Triplophysa dalaica: 130409827
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Entry
130409827 CDS
T09616
Symbol
podn
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tdw00535
]
130409827 (podn)
Proteoglycans [BR:
tdw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
130409827 (podn)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
130409827
NCBI-ProteinID:
XP_056590032
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Position
20:17950057..17962290
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AA seq
600 aa
AA seq
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MGHRCGLLELVLLVLLGCTFVRGQGETHLEIHLPEEEDVEMDGEEEDSTGAVTNPKVKIS
CPEKCSCTVEGSVDCNGVSLNEFPEELSEHTRQLSLQNNLITEVTLEHLSHLQQLETLNL
QNNRLTTQGLDDEAFHILERLSYLYLANNKLTAAPRQLPASLVSADFAANHLTKIYPETF
GQKPALKSVYLHNNKLTDAGLPENMFNGSDNLEIFIMSSNFLRYVPKGLPRALYRLHLKN
NKLEKIPSGAFDNLFHLRELYLQNNVLSNDGVDNETFSLLNSLEYLDLSNNNLTAVPLGL
PRNLILLHLEKNSIQGIGANALTPIRNLEYLLLHNNKLRSRLIHPSAFHGLKRLHTVHMY
NNLLERVPRGLPRRAKTLMLLHNIISEIGRNDLITLYTLTELNLSYNHLTSAKLHREAFR
KLRLLETLDLSGNRLQTLPMGLPKSLHVLKVKDNQMTEIPEGSLSGMSKLKELNVANNQL
KLNSIYQGAWQELSALTTLDLSVNMLSHIPADLPESLEYLHLQNNRISTITATAFINTPN
IRGIFLRFNRLSVHSVSEESFSHLSKLQVLDIGHGNISPNRGQEDEEGDLPYGDDEETDV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaccggtgcggcctgttggagttggtgttactggtgcttctgggctgcacgttt
gtgcgaggtcagggagaaacacacctggagattcacctgcctgaggaggaagacgtggaa
atggacggagaggaggaagactcgaccggagccgtgaccaatccaaaagtaaaaatatct
tgtccggaaaagtgcagctgcacagtggagggatcggtggactgtaacggagtcagtctg
aatgaattcccagaagagttatcagaacacacccgtcagctctctttgcagaataacctt
atcacagaggtcacactggaacatctttcacatctgcagcaactggagacgctgaacctg
cagaacaatcgtcttacaacacaaggtcttgacgacgaagcgtttcatattctggaaagg
ctgagttatttatacttggcaaataataagctcacagccgctcccagacagctgccggct
tctctggtcagtgctgacttcgctgctaaccacctcaccaaaatctaccccgagactttc
ggccaaaagccagctctgaagtcagtgtatcttcataacaacaagcttacggatgccggg
ctaccggagaacatgtttaatggatccgataaccttgaaatcttcattatgtccagtaat
ttcctccgctatgttcccaagggtctgcccagggccctctaccgcttacacttgaagaat
aacaagttggagaagattccctcgggtgcgttcgataatttgtttcatcttcgagagctc
tacctacaaaacaacgtcttgagtaatgatggcgtcgacaacgagaccttcagccttttg
aacagtctggaatatcttgatctgtccaacaacaatctaactgcggttcccctcggactc
cctcgaaatctcatcctgctccacctggagaaaaattccatccagggcatcggggccaac
gctctgacgcccatccgtaacctggaatacctcctcctccacaacaacaagctccgctct
cgcttaatccatccatccgcctttcacggcctcaaacgtctgcacactgtccacatgtac
aacaacctcctggagagagttccccgcggcctcccacggcgagccaagaccctcatgctt
cttcacaatatcatcagcgagatcggacgcaacgacctgatcacgctttacacgctgacg
gagctcaacctcagttacaaccacctcaccagcgccaagctgcacagagaggccttcagg
aaactcaggcttctggagaccttagatctgtcggggaaccggctgcagacgcttcccatg
ggacttcctaagagcctgcacgttctgaaggtgaaggacaatcagatgacagagatcccg
gaggggtcgctgtcggggatgagcaaactgaaggagctcaatgtagccaacaatcagctg
aagttgaactccatctaccagggagcgtggcaggagctgagcgccctcacgacgctggat
ctgtcagttaacatgctgtcacacattcctgccgacctgcccgagtctctggagtatctt
catctgcagaacaacagaatcagtacaatcacagcaacagccttcatcaacacacccaac
atcagaggaatcttcctcagatttaatcgactctcagtccattcggtgtccgaggagtct
ttttctcacctgtctaagcttcaggtgctggacatcggccacggcaacatttctcctaat
cgagggcaggaagatgaagagggggatttgccgtatggagatgatgaagagacggatgta
tga
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