KEGG   Triplophysa dalaica: 130409297
Entry
130409297         CDS       T09616                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdw03041]
    130409297 (smu1b)
Spliceosome [BR:tdw03041]
 Complex B
  Other components
   Complex B specific factors
    130409297 (smu1b)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 LisH_TPL Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 PROPPIN Beta-prop_IP5PC_F CFAP43_N Beta-prop_LRRK2 Beta-prop_WDR75_2nd LisH Beta-prop_DCAF12 LisH_PAC1 DUF7165 VPS8_N LisH_WDR26 PALB2_WD40 DUF6910
Other DBs
NCBI-GeneID: 130409297
NCBI-ProteinID: XP_056589182
LinkDB
Position
2:complement(4270021..4283428)
AA seq 539 aa
MDLEVQSADVIRLIMQYLKENNLHRTLAMLQEETTVSLHTVDSIDSFIADITNGHWDIVL
LSIQYLKLPDTLLIDLYEQIVLELIELGELGSAQCLLKQTDPMIMLKHTQPERYSHTETL
LNTPYFDSEKAYPAGSSKEKRRQAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFSTGKIRKDLKYQAQDNFMMMDEAVLYLAVSH
ESDMVAAGAQDGNIQVWRILNGQCLRKFERAHGKAVTCVCFNKDSSQLLSASFDQLIRLH
GLKSGKMLKEFRGHKAHVNDVIFSHDGQHVISASADGTVKVWSMKTMDCTHTIKTPAIPE
GTDITVNNVILVPKTPDHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGAEFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggatcttgaagtgcaatctgcagacgtcattcgcttgatcatgcagtatctgaaggag
aataatttgcaccggacgctggcgatgcttcaagaggagacgaccgtgtccctgcacact
gtggacagcatcgacagcttcattgcggacatcaccaacgggcactgggacatagtgctt
ctctcgatccaatacctgaaacttcctgacacactgctcattgatctctatgaacagatt
gtacttgaattgatcgagttgggagaactagggtcagcccaatgtttactgaagcaaacc
gatcccatgatcatgctgaagcacacacaacctgagcgttactcgcacacggagactctt
ctcaacacgccttactttgactcagagaaggcgtatccagcgggcagtagcaaagagaag
cgcagacaggctatcgctcaagcttttgcaggagaggtctgtttggtgccaccctcacgt
ctcatggctctgctgggccagggtcgtatatgtgaaggggctctttacagattacaggaa
accaaagcactgaggcagtttggctcattagcaatgctgtctttaaagtggcagcagcat
cagggacttttacctccaggcatgtcgttggaactgttccgtggcaaaggtgcattgaag
gacatggaggaagaacgcttcccgacgcagctgagtcgccttataaagtttgggccaaaa
tcccacgtcgagtgtgcacgcttctcccctgatggacagtacctgatcactggatctgtt
gatggtttcattgaggtctggaacttcagcacgggtaaaattcggaaggatctgaaatac
caagcccaagacaatttcatgatgatggatgaggccgttctgtatctggcagttagtcac
gaatcagacatggtcgccgctggagctcaggatggaaatatacaggtttggaggattttg
aacggccagtgtctgcgaaagttcgagcgagctcacgggaaggcagtgacctgcgtctgc
ttcaacaaagacagcagtcaactgctcagtgcctcctttgaccagctcatcagactacat
ggcttgaaatcaggaaaaatgctgaaggagtttagaggccacaaggctcacgtaaacgat
gttatcttctcacatgacggtcagcatgtcattagtgcatcagcagacgggacggtgaag
gtctggagcatgaagacaatggattgcacccatacaattaaaacccccgccattcccgag
ggtacggacatcacggttaacaatgtcattctcgtcccgaaaactccggatcactttgtg
gtgtgtaatagaaccaacacggtggttgttacgaacattcatggccaggtgatgaggagt
ttctgttcgggggtgagagagggggcagagtttgtctgctgcacgttgtctccgcgtggc
gagtggatctattgcgtgggagaggactatgtgctttactgcttcagcaccatcactggc
aaactggagagaaccctcacggtccatgaaaaagatgtgatcggcataacccatcaccct
catcaaaatcttatcgccacatacagtgaagacggtctgctcaaactctggaagccctga

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