Triplophysa dalaica: 130409205
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Entry
130409205 CDS
T09616
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
tdw
Triplophysa dalaica
Pathway
tdw03266
Virion - Herpesvirus
tdw04145
Phagocytosis
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04517
IgSF CAM signaling
tdw04518
Integrin signaling
tdw04810
Regulation of actin cytoskeleton
tdw04820
Cytoskeleton in muscle cells
tdw05100
Bacterial invasion of epithelial cells
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
130409205 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130409205 (itga5)
04517 IgSF CAM signaling
130409205 (itga5)
04518 Integrin signaling
130409205 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130409205 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130409205 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130409205 (itga5)
04810 Regulation of actin cytoskeleton
130409205 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130409205 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130409205 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130409205 (itga5)
04515 Cell adhesion molecules [BR:
tdw04515
]
130409205 (itga5)
04090 CD molecules [BR:
tdw04090
]
130409205 (itga5)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130409205 (itga5)
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin alpha subunits
130409205 (itga5)
CD molecules [BR:
tdw04090
]
Proteins
130409205 (itga5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Membra_charge
Motif
Other DBs
NCBI-GeneID:
130409205
NCBI-ProteinID:
XP_056588975
LinkDB
All DBs
Position
20:1589915..1645419
Genome browser
AA seq
1056 aa
AA seq
DB search
MGSKRHRSKTTATLRFTSCSPMGLSLLLLLPLCVAFNLDVDNPAVYKGPSGSHFGYSVDF
YMFESSVSIIIGAPKANTSQPNIREGGSVFYCPWSLNQSKCSSIEFDPYGDLNLTVNFTP
HQGEFKSHQWFGATVRVHEDSVLACAPLYSWRGMENTPEAYATGSCYLSVQNFTKFVEYA
PCRTETGESESQGYCQGGFSADFTREGKVVLGGPGSYFWQGQVITAVKEEIVKAYYPGYF
LTSVKGLSQTKPIKEITFDDTYMGYSVAVGNFSGGDKEDIVTGVPRGLKLHGQVSILNGS
LDMLKNFTGEQMGSYFGHAVASADINNDGLTDLLVGAPMFMVRDSDGRLEELGRVYVYLQ
NGPLDLTPQLPHLTGTYMSGRFGSSIAPLGDLNQDGYNDVAIGCPFGGENKQGLVFIYNG
FAGGLREKPSQVIAGQWASSESSNFPAIFGYALRGGEDLDYNGYPDLIVGAFGADAAVLY
RSRPIVNTSATLSVYPTIINPEEKLCIFRHGTETKHVSCVNLSFCLSANGKHLPNHLEFN
VEVQLDHLKQQQKGAVRRALFLDTQLPSLQRTLTVPNGARVCSDTKIYLRDEKEFRDKLS
PIFVSLNFSMNPQSAADMHGLRPILNYQTAQLIEQKAQILLDCGEDNICVPDLKLSVHGD
RKEVYMGDDNSLTLTFNAKNDGGGAYEAELYVVLPPEADYIGIGRNNESLTQLTCSYETE
NQTRYLSCDLGNPMKSGTSLWAGLRFTLPRLKDTHDFVQFDLQIRCKNENNSQSEVVPYK
LEVVVRSDVILLGVSRPDKVIFPPPNWKLAKNVIVEQDVGPSVQHTYELVNNGPSRISHT
VLQLKCPMRLQSNRFIYPLEVTTEGPVNCTTHNIVNPLKLKLQQSSTEQPPLRDGAHGHH
IEKRETHKGELSQMANLSCSSVDCWTLTCDVGLLERGTSAILHVHSRIWAETFMENPYKT
FVLECLASYKVEKMPYAILPKVTPSGAKKMVTPVLWNKIGSTYAVPLWIIILAILAGLLL
LALLIYVLYKLGFFKRTQYGTAMEKAQLKPQATSEA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaaaaggcaccgttcaaagactacggcgactttgcgcttcacgagctgctct
ccaatgggactttcgctgttgcttcttctacctttgtgtgttgccttcaacttggatgtg
gacaacccagcggtgtataaaggacccagcggcagtcatttcggctactcggtggacttt
tacatgttcgagtcgagtgtgagtattattatcggagcgcccaaagccaacaccagccag
cccaacatcagagagggaggatctgtcttctactgtccatggagtctcaaccaatcaaaa
tgcagcagcatcgaattcgatccgtacggtgatctaaacctgacggtcaacttcacaccg
caccagggagagttcaaatcccaccagtggttcggagcaacagtacgagtccatgaagat
agtgtcctggcttgtgctcctctgtactcatggaggggcatggagaacacgcctgaggcc
tatgctaccggatcatgttatctgtcagtccaaaatttcaccaagtttgtggaatatgct
ccatgtcgcacagaaaccggtgaaagtgaaagccaaggttattgtcagggcggattcagt
gctgattttacacgggaaggaaaggttgtgcttggaggacccggcagttacttctggcag
ggtcaagtgatcacagcagtcaaagaagaaatagtcaaggcttattacccaggatacttc
ctcacatcggtgaaagggctcagtcagaccaaaccgataaaagaaatcacctttgacgac
acctacatgggttactctgtggctgtgggcaacttcagtggaggtgataaagaagacatt
gtgactggggttcccaggggacttaaactgcacggacaggtttccattctgaatggctct
ctggacatgttgaagaactttactggcgagcagatgggatcctacttcggtcatgctgtg
gcatctgctgatatcaacaatgatggtttgacggatctgcttgttggagcgcccatgttc
atggttcgagattctgatgggcgtttggaggagttgggtcgtgtttacgtgtacctgcag
aacggacctctggacctcacgcctcagctacctcacctcaccggcacatatatgtccggc
cggtttggcagctccatcgctcctctcggagacctcaaccaagatggctacaacgatgtg
gccatcggttgtccgttcggtggggagaacaaacaaggattggtcttcatctataatgga
ttcgctggaggtctccgagaaaagccgtctcaggtgatcgctggccaatgggcttcatcc
gaatcgtcaaatttccctgccattttcggatacgcccttcgtggaggtgaagatttggat
tacaacgggtacccggatctcattgtgggtgcgtttggtgcagacgccgctgttctgtac
agatctcgtcctattgtaaatacaagtgcaaccctgagtgtctatccaactattattaat
cctgaagagaaactttgcatctttaggcacgggactgagactaagcacgtttcctgtgta
aacctgagcttctgtctctcagccaatgggaagcacctaccaaatcatctcgagttcaat
gttgaagttcagctggatcatctgaagcagcagcagaagggagccgtacggagagctctg
tttttggacacgcagcttccaagtctacagaggacgttaaccgtgccgaatggagccaga
gtctgtagtgacaccaagatctacctgcgggatgagaaagaattcagggacaagctgtct
cccatcttcgtctctctcaacttcagcatgaatccgcaatccgctgcagacatgcacgga
ctgcggcccatcctcaactaccagacggcacagctcatcgaacagaaagcccagatttta
ctggactgtggagaggacaacatctgcgtccctgacctgaaactctccgtgcacggggac
aggaaggaagtctacatgggtgacgacaactctctgactctgactttcaacgcaaagaac
gacggaggtggagcgtatgaagcagagctgtatgtggtcctgccaccagaggccgactac
atcggaattgggcgtaataatgagagtttgacccaactgacctgcagttacgagacggaa
aatcaaacccgttatctcagctgtgacctgggcaaccccatgaaatctggcaccagttta
tgggccggactgcgcttcacgttgcctcgtctgaaggacacacacgactttgtgcagttt
gacctgcagatccgttgtaagaatgaaaataactcccagagtgaagtcgtcccctacaag
ttggaggtggtggtccggtctgatgttattctactgggcgtctcccgaccagacaaggtc
atcttcccccctccaaactggaagcttgccaagaatgtgattgtggaacaggatgtcgga
ccctccgtccagcacacttacgagctggtgaacaatgggccgagtcgcatcagtcacaca
gtcctgcagctcaagtgccccatgaggcttcaaagtaacaggttcatttaccctctggag
gtcacgactgagggccctgttaactgcaccacccacaacatagtcaaccccttgaagctg
aagctgcagcagtcctcaaccgagcagcctcccttacgagacggggcgcacgggcatcac
atcgagaagagggaaacgcacaagggcgagctgtctcaaatggccaatctgtcttgctcc
agtgtggattgttggacgttaacgtgtgacgttggcctgttggagagagggacgagtgcc
atactgcacgttcactcgcggatctgggccgaaacattcatggagaatccatacaagacc
tttgttttagagtgtcttgcaagttacaaagtagaaaagatgccctatgctattttgccc
aaggtgactcctagcggtgccaaaaagatggtcactcctgtgctctggaacaaaataggc
agtacatatgctgtacctctgtggatcatcattctggctattcttgccggccttttactg
ctcgccctgctcatttatgtcctctacaagctcggcttcttcaagaggactcagtacggc
acagctatggaaaaagcccagctcaaacctcaggccacctctgaggcctaa
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