Triplophysa dalaica: 130409260
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Entry
130409260 CDS
T09616
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130409260 (l1cama)
04517 IgSF CAM signaling
130409260 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130409260 (l1cama)
04090 CD molecules [BR:
tdw04090
]
130409260 (l1cama)
04091 Lectins [BR:
tdw04091
]
130409260 (l1cama)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
L1 family
130409260 (l1cama)
CD molecules [BR:
tdw04090
]
Proteins
130409260 (l1cama)
Lectins [BR:
tdw04091
]
I-type lectins (Siglecs)
130409260 (l1cama)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Bravo_FIGEY
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
C2-set_2
Ig_5
VEGFR1-3_N_Ig-like
Fn3_ROS1
Sp38
Ig_PDGFR_d4
Fn3_VIN3
Glyco_hydro_36C
Phage_T4_Y13C
Motif
Other DBs
NCBI-GeneID:
130409260
NCBI-ProteinID:
XP_056589104
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All DBs
Position
20:complement(3784005..3821176)
Genome browser
AA seq
1276 aa
AA seq
DB search
MPATSPQQVGSRGRCIALLHPLLSLLLIALATRPGQATINIPSKYKIKDLKSPPVITAQP
ESVTTFSADDITLTCEATGNPSPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPI
HKYRGRYNCYVSNVLGTAVSKEARIVTENTPSQQKEKKVAKKVEEGESVVLPCFSPNSTV
APVIHWMDKRLRHIQQNERVIQGLDGNLYFSHVTVEDNREDYTCNTQFPSARIIMLKDPI
KLTVVASNSVVRNRRPQMLRPTGSRSSYLVLSGQTLELECIAQGLPSPKIQWIRIDGALS
ESRSSKDSFDRILRFRNINESDSGEYQCTATNVQGIATHTYSITVEAAPYWIKEPKSQLY
APGEKVELECTADGIPKPTVTWSINGNPLSDIDPDPRRTVKRGTLTLKNLERSDTAVYQC
KAANKHGTILINAYVYVAELPPQILTEDGLMYSVAEGQKIDLACETFGSPQPSVTWEGES
WGSLIANPRMIQTPDGSLQINNASLNDSGQYTCTVKNDKITITAELDVLNKTVIVKPPLA
LRIQRGKPATLTCEYREDSRQDTPQVQWRKKNQKLSESVDSDKYMMDGSNLIIPEVEEGD
EGIYTCEVITTLDVAEASGSITIVDRPDPPTLVQIVDPEDRRVTLSWTPGDDHNSPVLEY
LIEFEEVGSERNEWEELDRVLGSKQRHVLPLMPFISYRFRVIAINEIGKSDPSMQTDPYH
TPAAPPDINPEGVQSDSFEPDTLVITWKELDRQSFNGPGFRYKVMWRKAVGSGPLFHINT
TTSPPFIVTDVGNFTAFEIKVQAVNDMGDGPEAKSTIGYSGEDYPIESPLEVGVDLINST
TIKVTWAPVNKETVRGLLQGYKIYLMHYGPESRHLRRERVREGKPTNVSVVMTKNTKKTL
GDLQPYSHYALSVSAFNNKGEGPQSEPLTFHTPEGVPGPPSTLLLDSPSETEITLRWTPP
SQPNGVLIGYVLQYQQIGNKGSPLQEEMIDGHSASHFTLKKLDRHSRYRFNLMGRTAPGQ
GLPFTLEGATTLDGGPPSNISLSIGETSVNLTWVSKERQRNVAFLIEYLKKDGWSKWKTS
ERVNTSQSFYTLQGLQPGSQYSLRFNFSNNTFYKTEIVTAGARVMEVRGGFVTEGWFIGL
ISALVLLLLILLILCFIKRNKGGKYSVKEKEDGQIDSEARPMNNEAFGEYRSLESDTEEK
GTASQPSLCEDSKLCTDDTLDEYGNSNSVQTEVIMDESLASQSSGVRDPETQESSPLNPA
TAMSHHGLPNSAALLD
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacgtcaccacagcaggtgggcagcagggggcgatgcatcgctctcctgcac
cctctgctatctctcctcctgatagcattggcaaccaggcctggtcaagccaccatcaat
ataccatccaaatacaaaataaaggacttaaaaagccccccagtaattaccgcccaacct
gaatctgttaccaccttttctgccgatgacatcacactcacctgtgaggcaactgggaat
ccctcacccacgttccgatgggtaaaagatggtgtggagttcgacccatccaaagacccg
gatctgtcggtgtccagagattctggaaccttttcgttgacagccaaggatggaccaatc
cacaaataccggggcagatataactgctacgtgtctaatgtactcggcacggctgtgtct
aaggaagctcgtattgtcacagagaacacgcccagccaacagaaggaaaagaaggtggca
aagaaagtggaggaaggagagagtgtggtgcttccctgcttttctccgaacagcacagtg
gctccagtaatccactggatggacaagaggctgcggcacattcagcagaatgagcgtgtg
atccagggccttgatgggaacctgtacttctctcatgtgactgtggaagacaaccgtgaa
gactacacctgcaacactcagttccccagcgcccgtatcatcatgctcaaggaccccatc
aaactgactgttgtcgcctctaactcagtggtgcgtaacagaaggccacaaatgctgcga
cccaccggctcccgcagcagctacctggtgctcagtggccaaaccctggagctggagtgc
atcgctcagggcctaccttctcccaaaatccagtggatcaggatcgatggagccctgtct
gagtcacgttcttccaaagacagctttgaccgaattctgcgcttcaggaacatcaatgag
tctgacagcggcgagtatcaatgtaccgccaccaacgtgcaaggcatcgccactcatacc
tacagcatcactgtagaagccgccccatattggatcaaagaaccaaagagccagttgtat
gcacctggagaaaaagttgaactggaatgcacggctgacggcattcccaagccaacggtc
acctggagcatcaatgggaatcctctttctgatatagacccagaccccagacgcacagtg
aagcgcggcacacttaccttgaagaatttggaacggagtgacactgctgtgtatcagtgc
aaagctgccaataagcacggaaccattctcatcaatgcctacgtctatgttgcggaactg
cctccccagatcctgacagaagatggtctcatgtactcagtggcagaaggacagaagatt
gatctggcttgcgagacctttggctctcctcagcccagtgtcacatgggagggggagtcc
tggggttctctgatcgccaatcccaggatgattcagacacctgatggctctctgcagatc
aataacgcttccctcaacgacagcggccagtacacgtgcacagttaaaaatgacaaaatc
accatcaccgcagagctggatgtactcaataaaacagtcattgtgaagcctccgttagct
ctgagaatccagcgagggaaaccagccacccttacctgtgagtatcgggaagactccaga
caggacactcctcaggtccagtggaggaagaaaaaccagaagctctcggagtccgttgat
tccgacaagtacatgatggatgggtccaacctcataattcctgaggtggaggaaggcgat
gaagggatttatacctgtgaggtcattaccactctggatgtggctgaagcgagcggctcc
attactatcgttgaccgacctgatcccccgaccctagtgcagattgttgatccggaagat
cgccgtgttactctcagctggacacctggagacgatcacaacagccctgtgctagagtat
ttgattgagtttgaggaggtgggatctgaaagaaatgaatgggaggaactggaccgtgtc
ttgggcagcaagcagcgacacgttcttcccctgatgccatttatttcctatcgttttcgg
gtcattgcaatcaacgaaattggcaagagtgacccaagcatgcagactgacccctaccac
acaccagcagctcctccagacatcaaccctgaaggtgtgcaaagcgattccttcgaacca
gacacccttgtcatcacatggaaggagttggacagacaaagtttcaatggaccaggtttt
cgctataaagtgatgtggagaaaggctgtgggcagcggccccttatttcacataaacacc
accacctccccacccttcatcgtcacagatgttggcaactttacagcttttgaaattaaa
gtgcaagctgtcaatgacatgggagatggtccagaagccaaatccaccattggatactct
ggagaggactaccctatcgagtcccctctggaagtgggcgttgatttgattaacagcaca
actattaaagtgacgtgggcacctgtgaacaaagaaactgtgaggggtcttctgcaggga
tacaagatctatctcatgcactacggccctgaaagcagacaccttcgacgagagcgtgtt
agggagggaaagccgaccaacgtctcagttgtgatgacgaaaaacacaaagaagactctg
ggagacctacagccttactcgcactacgccctgagtgtcagtgccttcaacaataaagga
gaaggaccccagtcggaacccctcacttttcacacgccggagggagtacctggtccacca
tcaactctgctgctggatagcccatcagaaacagaaattaccctgcgttggactccgcct
tcccagccaaacggagtcctgattggatatgtactgcagtatcaacaaattggcaacaaa
ggcagtcctttgcaggaggaaatgattgatggacacagtgcatctcatttcaccttaaag
aagctcgaccgtcacagtcggtaccgattcaacctgatggggcgcaccgctcctggtcaa
ggcctgccattcacactggagggtgccaccacactggacggaggtcccccctccaacatt
agcttatcgatcggagagacatcagtcaacctgacctgggtgtcgaaagaaagacagagg
aacgttgctttcctgatcgagtacctgaaaaaggacggttggagcaaatggaagacttca
gaaagagtgaacacctctcagtctttctacacattacaggggctccagcccggatcccag
tatagtctgcgctttaacttcagcaacaacactttctataaaactgagattgtgacggca
ggagcaagagtcatggaggtgcgaggtggatttgtcactgaaggctggttcataggactc
atcagtgcacttgtgctgttgctgctgatactgcttattctctgctttataaaacggaac
aaaggtggaaagtactcagtcaaagaaaaagaggacggccagatagactcggaagctcgg
ccaatgaataacgaagcatttggagagtacagatctctggagagtgatactgaggaaaag
gggacagccagtcagccgtccctgtgcgaggacagtaagttgtgcaccgatgatactctg
gatgaatatggaaacagcaacagcgtgcagactgaggtcatcatggacgagtcactggcc
agtcagagcagcggagtccgagatcccgagactcaggaaagttcccctttaaatcctgcc
acagctatgtcccaccacggcctgcccaactctgccgccctccttgactaa
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