Triplophysa dalaica: 130409218
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Entry
130409218 CDS
T09616
Symbol
cntn3a.1
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130409218 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
130409218 (cntn3a.1)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
Contactins
130409218 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
Others
130409218 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_6
Pur_ac_phosph_N
Tissue_fac
fn3_2
Herpes_gE_N
NDNF
Nuc_sug_transp
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
130409218
NCBI-ProteinID:
XP_056589008
LinkDB
All DBs
Position
20:11156782..11211000
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AA seq
1027 aa
AA seq
DB search
MGLSWKLLVLQLFMWRLSEGSGPLRPVFTKQPGSVVFPLHFNEPSREVTFNCEAQGHPPP
SYRWKMNDSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTIVSREASLHI
AYLEEFKTQRRSPVNVREGQGVVLLCGPPPYMGELTFSWIFNEYPSFVKQDTRRFVSQKT
GNLYIAKVEPSEVGNYTCVVTNTVTQTTVQGPPTPLVLRSDGIMGEYEPKIEVQLPEILA
VAKGLTVKLECFALGNPVPVISWRRTDENPFPRKVDANKSSGVLEIPYFQQEDAGQYECV
AENSRGKNAVKGRLSFFAPPHLLEKPQDVKKAIDESLLWECKASAKPKPSYRWLKNGEPL
ESFEDRIQVENGALSISSLTLSDTGMYQCIAENRHGRVFVNAELRVIAVAPDFSDSLLKA
QTLARQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLY
TCVARNQFGVASSAGTLVVKEPTIIISRATQLDVTVGESVVIPCQVTRDPSLEVRFTWFF
NEQLINFGSHGGYFEKVGGTSAGDIMVRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGP
PGPPLDIRVDEITETTSFVSWRPGPENHSPVFAYNIQTRSPFSLGWQAAKTVPDSLGGDQ
LTALVVELSPWVECEFRVLATNSIGTGEPSKPSQKIKTKDSLPRTTPARVSGGGGSRSEL
VITWEPVPEELQCGPGFGYVVAFRPLGGQNWMQAAVTSPDASRYIFKNESIPPFSPFQVK
VGVYNNRGEGPFGPVTTIYSAEDEPSRAPSRVRVKSLSASEVEVGWKPLPWSTSRTRVMG
YELRYWSTKDKPDTASVMRTVGNRTSAVIRGLDPSSTYYIKLKAYNSAGVGPDSAEVNVT
TKRPPPSQSPAKVMWNTTDSKLILKWDRVKALENESEVMGYKVMYKPSRQIRPNVVETNS
TSLELSLPMDEDYIIQIKPVSEGGDGSSSRQITIPRIAVAHAIGLATERKALPSLLAVAF
CTVRTLL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtcatggaaactgctggtgttgcaattattcatgtggcgcctttcagaaggc
agcggtcctctgaggcccgtgttcaccaaacagccggggagtgtcgtcttccctctccat
tttaatgagcccagtcgggaggtcaccttcaactgtgaagcccagggacatccacccccg
tcctacaggtggaaaatgaatgacagcttcatttctcctcaacctggctctcgatacagc
atctcaggaggaaacctgcgaattagccagctcaataaagaagaagatgctggtatttac
caatgtctggcctcaaactctttcgggaccattgtcagcagagaggctagtctccacatc
gcctatctggaggagtttaaaactcagaggagaagtccagtgaatgtcagagagggccaa
ggtgtggttctcctctgtggtcccccaccatatatgggagagttgaccttttcttggatt
ttcaatgaatatccctcatttgtgaagcaggacacgcgccgcttcgtgtcacagaaaacc
ggcaacctgtacatcgctaaagtcgaaccctcggaagttggaaactacacttgtgtcgtc
accaacacggtgacccagaccacagtacagggacctcctacgccacttgtgctccggagt
gatggcatcatgggtgaatatgagccaaaaattgaagttcagctccctgaaatcttggct
gttgctaaggggttaacagtgaaactggagtgcttcgctttgggaaatccagttcctgtg
atcagctggagaagaacagatgaaaatccgtttcccagaaaagtggatgccaataagtcc
agtggagtgttggagatcccttatttccaacaggaggatgcaggacaatatgaatgcgtg
gctgaaaactccagaggcaaaaacgctgtgaagggacgcctttcattctttgctccccct
catctgctggagaagccccaggatgtgaagaaagctattgatgaatctttgctgtgggag
tgtaaggcgagcgccaagcccaaaccttcctacaggtggctgaagaacggagaaccgctg
gagtcatttgaggaccgaatccaggtggagaacggtgcattgtccatcagcagtctgact
ctgtcagatacagggatgtaccagtgtatcgctgagaaccggcacggccgagtgtttgtt
aacgctgaactcagagtcatcgcagtggctcccgatttctccgacagcctgctgaaggca
cagacattggctcggcagggcggggatgttttgattgagtgcagaccccgcatgtcccca
cgtggcatgatctcctggaggaaaggcaaagaagccctgcgagagagccacagggtctct
gtgctggataatggcagtctccggatttccaacatcaccaaactagatgcaggtctatac
acttgtgtggcgagaaaccagtttggagtggcaagcagtgctggcacactagtggtgaaa
gagccaacaatcatcatttctagagccacccagctggacgttacagtgggagagagtgtt
gtcattccgtgccaggtgactcgtgacccctcccttgaagtgagattcacatggttcttc
aatgagcagctgatcaattttggaagccatggggggtactttgaaaaagttggtgggacg
tctgctggtgacatcatggttcgtaacattcagctgaggcatgctgggagatacacttgt
gccgtacagactaaagtagacagtgcgtccatagcgacagatgtggtggtacgaggtccc
cctggcccaccgttggacatcagagttgatgagatcacagaaacaacatcctttgtgtcg
tggcgtccgggccctgaaaaccacagtcctgtctttgcctacaacatccagaccagaagt
cccttctctctggggtggcaggctgccaaaacagtgccagactctcttggaggagatcag
ctgacggctcttgttgtggagttgagtccatgggtggaatgtgagttcagagttctggcc
accaactctataggcaccggggaacccagcaaaccctcacaaaaaataaagaccaaagat
tcattgccaaggacgaccccggccagggttagcggaggaggcggcagtcgctctgagctt
gtcatcacatgggagccggttcctgaagagctgcagtgtggtccagggttcggctacgtg
gtggcttttcgtcctcttggtggtcagaactggatgcaggcggccgtgacctcccctgat
gcatctagatatatcttcaaaaacgagagcattcctccattctctccgtttcaagtgaaa
gtgggcgtttataacaacagaggagaaggtccttttggaccggtgactactatatactct
gcagaggatgagccgagtcgcgcccccagtcgagtccgtgtcaagagcctgtcagcctca
gaagtagaggtcggctggaagcctctaccatggagcaccagcaggacacgcgtaatgggt
tatgagctgaggtactggagtacaaaagacaaaccggacacagccagtgtaatgaggact
gtgggaaacaggacatcagctgttattcgtggacttgaccccagcagcacatattacatc
aaacttaaagcctacaatagtgctggtgttgggcctgacagcgctgaggtcaacgtcact
actaaaagacccccaccgagccagtccccagcgaaagtcatgtggaataccacagactcc
aaactcatcctcaaatgggaccgagtcaaggcactggaaaatgaatctgaagttatggga
tataaggtcatgtacaaaccgagcagacagattcggcccaacgtggtggagactaacagc
acatctctggagctctctttacctatggatgaggattacatcatccagattaaaccagtg
agtgagggaggagatgggagcagcagtcgacagatcaccattcccaggatagcagttgca
catgcaattggattagcaacagagaggaaagcactaccatcgctcttagcagtagcgttc
tgtacggtgaggactttattatga
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