagttcagaactgcacctcatgttctcgctcatggacaaagtgcccagc
ggcattgagcctgtgttgaaagatcttgaagatcacatcatgagcgcaggtctggctgat
atgatggcctcagcagaatccattactaatgactctgaaaagtacgtagagcagctcctc
acattatttaaccgctttagtaaattggttaaagaagcatttcaagacgacccacgtttt
ctgactgccagagataaagcatataaagcagtggtaaatgatgccacaatattcaaacta
gagctcccattaaaacagaaaggggtgggtcttaaaacacaaccagagtccaaatgtcca
gagctgctggccaactactgtgatatgctccttagaaagactccattaagtaaaaaactt
acctcagaggaaatagaagccaagctaaaggaagtgctcttggttctgaagtacgttcag
aacaaagacgtctttatgaggtaccacaaagcccacctgacccgcagactcattcttgac
atttcagcagacagtgagatggaagagaacatggtggagtggctcagggaggtcggaatg
ccggccgattacgtcaataaactggccagaatgttccaggacataaaagtatctgaagat
ttgaatcagtccttcaaagaaatgcacaaacacaacaaacttggactaccagccgactcg
gtcaatataaagatcttaaatgctggagcgtggtcccggaattcagaaaaagtttttgta
tctctgcctaccgaactagaagatcttattcctgaagtcgaggagttttacaagaagaac
cacagcggcaggaaattacattggcaccatctgatgtccaatggcattatcacattcaag
aatgaagttggacagtatgatttagaggtcacgacattccagttagctgtgctgtttgcc
tggaatcaaagacccagagagaggatcagtttcgaaaacctgaaactcgccaccgaactt
ccagacgcagagctgcggcggaccctttggtcccttgtagcttttcccaaacttaaacgc
caggtgctgtcatatgatcctgtggtgggctctccgaaagacttcacagaaggcactttg
ttttacatcaaccaagagttttcattaataaaaaactcaaaagtccagaaaagaggaaag
atcaatttgattggtcgattacaactcaccacagagagaatgcgtgaagaagaaaatgag
ggcatagtgcaactgaggatattacgcacacaggaagctatcattcagatcatgaagatg
cggaagaggtttagcaacgcccagctgcagacagagttggtggagatcctaaaaaacatg
tttttaccccagaagaagatgatcaaagagcagattgaatggttaatagaacacaagtac
atcaaacgggacgagaccgacattaacacctttatctacatggcatag

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