Triplophysa dalaica: 130409930
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Entry
130409930 CDS
T09616
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03083
Polycomb repressive complex
tdw04980
Cobalamin transport and metabolism
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130409930 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130409930 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130409930 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130409930 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130409930 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130409930 (hcfc1a)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130409930 (hcfc1a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130409930 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
130409930 (hcfc1a)
MLL-HCF complex
130409930 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130409930 (hcfc1a)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130409930 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130409930
NCBI-ProteinID:
XP_056590129
LinkDB
All DBs
Position
21:7840832..7857622
Genome browser
AA seq
1809 aa
AA seq
DB search
MTSPGSTVPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGSKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSNITGWDVPVTYGVLPPPRESHTAVIYTEKTTKKSRLIVYGGMSGCRLGDLWTLDIDT
MTWNKPGIGGAAPLPRSLHSATIITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSLSWETVLMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPTATAATSPALGAASSL
PGNSPRSPAPAAAAPSAQNLPQSGITLIPQAASPTASVTPGSPLAASTARGPAFLKVAAP
QSGTGTSIVTLRQAAQAGKSPVTVTSLPAGVRMVVPTQTTQGTPIGSSPQMSGMAALAAA
AAATQKIPPSAGTTVLNVPAGATIVKTMALTPGSTTHPATVKVGSPVMVSNPATRMLKTA
AAQVGSPTVSSSTTGARPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLSMGST
GTLFSNLGKVVSVVQTKPVQTGALTGQATTNSLAQILQSKGPLPPGTILKLVTSADGKPT
TIITTPQSGVTGNKPTILGISGMSPGSTGKPGTTTIFKTIPMSALQHGAAGLTSSTGVKS
PITIFTTKMMTSGTQGKIITTMPKIGTATGQQGLTQVVLKGAPGQPGTILRTMPMGGMRL
VSPVSVGGVKPTVTTLVVKGTTGATTLGTGTGTVSTSLAGGSIASANATLATPITTLGTI
ATLSSQVINATAVSAAQSSLTTVSSSAQPTQVTLITTPSSVEAQPGQDLPVSILASPTSE
QPTSSESGAGDAAGTVTLVCSNPPCEIHETGTTNTSTTATANMGTVPGSTVQRVCSNPPC
ETHETGTTNTATTASANMGNAQTAAVQRVCSNPPCETHETGTTNTATTASSSMGGNQTGT
VQKVCSNPPCETHETGTTNTATTASSSMGGNQTGTVQKVCSNPPCETHETGTTNTATTAS
SSMGGNQTGTVQRVCSNPPCETHETGTTNTATTASSSMGENQTGTVQKVCSNPPCETHET
GTTNTATTATCSMETDEGEAQQSSEASESTSSTEVPTSSAAPQSRAITIVTQATPIPGPS
VPSISSITESSEASAEPVVMESSEAESLQTEGQAEAEAVTTQAEFQAEAVAVAMPSDFQG
EAEALPSDFKGEAEAMQAESQAETGALPMEHEATCMEEGEMAAEQLPAAEMEGVEAASAS
QDAEALALPPELMSDGQSTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQA
AQQAVMSSGEGGRDDQQTHTIPIILTQQELAALVHQQQQLQAAQQQAAAQAALPTEGLAP
ADSLNDPSSESNGHGEIAAASAVAGLLPRTTTETLAPSSTLAPAVVASPAKMQAAAALTE
VANGIEALKQNPPTVTVKPPVKKENQWYDVGIVKVTNMVATHFYMPADDSAYVEDDSGTT
PDYTQMKRVELQPGTAYKFRVAGINTCGRGTFSEISAFKTCLPGFPGAPCAIKISKSPDG
AHLTWEPPSVTSGKITEYSVYLAIQSSQTTEAKASTPAQLAFMRVYCGPSPSCLVQSSSL
SNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGVSAKPAPKRAVSSPDAKGI
GLKKARMDQ
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccaggttccactgtgcctggaaccaccggagctccgctgcagccccgatgg
aagcgggttctggggtggtccgggccggttccccggccaagacacggacatagagcggtg
gccatcaaggagctaatggttgttttcggcggtggaaacgaaggaatcgtcgacgagttg
catgtttataatactgcaacgaaccaatggtttataccggctgttcgtggagacattcct
ccaggctgtgcggcgtatggttttgtatgtgatggcacacggctgttggcgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaggccccaaaaaatggggcgccgccatgtccgcgtctggga
cacagtttttctcttgttggcagcaagtgctatctctttggggggcttgccaatgacagc
gaagaccccaagaataacattcccagatatttgaatgacctttatactcttgagcttcgt
ccgggctccaacatcacgggttgggatgtaccagtcacgtatggagttctgccacctcca
cgagagagtcacactgctgttatttatactgaaaaaactactaagaagtcccgtctcatc
gtatacggaggaatgagcggctgtcgtttgggagatctttggacattagacattgataca
atgacctggaacaaacccgggatagggggcgctgcaccactcccccggagtcttcactcg
gccaccataatcacaaacaaaatgtatgtttttggaggctgggttcccctggtgatggat
gatgtaaaagtggccacacatgagaaggaatggaagtgcacaaacacattggcctgtctg
aacttggactcgttgtcctgggagaccgttttaatggacactttggaagacaacataccc
cgggcacgagcgggacattgctcagtcgctatcaacaacaggctttacgtgtggagtgga
cgcgatgggtatcgtaaagcgtggaacaatcaggtgtgctgcaaagacctctggtacctg
gagacagaacgacctaatgctccttcaagagtacagcttgtccgagccaacacaaattct
ttagaggttagctggggagctgtgtctacagcagatacgtacctgcttcagcttcagaaa
tacgatatcccgacagccactgctgccacctcaccagccctcggcgcagcttcctctctc
cctggaaactcgccaaggagtccagcgcccgcagcagctgctccatctgcgcagaatctg
ccccagagtggcatcactctcatcccgcaggctgcatcccccacagcctccgtcacacca
ggaagtcctctggcggcctcaacagctcgtggcccagcttttctaaaagttgcagcccct
cagtcaggcaccggcacatcgatcgtcaccttgcgacaagccgcccaagctggaaaatcc
ccagtcactgtgacatcacttcctgcaggtgttcgtatggtcgtgccaacacaaacaacc
caaggaacgcccataggcagcagccctcagatgagcggaatggcagctttggcagcagct
gccgcagctacacagaaaattcccccctctgccggaaccactgttcttaatgtaccggct
ggggccacaatagtcaaaacaatggctcttacgcctggatccaccactcatcccgccact
gttaaagtgggatctcctgtcatggtaagcaaccctgccactcgcatgctgaagacagcc
gctgctcaggtgggcagtccaacagtgtcgagttccactacaggcgctcgacccatcatc
acggtgcacaagtcaggcactgttaccgttgctcagcaggcccaagttgtgaccactgtg
gtgggcggagtcaccaagacaatcactcttgtcaagagcccactttccatgggaagcact
ggcaccctgttctctaatttgggcaaagtggtgtcagtagttcagaccaaaccagttcag
acgggcgccttgactggacaggccaccaccaattcactggctcagattttacagtcaaag
ggtccccttcctcccggcaccattctgaagctggtaacatctgctgatggaaaaccaacc
accataattacaacccctcaatcaggggtcacaggaaacaagcccaccatcctgggcatc
agtggcatgtctcccggttcaaccggcaagccgggcaccaccactatctttaaaacaatc
cccatgtctgctttacaacatggagctgcaggtctgactagtagtacaggggtgaagagc
cctatcaccatcttcactactaagatgatgacatctggaactcaaggcaaaatcattaca
acaatgcccaagattggcacagcaacaggccagcaaggactaacacaggttgttttgaag
ggtgctccaggtcaacccggaaccattcttcgcaccatgccaatgggaggaatgcgcctt
gtgtctccggtatcagtgggtggggtcaagccaactgttaccacactggttgtcaaggga
acgactggtgcaacaacacttggcaccggcacaggtacagtttctaccagtttagcagga
ggaagcatagccagtgccaatgccaccctggcaacccctattaccactctgggcaccatt
gccaccctctccagccaggtcattaatgctaccgctgtgtctgcggctcagagcagcctg
actacggtctcatcttcagcgcagccaacccaggtcaccctcataactacacccagtagt
gtggaggctcaacctggccaagacctgcccgtttccatcctggcctctcccacctctgag
cagcccacttccagtgagtctggagcaggtgatgccgctggcactgttacgctagtgtgc
tccaaccccccttgcgagattcacgagacgggcaccaccaacacatccaccaccgcaacg
gcaaatatgggtactgtgccaggcagcacggtccagagggtgtgctcgaacccaccctgc
gaaacacacgaaacgggtacaacaaacacagccaccacagcatctgccaatatgggcaat
gcccagacagccgctgttcagagggtctgctccaacccaccctgtgagacccatgagacg
ggcaccaccaacactgcaaccacagcatcatctagcatgggtggaaaccaaacgggaacg
gtccagaaggtctgctccaacccaccctgtgagacccatgagacgggcaccaccaacact
gcaacaacagcgtcatcgagcatgggtggaaaccaaacgggaacggtccagaaggtctgc
tccaacccaccctgtgagacccatgagacgggcaccaccaacacggccaccacagcttca
tctagcatgggtggaaaccaaacgggaacggtccagagggtctgctctaacccaccctgt
gagacacacgagactggcaccaccaacactgcaaccacagcatcatctagcatgggtgaa
aaccaaacaggaacggtccagaaggtctgctccaatccaccctgtgagacgcacgagact
ggcaccaccaacacggccaccaccgccacatgcagtatggagaccgatgagggagaagcc
caacagagtagcgaagcatcagagtccaccagcagcacagaagtcccaacatcatctgcg
gcacctcagagccgagccatcaccatagtcacacaagcaacacctataccaggaccatct
gttccatctatctcttccatcacagagtcttcggaggcaagtgccgagcctgttgttatg
gaaagttccgaggcggagtccttgcaaacagagggtcaggctgaagcagaggcggtcacc
actcaggccgagttccaggcagaggcagtggcggtggccatgccaagcgacttccaggga
gaagccgaggctttgccaagtgacttcaagggagaagcagaagccatgcaggcggagagc
caagctgagacgggcgcgctgcccatggaacatgaggccacttgtatggaagagggagaa
atggccgcagaacagctaccagcagcagagatggagggagtagaggcagcatcagcgtcc
caggatgccgaggccttagccctgccacccgagctaatgtcggacgggcagtccacaacg
ctgatggtgacaggtttgacaccggaggagctggccgtcacggcggccgcagaggcagcg
gcccaggctgcagctacagaggaggcacaggcgctcgccatccaggctgtgttacaagca
gcccagcaggctgttatgagttctggtgaaggcggaagagatgaccagcagacccatacc
atacccatcattctgactcaacaggaactggccgccctggttcatcagcagcaacagctc
caggcagcccagcaacaggccgccgcccaggcagctctgcccacggagggcttggctccg
gccgacagcctaaatgatccatcttcagagagcaatggacacggcgagatagcagcagca
agtgcagtggccggactgctgccacgcaccaccacagaaacattggctccatccagcact
ttagcacctgctgtagtcgccagtccagccaagatgcaagcagcggcagctctgactgaa
gtggccaatggaattgaggctctgaaacaaaatcctcccactgttaccgtcaaaccacca
gttaagaaagaaaaccagtggtatgatgttggcattgtcaaagtaaccaacatggttgca
acacatttctacatgcccgcagacgactccgcttatgttgaggacgattcaggcacaact
cccgactacactcagatgaagagggtggagcttcagcccgggactgcctacaagttccgt
gtggcgggtataaacacctgtggtcgtggcaccttttctgaaatatctgcttttaagacc
tgcttaccaggattcccaggggcaccgtgtgctataaagataagcaagagtccagatggt
gcacaccttacatgggagcctccatccgtgacatcaggaaagatcacggagtactctgtg
tatttggccatccagagtagccagaccaccgaggccaaagcctctaccccagcccagctg
gctttcatgcgtgtttactgtgggcctagcccctcctgcctggtccagtcctccagcctg
tccaacgcccacatagactacaccacaaaacctgccatcatcttccgcatcgcagcacgc
aacgagaaaggttacggcccagctacccaagtgcgatggcttcaagagtcgagcaaagat
ggcgtctctgcaaagcctgccccaaaaagagcagtttcttcaccagatgcgaaagggatc
ggtctgaaaaaagcaagaatggaccagtga
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