Triplophysa dalaica: 130408813
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Entry
130408813 CDS
T09616
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101
KO
K10654
tripartite motif-containing protein 55
Organism
tdw
Triplophysa dalaica
Pathway
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130408813 (trim101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130408813 (trim101)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130408813 (trim101)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
Sina_RING
Trypan_PARP
ECH_2
Motif
Other DBs
NCBI-GeneID:
130408813
NCBI-ProteinID:
XP_056588228
LinkDB
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Position
20:complement(9822684..9829726)
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AA seq
427 aa
AA seq
DB search
MSLPLDMCSDRRDSLGTLKKQLICPICLEVFTKPVVMLPCLHNLCRKCANELYQPSLLKV
GVGRFCCPSCRHEVVLDRHGVYGLQRNLLVENIIDVYKQESASSRPPPKPLAQPTCEEHD
DEKLNIYCITCQVPTCSLCKVFGAHKNCQVTPLSDVYGQQKTELNDGVAILVSTNDRVQA
FINELEEICRNIEENSRIQKQILCEKFDSMRAILDERRKIMTQQISYEEKEKTGWTQSLV
QTYTSHLDTNSKLVQAALKAIEEPEMASFVQPSKDLIEKVCKASTCFTLETLEPGYENMD
HYKVDFREEERVLHQLDFIKFEEEVEETPDEPEPEPECEPAPVPTPEPDPELDQDLKLED
SDMRNHIQETTENTWEQADICSDVKKEPVCERHGFSTQQAVTLIFYFLCFLVILQRVWGS
IQCLICL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccgctggatatgtgctctgatcgcagggactcgttggggactcttaagaaa
caactcatttgtcccatctgtctggaggtgttcacaaaaccagtggtcatgctgccctgc
ctccataacctttgtcgcaaatgtgccaacgagttgtaccagccgtctctcttaaaggtt
ggtgttggacgcttctgctgcccttcctgtcgtcatgaggtcgtcctggatcgccacgga
gtttatggactgcagcgcaatttacttgttgagaacatcattgatgtttacaagcaggag
tctgcaagctccaggcctccaccgaagcctcttgcgcagccgacttgtgaggaacatgac
gatgagaagcttaatatttattgcatcacgtgtcaggtgcccacctgctctctctgcaag
gtgtttggcgcacacaagaactgccaagtcactcctctatctgatgtctatgggcaacag
aaaactgaactcaatgatggagtagccatcttggtgtccacaaatgaccgtgtccaagct
tttattaatgagctggaggaaatctgcaggaacatagaggagaacagcaggatccaaaag
cagattctatgtgagaagtttgacagcatgagggctattctggacgaacgtcgtaagatc
atgactcaacaaataagctatgaggagaaggaaaagactggctggacccaatctttagtg
caaacatacactagccatctagacacaaactcaaaactggtacaggcagcacttaaagct
attgaagagccagagatggcatcttttgtgcagccctcaaaagatctaattgagaaggtt
tgtaaagcctccacatgcttcactctggagaccctggaacctggatatgaaaatatggac
cactacaaggtggactttagagaagaggagcgagtgctccatcagctagatttcattaag
tttgaagaggaagtggaggagacgcccgatgaaccagaaccagaacccgagtgtgaacct
gcaccagtgccaaccccagaacctgatcctgaactagaccaggatctaaaattagaggac
tcagacatgagaaaccatatccaagaaacaactgagaatacatgggaacaagcagacatc
tgttcagatgtcaaaaaggagcctgtgtgtgagaggcatgggtttagcacccagcaggct
gtcaccctcatcttttacttcctgtgctttctggtcatcctacagcgagtgtggggaagc
attcagtgtctcatttgtttatag
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