Triplophysa dalaica: 130409661
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Entry
130409661 CDS
T09616
Symbol
nfatc2a
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04148
Efferocytosis
tdw04218
Cellular senescence
tdw04310
Wnt signaling pathway
tdw04370
VEGF signaling pathway
tdw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130409661 (nfatc2a)
04370 VEGF signaling pathway
130409661 (nfatc2a)
04020 Calcium signaling pathway
130409661 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130409661 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
130409661 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130409661 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130409661 (nfatc2a)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130409661 (nfatc2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
130409661
NCBI-ProteinID:
XP_056589738
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Position
20:complement(17325809..17352568)
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AA seq
901 aa
AA seq
DB search
MSSFYGDKVDLGLAEELSQVNCQDELEFADLFEYGFSAGQQDEPSISSHKDLNSPPSLSY
HLEEAPPYGIKPCVPTYLEVGAEGLSGFKQLDAKSYLEQVGTNNHALSPRIEITPSREHY
SHGRESLQHHLVNTSPSPGLTVPGHDPLAYREPQCLSPASSNSSTSWHSENLSPWASPCV
SPSNSQAAGELCPRLQGVHTGSPRTSPGTSPHTSLAEDGSVGPRSPSPRPGSRSTSPLCK
RTYEMYRNPNLVPGSRSRSPSPHGGHDEHHSGHYGLNNLSGALNGFGVGQVCSIPPKIVK
TSQQAYPLYTDNHTESYLVSCDQDVKNKPGSEPFFVIPQIWPKQLVPGICSIPVTSLPPL
EWPLPKRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLRGYRGKEPLCLQ
IFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIMNGTKVLEIPLEPKNNMKAIIDCAG
ILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQQGGQTVSLQLASHPIECSQRSAHEL
PMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFTEKTHDGQQIWELEATVDKDKSQASM
MFIEVPPYRDPSICHPSKVNFYVINGKRKRSQPQHFTYTPLPVPSIKTEPVDDYESRQVR
YSMSQMMGVSPQSYYNPRGIIAPDSGLVXPALVPCQQVRLGVSPPDHRFQQQSPVIYPRP
AKAMASSPSVVYSQTGASMMPDSHRSVLVHTGSPAQSSHLGGPHPTNQHPSIIQFSPTNH
HLLRGGDPPAPPPPEHQHIMYCEGYSQAVGTSRSPAPAQAPQQSQNYPTVIQQQPFVPRV
TKDRSPPVQVESPRCSSAEEQGSSAPGRVTVKEENLDQAYLDDVNEIIRKDLTGVHGRGQ
T
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgttttacggagataaagtggacttggggctggcagaggagctgagtcaggtg
aactgccaggatgagctggagtttgccgatctctttgaatatggattttctgccggacaa
caagatgagccaagtatctcctcacacaaagatctcaactctcctcccagcctttcctat
cacctggaggaagccccgccttacggcatcaagccttgtgtgcccacctacctggaggtc
ggcgctgagggtctctctggtttcaagcaactggacgcaaaaagctaccttgagcaggtc
gggaccaacaaccacgccctgagccccaggatcgaaattaccccttcccgtgagcactat
agtcatggtcgagaatccctccagcaccatcttgtgaacaccagccccagtcctgggctc
actgtgccgggtcacgatcccttagcttaccgagagccacagtgcctgagtcccgccagc
agcaactcatccacctcctggcactctgagaacctctcaccctgggcgtcgccctgtgta
tcgcctagcaacagtcaggcagcgggggagctttgcccgcgactacagggcgtccacacg
ggatctcctcgtacgagtccgggaacctccccccataccagcctggctgaggacggctcc
gttgggccacgctctccttcgcccaggcccgggtcacgttccacctcccccctatgcaaa
cgcacctacgagatgtacaggaaccccaacctggtgccagggtcccgctcgcggagcccg
tcgccacacggcggtcacgatgagcatcacagtggccattatggtctgaacaacctgtcc
ggtgccctgaatgggttcggagttgggcaggtttgctccattcctcccaaaattgtgaag
accagtcagcaggcctatcctctgtacacagacaaccacactgagagctacctggtgtct
tgtgaccaggacgtaaaaaacaaacctggttctgaacctttctttgtaattccacaaatc
tggcctaaacagctggtgcctgggatatgcagcatccctgtgacgtctctgcctcctctg
gagtggccgctgcccaaacgcaccgatcagtatgagctgcacatcgaggttcagcccaaa
ccccaccacagagcccattacgaaaccgagggcagtagaggggcggttaaagcccccact
ggaggtcacccagtggtccagctccgtggatatagggggaaggaacctctgtgccttcag
atctttattggcacagcggacgagcggatcctgaagcctcacgctttctaccaggtccat
cgcattactgggaaaaccgtcactaccaccagctacgagaagatcatgaacggcaccaaa
gtacttgaaatccctttagagccaaagaataacatgaaagcaataatcgattgtgctgga
attctgaagctccggaacgctgacatcgagctgcgcaagggggagacggatattgggcgg
aaaaacacccgtgttcgactggtgttccgtgttcacatcccgcagcaaggaggccaaact
gtgtcgctccagctggcttcgcatcccattgagtgctcccagagatcagctcacgagctg
cccatggtggagaaacaggacatggactcgtgttcagttctcggaggtcagcagatgatt
ctcaccggccagaacttcagctcagattcaaaggttatcttcacagagaagactcatgat
ggacagcaaatttgggaattggaagccacggtagacaaagataaaagtcaggcaagcatg
atgttcatcgaggtgcctccttacagagacccgtccatttgccatccctctaaagtgaac
ttctacgtaataaatggaaagaggaagcgcagtcaacctcagcatttcacctacacgcct
cttccagttccgtctattaagaccgagccagtggatgactatgagtccaggcaggtgaga
tactccatgtcacagatgatgggggtgtctccccagtcgtactataatccacgcgggatc
atcgcccctgacagcggcctggtgnnccctgccctcgtcccctgccagcaggttcgcctg
ggcgtctctcctccggaccaccgattccagcagcaaagcccggtcatctacccccgtcct
gcgaaggccatggcaagcagtccctctgttgtatactcccagacgggagcctctatgatg
cccgactctcatcgctcagttctggtccacacaggttccccggcccagtcctcccacctg
ggtggcccgcatcccaccaaccagcatccctccattatccagttctctcccaccaaccac
cacctgctcagaggaggagaccctcccgcaccaccacctccagaacatcagcacatcatg
tattgcgagggctatagccaagctgtcggaaccagccgctctcctgccccggcgcaggca
cctcagcagtctcagaattacccaacagtcattcagcaacagccgttcgtgccaagggtg
accaaagacagatcgcctcctgtacaggtggagtctccgagatgttcctccgcggaagag
cagggaagcagcgctcctggaagagtcacggtgaaagaggagaacctggatcaggcgtat
cttgatgacgtgaatgagatcataaggaaggatctgacaggagtgcatggcagaggtcaa
acataa
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