Triplophysa dalaica: 130409209
Help
Entry
130409209 CDS
T09616
Symbol
xpo1a
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03008
Ribosome biogenesis in eukaryotes
tdw03013
Nucleocytoplasmic transport
tdw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130409209 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
130409209 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130409209 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130409209 (xpo1a)
03009 Ribosome biogenesis [BR:
tdw03009
]
130409209 (xpo1a)
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130409209 (xpo1a)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130409209 (xpo1a)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130409209 (xpo1a)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130409209 (xpo1a)
Pre-60S particles
130409209 (xpo1a)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130409209 (xpo1a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130409209 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
130409209
NCBI-ProteinID:
XP_056588984
LinkDB
All DBs
Position
2:complement(4210254..4218654)
Genome browser
AA seq
1110 aa
AA seq
DB search
MYLHAQFFTCKSVMFNIRKKQLKNANSCTVSSASKFSISMPADMTMLADHTARQLLDFSQ
KLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAWTRVDTILEFSQNMKTKYYALQ
ILETVIKTRWKVLPRNQCDGIKKYVVGLIIKTSSDPNSVEKEGVYIAKLNMILVQILKQE
WPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFDFSSGQMTQVKAKHLKDSMCSE
FSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLVYKFLNVPMFR
NVTLKCLTEIAGVSVSQYEEQFVNLFTLTMTQLKQMLPLNTNIRLAYANGKDDEQNFIQN
LSLFLCTFLKEHGQLIEKRLNLRESLMESLHYMLLVSEVEETEIFKICLEYWNHLAAELY
RESPFSTSTSPLLSTSQHFDVPPRRHLYLPVLSKVRLLMVSRMAKPEEVLVVENDQGEVV
REFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVNGTEWSWRNLNMLCWAI
GSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKF
LKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTI
ICDLQPQQVHTFYEAVGYMIGAQTDQTVQEQLIEKYMLLPNQVWDSIIQQATKNVDILKD
AETVRQLGSILKTNVRACKAVGHPFVLQLGRIYLDMLNVYKCLSENISSAVQTNGEMVTK
QPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVLIDYQRNVPAAREPEVL
STMATIVNKLGSHITAEIPKIFDAVFECTLDMINKNFEEYPEHRTHFFYLLQAVTSQCFP
AYLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNITQEETAAQSFYQTYFCD
ILQHILSVVTDTSHTAGLTMHASILAYMFNLVEEGKISVALNASTNVNNQVYVQEYVANL
LKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDSADLFLEERETA
LRQAQEEKHKLQMSVPGILNPHELPEEMCE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacatgctcagttttttacgtgtaaaagtgttatgtttaatatcaggaaaaag
caattgaaaaatgcaaacagttgtacagtgagttcagcaagcaagttctcaatctctatg
ccggcagacatgaccatgttggcagatcacacagctcgacagctgctagatttcagtcag
aagttggacatcaacctgctggacaatgtcgtcaactccatgtactatgatgtcggatct
cagcaacgactggcacaagaagtcctcaccaatcttaaggatcacccagatgcctggacc
agagttgacaccatattggagttctcccagaacatgaaaacaaagtattacgctcttcag
atacttgagacagtgatcaaaacacgctggaaagttcttccacggaatcaatgtgacgga
attaagaagtatgttgtgggactgattattaaaacgtcctctgatcctaacagtgtagag
aaggaaggagtttacatagcaaagctgaacatgatcctggtacagatcctgaagcaggaa
tggccgaagcactggcccacgttcatcagtgacattgtgggagcgagtcgcaccagtgag
agtctgtgtcagaacaacatgatcatcctgaaactcctcagtgaggaggtgtttgacttt
tccagtggacagatgactcaggtcaaagccaaacacctgaaggacagcatgtgcagtgaa
ttttcccaaatatttcagctctgtcagtttgttatggagaattcccagaatgcccctctt
gtccatgccacactggagactcttcttcgtttcctaaactggattccgttaggctacata
tttgagaccaaactcatcagcaccctagtgtacaagtttttgaatgtcccgatgttcagg
aacgtgactttgaaatgtctgactgagatcgcaggggtcagtgtcagtcagtacgaggag
cagtttgtcaacctgtttactctcaccatgacgcaactcaaacagatgctgccactaaac
acaaatatccgtctggcgtacgcgaatggaaaagacgatgagcaaaacttcatccagaac
ctcagtctgtttctctgcaccttcctcaaagagcacggacaactgatagagaagaggttg
aacctcagagagtcgctcatggagtctctacattacatgttactggtgtcagaggtggaa
gagactgaaatcttcaagatctgtctggagtattggaaccacctggctgcggagctctac
agagagagccccttctccacatcaacctctccactcctctccactagtcaacacttcgat
gtgccgccccgcagacacctgtacctgcccgtgctctccaaggtacgtctgcttatggta
agtcgcatggccaaacccgaagaggttttggtggttgagaatgaccagggtgaggtggtg
agagagttcatgaaagacacagactccatcaacctctacaagaacatgagagagactctg
gtttatttgactcatctggactatgccgatacggagaggatcatgacagagaaacttcat
aatcaggtgaacggtaccgagtggtcctggaggaacctgaacatgctgtgctgggccatc
ggctccatcagtggtgccatgcatgaggaagatgagaagagattccttgtcacagtcatt
aaggatctgctgggtctgtgcgaacagaaaagaggaaaagacaacaaggcaatcattgcc
tcaaacatcatgtacatcgttggccagtacccacgattcctcagggctcactggaagttc
ctcaaaactgttgttaacaagctctttgaattcatgcacgagacccatgatggtgtgcag
gacatggcatgtgacacgttcatcaagatcgcccagaagtgcaggaggcatttcgtgcaa
gtgcaggtgggcgaagtgatgcccttcatcgatgagatcctcaacaacatcaacaccatc
atctgcgacctgcagccgcagcaggtacacacgttctacgaggccgtgggctatatgatc
ggagcgcagacagaccagaccgtgcaggagcagctgattgagaaatacatgctcctcccc
aaccaggtgtgggacagcatcattcagcaggccaccaagaacgtggacattcttaaggac
gcagagaccgtgcgccagctgggcagcatccttaagaccaacgtgagagcgtgtaaggct
gtgggtcacccttttgtcctgcagctgggccgcatttatctggacatgctcaacgtctac
aagtgcctgagtgagaacatatcatctgctgtccagacaaatggtgaaatggtgactaag
cagcccctcatcagaagtatgcgaactgtgaagagagaaactctgaaacttatctcagga
tgggtcagccgttccaatgatcctcagatggttggagagaactttgttcctcctttgctg
gaggcagttctcattgactaccaaaggaacgttccggctgcccgggaaccagaggtgctc
agcaccatggcaaccatcgtcaacaagctcggaagtcatataacagcagagattcccaag
atcttcgatgctgtgtttgagtgcacccttgacatgatcaacaagaactttgaggagtac
cctgagcacaggacacatttcttctacctgctccaggccgtcacttcccagtgcttccct
gcgtacctgtctatccctcctgcacagttcaaactggtgctggattctattatctgggcc
ttcaaacacaccatgagaaatgttgccgacacagggcttcagattctgttcactctactg
cagaacatcacacaggaggaaacggccgctcaaagcttctatcagacgtacttctgtgac
atcctgcagcacatcttgtcggttgtcacggatacatctcacacggctggtttgacgatg
catgcctccatcctcgcctacatgttcaacttggtggaggagggtaaaataagtgtagcg
ctgaacgctagcaccaacgtcaacaaccaagtgtatgtgcaggagtatgtggccaacctt
ctcaagacggccttcccacatctacaagacgcccaggtgaaggtgtttgtcacgggtctc
ttcagcttaaatcaggacattcctgcatttaaagaacatctcagggacttcctggttcag
atcaaggagtttgcgggtgaggactccgcagatctctttctggaggagagggagacggct
ttgcgtcaagcccaggaggagaagcacaaacttcaaatgtccgttcctggaatcctcaac
ccccacgagcttccggaggagatgtgcgaatga
DBGET
integrated database retrieval system