Triplophysa dalaica: 130409195
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Entry
130409195 CDS
T09616
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130409195 (rin1b)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130409195 (rin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Motif
Other DBs
NCBI-GeneID:
130409195
NCBI-ProteinID:
XP_056588995
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Position
1:complement(29060919..29126515)
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AA seq
730 aa
AA seq
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MDVSLQRSLSVLDRLLLTHSIWLQLSVNPTSAHQILQREIVGTFLVCKCSASHRKVLCVR
VGESGVCVSQYPIREEDSTFSLECSALSFPDLCRLVAFYTVSRDVLPLPLELPEAIVQAT
THTQLENISHLGLEFWSSQTSPGLPNGPPPPSKPHRTPRVINPCFINPLFLQPPQPSRAA
SHKRHRFKRSLRVRVSNETSLSLSGGESDLTQGERPKENANQDGQRRTGGISMLRRTQAL
SPTSEEEDEQMMGQIPSSNLMPQRDDDQLNKAPEDGGVCLALERTHAPSLAELDSNSSFS
SLEEEDNLLDSAEQWPPAARGTRFPSANPTSTLRRMTAAFVCVFAPERRVARLVDELSRD
RRSTFGSLVQDFLEKQRQEMKASSSAVKILEGLRRFLSQAKSLLLEAGEIEPPIETLVPE
NEKDLALEKALFGCVLKPLKVQLHQTLVSLHTLDGSLQRITDRMLACQEGALEHLGVRVG
VLDIRGIERAKTKLTLMQRSHSPIDKVLLLLQVCKSVYKAMGTQPDQPVGSEDFLPALAY
VLVQSNIPQLLLETEYMMELLDASWLTGEGGYYLTTVYASLYLIQSKPGTVPTCSLTSET
QESLREWSRRRGQEAKTQKDNQQKQRFVRVLFQDDSRSAMRTLLWKAGENVDALAQICAG
LFGVKEPQRYCLFWRNEGEMRTLPANFQPNELGMHEGVSLSYLRSDHDFSKMRRLTRGGA
VDLGESVYEE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtctctccaaaggagtttgagtgttttggatcgtcttctccttacacactcc
atatggttgcagctgtccgtcaaccctacctctgctcaccaaatcctacagagagagatt
gtggggacatttctggtgtgtaagtgtagcgcctcccacagaaaggttctttgtgtgcga
gtaggggagtctggtgtgtgtgtttcacagtatcccatccgtgaagaagactccacattt
tctttagaatgttcagccctgagcttcccggatctctgcagacttgtggccttttacaca
gtcagcagagatgtgttgcctttacctcttgagctcccagaagcaattgtacaggcaaca
acacatacacagctggaaaacatttcacatttgggtttggagttttggagttctcagaca
tctcctggccttccaaatggtccccctccaccttcaaaaccccaccgaacgcccagggtc
ataaacccctgtttcattaatcccctgttccttcaaccaccccagcccagcagagctgcc
tcacataaacgtcaccgcttcaaacgtagcctcagggtccgtgtgtccaatgaaacctct
cttagtctgtcaggtggagaatcggatttaacccagggggagcgacctaaagagaatgcc
aaccaggatggccagaggaggacaggagggataagcatgctcaggaggactcaagctctg
tctcccacctcagaagaggaggacgaacagatgatgggccaaataccgtcgagtaactta
atgccacagcgtgacgatgatcaactcaacaaagctcctgaagatggtggggtttgcctc
gctttggaaagaactcatgctccttctcttgctgaactggacagcaatagctcttttagt
agtctggaagaagaggacaacctcttggactctgccgaacaatggccacctgccgcacga
ggtactcgattcccctctgcgaaccccacttccaccttgcgccgcatgactgccgctttc
gtctgtgtgtttgctcctgaacgacgagttgcccgattggtagatgaactctcccgcgac
agacgctctacatttgggtcattggtgcaagattttctagagaaacagaggcaggagatg
aaggcctctagttctgctgtcaagattcttgaagggttgaggagatttctgtcccaagcc
aagagcctccttctggaagcaggagaaattgagcctccgattgagacgttggtgcctgag
aatgagaaagatcttgctctggagaaagctctgtttggctgtgtgttaaagccgttgaag
gttcagctgcaccagacgctcgtctctttgcatactctggacggctccttacagaggatc
acagacaggatgttggcctgccaggagggggcgctagagcatttgggtgtacgagtgggg
gtcctggatattcgaggcatagaacgagcaaagactaagctcacacttatgcaacgaagc
cattcgcctattgataaggtgttgcttttgctgcaggtgtgcaagagcgtgtacaaagcc
atggggacccaaccggatcagccagtggggtcagaggacttccttccggcattggcctat
gtcctagtgcagtctaacatcccacaactactgctggagacagagtacatgatggagttg
cttgatgcatcatggctgacaggagaaggtggatattatttgacaactgtgtatgccagc
ctgtacctgatccagagcaagcctgggaccgtgcccacctgtagtctaaccagtgagact
caagaaagcttgcgcgagtggagcaggaggcgtggccaagaggccaaaacccagaaagac
aatcagcagaaacagaggttcgtacgtgtgttatttcaggacgacagtcgtagtgcaatg
cgaacacttctctggaaggcgggggaaaatgtagacgctttagcccaaatttgcgctggg
ctttttggtgtgaaagagccccagcgctactgtctgttctggaggaatgaaggggaaatg
cgcacactacctgccaattttcagcctaatgaactgggcatgcatgagggggtttctctg
tcctatctccgctccgatcatgacttcagcaagatgcgcagactgaccagagggggtgct
gtggatctgggggagtctgtgtatgaggagtaa
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