Triplophysa dalaica: 130409369
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Entry
130409369 CDS
T09616
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
tdw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130409369 (ube4b)
04120 Ubiquitin mediated proteolysis
130409369 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130409369 (ube4b)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130409369 (ube4b)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
U-box type E3
130409369 (ube4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
130409369
NCBI-ProteinID:
XP_056589280
LinkDB
All DBs
Position
20:3369840..3386580
Genome browser
AA seq
1353 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGALLQSVPAAP
SHSLGLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLAERDSTSNPDLSEEQALQLICKILRVS
WKEQDRDVIFMPSLAAEFQKNPKDVYSDFKDLIGQILMEALMMSTRTRDCNPFASLTATS
QPITAARSPDHHLTLIPPSSQSGSPMMPTAGSFGASSLSSLYGCSPNPLALSSARMSAPS
APLASSAPLASPASLVPPSPPVPRPPTSLPSLSPSTPLPISQRYRPYSLNSSVPISPSPS
GMLTPPTTSGIPSSPSPRHRTNQTSSTPFPFLPSSPGTVARRTAVAAQMPSSPFSLLFFG
LSEMSQDSSDEEPEEEEEDFSAVQFGSSLGASGGGMVGDSGSDRFTIESSKETEMLNYLI
ERFDSVGMEERKAPKMCSQPVVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPSLLVPY
MLCRNLPYGFIQELVRMTHQEEDVFKQIFVPILQGVAQAVKECSFDSDNFKFPLMALAEL
CEIKYGKTHPICSLITSLPLWCPDPLSPGTGREIQRLSFLGSFFSLSVFAEDDTKVGDKY
FSGPAITTENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKK
AQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLDTVDPFYIFHRKCRLNVTPEETRLKSTM
EELKSWITELHGDSSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVE
ELKNSENQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVI
QLILRMVEPAYPHVSLPLNPEIPKSFGALPEFYIEDVAEFLLFIVQYFPQVLYEPCTEDI
VTFLVVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHPLSVNQLVPALM
KFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIGHQGTFLEEFNSGKQFVRYINMLI
NDTTFLLDESLESLKRIHEIQEEMKNKEQWDQLPRDQQQSRQSQLTQDERVSRSYLALAT
ETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKL
LDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLSDKV
EEIVARNSQSEMDYSDAPDEFKDPLMDTLMSDPVQLPSGNIMDRAIILRHLLNSPTDPFN
RQTLTESMLEPVPELKERIQTWMREKQSGRFSQ
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaggagattcgaagaaggcgactggcccggttagctggaggg
cagacgtctcaaccaagcaccccccttagcacccctttgacctctccacagagagagacc
cccccaggacccttacccggaccctctggggccttgctgcagtctgtcccagcagctcca
tctcacagtctgggccttaatgcccaaaatgtcacccctgccacctctccaatgggggca
tcaggggtcgcttaccgcagccagagcagcgagggggtcagctctctctccagctctccg
tctaatagcctggagacgcagtcccaatctttgtcccgctctcagagcatggacatcgac
acggcctcctgtgagaagagcatgtcccaggttgatgtggactcaggaatagagaacatg
gaagtggaagacagtgaccgcagagagaaaaggaacttggctgaaagggactctacgtct
aatcctgacctctctgaagagcaagctctgcagctcatatgtaagatcttgcgtgtttcc
tggaaggaacaggaccgtgatgtcatcttcatgccttcacttgctgctgagtttcagaag
aaccctaaggatgtttactctgacttcaaagatctgattggtcagattttaatggaggct
ctcatgatgtccacccgtacgcgtgactgtaacccattcgccagcttgaccgccacatct
cagccaattactgctgccagatccccggaccatcacctgactctcatcccgccctccagc
cagagcggcagtcccatgatgcccaccgcaggctcatttggtgccagctctctgtctagt
ctttatgggtgtagcccaaaccctctagctctgagctctgccagaatgagcgctccatct
gccccactggcttcatccgcccctttggcttctcctgcatctttggttccccccagtcct
ccagtccctcgccctcccaccagcctcccatctctgtccccatccacccctctgcccatc
tcccagaggtacaggccctactcccttaactcctctgttcccataagcccgagcccatct
ggtatgcttacgccccccacaacctcaggtataccctctagcccctcccccagacaccgt
acaaaccaaacctcctccacgccattccccttcctacccagctcccccggcactgtggcc
agaaggactgcggttgctgctcagatgccctctagtcctttctccctcctcttcttcggc
ctgtccgaaatgtctcaggacagcagtgacgaagaacctgaggaagaggaggaggatttt
tctgcggttcagtttgggtccagcctgggtgcatctggagggggaatggttggtgactca
ggtagtgaccgctttaccatagagtccagtaaagagaccgagatgttgaactacctcatc
gagcgttttgacagtgtgggtatggaggagaggaaagccccaaagatgtgcagccaacca
gttgtcagtcagctgctaagcaacatacgttcccagtgtatttcccatgctgcacttgtg
cttcaaggtgccctcacccagcccagagcccctctacagccctccctgctggttccctac
atgctgtgccggaaccttccgtacggctttatccaggagctggtgcgcatgactcaccag
gaggaggatgtgtttaaacagatctttgttcccattctgcaaggggttgctcaagctgtg
aaagaatgttcctttgactctgacaacttcaagtttcctctgatggctttagctgagctt
tgtgagatcaagtatgggaagactcaccccatatgcagtttgatcacctctttgccattg
tggtgtcctgacccactcagtcctgggacagggagagaaattcaaagactctccttcctg
ggctctttctttagtctgtctgtgtttgcagaggatgatactaaagtgggagacaagtac
ttttcaggtcctgccataactacggagaacactcgtgtggtcagccagtcgcttcagcac
tatttggagtctgccaggggagatctatttaaaatcttgcacaatatcttgctgaatgga
gaaacaagagaagctgctctgagctatatggcagctctggtgaaccgtaatgtgaagaag
gctcagatgcagaccgatgacaagctggtgtccacagatggcttcatgatgaacttcctg
tgggtgctgcagcagctgagtatgaagatcaagctggatacagtggatcccttttacatc
ttccaccgcaagtgtcgtctgaacgtcacccctgaagagaccaggctcaaatccacaatg
gaggagctgaagagttggatcacagagctgcatggtgactcatccaagttttcagagccc
aagtttcccaccgagtgcttcttcctcactctacatgcacatcacctgtccatcctgccg
tgctgccgacgctacattcgtagactgagggccatacgagatctgaacagaacggttgag
gagttgaagaacagtgagaaccagtggaaggattccccgttggctagtcgtcatcgtgaa
atgctgaagagatgtaaaacccagctgaagaaactggtgcgctctaaagcctgcgcagac
gcagggctcctggatgagaacctgctgcgcagatgtctgcagttcttcagtatggtcatc
cagcttatcctgcgcatggtggagcctgcctatccacacgttagcctgcctctgaaccca
gagatcccaaaaagctttggagcactgcccgagttttacattgaagacgtggccgagttc
ctgctttttatcgtgcagtactttccccaggtcctgtatgagccatgcactgaggacatt
gtgaccttcctggtggtcttcatttgcagtcagaactacataaagaacccgtacttgatt
gccaagctggtggaggtgctctttgtcaccaaccctgcagtgcagccgcgcacccagcgg
ttcttcgagatgatggagaaccacccgctgtctgtcaatcagctcgtccctgccctcatg
aagttctacacagatgtggagcacactggagcaactagtgagttttatgacaagttcacc
atccgctaccacatcagcaccatatttaaaagcctgtggcaaaacattggccatcaaggg
accttcctggaggagttcaactctggaaagcagtttgtgcgctacatcaacatgctaatc
aacgatacaacttttctgctggatgagagtctggagtccctgaaacgcattcatgaaatc
caggaggagatgaagaacaaagagcagtgggaccagctgcccagggaccagcagcaaagc
cgtcaatcccaactgactcaggatgagcgggtgtcacgttcctacctggctttagccaca
gagacggtagacatgttccacatcctcaccaaacaggtccagaagcccttcctgaggcct
gaattgggtcctcgcctggctgccatgttgaactataaccttcagcagctgtgtgggcct
aaatgtcgagacttgaaggttgaaaaccccgaaaaatatggttttgagccaaagaagctc
ctggatcagctcactgatatttacctgcagctcgactgtcctcgatttgctaaagccatc
gcagatgaccagcgatcatacagcagggagctctttgaggaggtcatttccaaaatgaga
aaggctggaataaaatccaccatcgctattgagaaattcaaactcctgtcagataaggta
gaggagatagttgcccgcaattcacagtctgagatggattacagcgacgccccagatgag
tttaaggatcccctgatggacactctcatgtcggaccccgtgcaactgccctctggtaac
atcatggatcgggccatcatcctgagacaccttctgaactctcccacagatccgttcaac
agacagactctcactgagagcatgctggagccagtcccagagctgaaagaacgtatccag
acctggatgagagagaaacagagtggccgtttttctcagtga
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