KEGG   Triplophysa dalaica: 130409075
Entry
130409075         CDS       T09616                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
tdw  Triplophysa dalaica
Pathway
tdw04510  Focal adhesion
tdw04512  ECM-receptor interaction
tdw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130409075 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130409075 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130409075 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tdw00535]
    130409075 (col9a3)
Proteoglycans [BR:tdw00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   130409075 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 130409075
NCBI-ProteinID: XP_056588679
LinkDB
Position
20:complement(14991940..15012676)
AA seq 678 aa
MAVLSALQLLFLCQLLTSSFAQRPGPRGSPGLPGPPGPPGKDGIDGKDGPAGLAGKPGPK
GKAGKPGAAGSPGIPGLPGVDGLTGPDGPAGKDGPPGAIGERGPLGPPGPPGRGRPGAAG
LSGADGLPGGPGPQGPPGPEGLPGLSGQPGKDGPPGLPGTLPEGSGDLLCPSICPPGPPG
PPGMPGFKGHTGHKGDKGEVGKDGELGDQGPPGPPGIPGTVGLQGPRGLRGVPGPVGPVG
DRGLPGFRGKPGIAGVIGKTGDSGEKGPQGFKGPKGEIGKTGPKGVSGGVGPKGEPGMPG
RDGKDGTQGLDGEKGDAGRPGVSGEKGPNGLPGLQGKAGSKGAMGEVGKPGEMGKNGPSG
EPGIPGEIGIPGERGEAGPRGVAGGIGLLGNAGPQGVKGFQGVNGALGDPGLPGPTGIRG
GFGERGPLGARGPKGDMGVAGSDGLPGENGEPGPYGPVGQKGESGKRGELGPKGVAGPQG
ETGPRGAPGRTGTMGLQGEQGFPGVAGKTGVPGKLSSEQHIRELCGSMIDDQIAQLAANL
RRPLAPGAVGRPGPSGPQGRPGEVGSIGHPGARGPPGYRGLPGDLGDSGPRGDFGEPGDK
GPVGKAIEGPAGDQGEQGLPGVNGVVKDGRDGAPGDPGEQGEAGRTGRTGHQGSPGICDT
SACQGAVVHGKSSNPKNH
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggccgtgttgtcagctcttcagcttctatttctgtgccagctgttaacatcatctttt
gcccagaggccaggtccgcgtggttcacctggactgccagggccacctggacccccaggg
aaagatggcattgatggtaaggatggtcctgctggacttgctggaaagcctgggccaaag
ggaaaagctggtaaaccaggggccgctggaagcccaggaatacccggcctccctggagtg
gatggtttgacaggtcctgatggtcccgctggaaaggatggaccaccaggagcaataggc
gaacggggacctctcggaccaccaggaccccctggcagagggaggccaggagctgcaggt
ctttctggagctgatggtcttccaggtggaccaggacctcagggtccgcctggacctgag
ggtcttccaggactttctggtcagccaggcaaagacggaccacctgggcttccaggaact
cttcctgaaggtagtggagacctgctgtgtccatccatctgtcctccaggtcctcccgga
cctcctggaatgcccggatttaagggtcatacaggtcataaaggagataagggagaggtg
ggaaaagatggagaactgggcgatcagggtccgcctggtcctcccggaatcccgggtaca
gtgggtttacagggtccccgtggtctgaggggtgtgccgggtccagtagggccagtgggt
gatagaggattgcctggcttcagaggaaaacccggcattgctggtgtcattggaaaaacg
ggtgactctggtgaaaagggacctcaaggttttaaagggcccaaaggagagattggaaaa
acgggccctaagggagtttcgggaggtgtaggacccaaaggcgaacctggcatgccaggt
cgagatgggaaggacgggactcaaggcctggatggtgaaaagggcgatgctggacgacct
ggggtatctggtgagaaaggacctaatggattgcctggtttgcaaggaaaagctggtagc
aaaggagccatgggagaagttggaaaaccgggggagatgggaaaaaacggaccatctgga
gagccaggtatccctggcgagattggcatccctggagagagaggagaggctggacccaga
ggtgtagctggtggcattggactacttggaaacgctggtccacaaggtgtaaaaggattc
cagggtgttaatggtgctcttggggatccaggtttacccggcccgactggaatcagaggc
gggtttggtgagaggggtcctcttggggctagaggtcctaaaggagacatgggtgtggcc
ggaagtgacggtttaccaggagagaatggagagcctggtccctatggccctgtcgggcag
aaaggagagtctggtaagcgtggtgaactcggacctaaaggagttgcaggaccacaggga
gaaacaggacctagaggtgcacctggaagaacgggaacaatgggattacaaggagagcaa
ggttttcctggagttgctgggaagactggtgttcctggcaaactgtccagtgagcagcac
atcagggaactgtgtggatcaatgattgatgatcaaattgctcagctggccgcaaaccta
agaagacctctggcccctggtgctgtgggacgccccggaccttctggacctcaagggagg
ccaggagaagttggatccattggtcaccctggagcacgtggtccaccaggttatagagga
ctgccaggagatcttggcgattctggtccaagaggggattttggtgagccgggtgataag
ggtccagttggtaaagccatcgaagggcctgctggagaccagggtgaacaaggtttgcct
ggtgtgaatggcgtcgttaaagacgggcgtgatggagcacctggagatccaggagagcaa
ggagaagccggaagaacaggacgcacaggacaccaaggatcacctggaatctgtgacacg
tcagcatgccagggtgctgtggttcatgggaagtcttccaatcccaagaaccactaa

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