Triplophysa dalaica: 130409972
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Entry
130409972 CDS
T09616
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tdw
Triplophysa dalaica
Pathway
tdw04517
IgSF CAM signaling
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130409972 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130409972 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130409972 (sptbn1)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130409972 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
130409972 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
PMC2NT
PH_13
Motif
Other DBs
NCBI-GeneID:
130409972
NCBI-ProteinID:
XP_056590208
LinkDB
All DBs
Position
21:complement(1201680..1263719)
Genome browser
AA seq
2348 aa
AA seq
DB search
MTTVAAEYEHMDIQQTYQDSVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYTNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDAEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRITARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNTNAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAADRHARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKARLEEACSLHQFQVDADDVDAWTLDALRIVSSADVGHDEFSTQA
MVKKHKDASAEVASYRPVIDALHEQAQALRPEQAQAANVSERLSGIEERYKEVSELTRLR
KQALQDALARYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNNRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LGDEHPDQAKAITGRLAEINSVWEEMKETLRNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMANTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDSQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYALAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLTSDGNINAERIQERAASIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELTLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKDGKQLVSEKPETDSVVKEKLSGLQKMWTELESTTQTKAQCLFDANK
AELFTQSCADLDKWLQGLEGQIQSDDYGKDLTSVSILLKKQQILENQVEVRQREVDELQS
QAHVLRQEGKDTDEVDGRREVVEQKFQELLEPLIKRKKFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQRRCDDIFERSQSTLEADSPNVEG
IRARLADLQQLWSLIMQETEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEERRRKPPT
PDPAQDTDAQQRDGEQIAQNGLPSDQDSPRDGVDGEMNGVPEKSSKEGSPVPSPTAERRA
KGSQSSTLPAKGQDSPTAQLEGFLHRKHEWEGHNKKASNRSWHNVYCVINNHEMGFYKDN
KTAGQGIPYHNEIPIGLKEAVCEVAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEMNTWIQ
AIQNAGSASSSSEKTEITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEKRF
SLFSKKKQ
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaacacatggacatccagcagacgtaccaggacagc
gtcaacaaccgctgggatgacgagtgggacaatgagaacagctcagcccgattattcgag
cgctctcgcatcaaagctctggcagacgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactctcacctgtcacgtgtgtcctgccggatcacggatctgtacatggac
ctgcgagatggacggatgctcatcaaactgctggaggttctgtcaggagagagactgccg
aagccaacgaagggtcgtatgcgaatccactgcctggagaacgtcgacaaggccttgcag
tttctgaaagaacagcgggttcacctggagaacatgggctctcatgatatcgtcgacggc
aatcacagactcacgctcggtcttatctggaccatcatcctccgtttccagatccaggac
atcagtgtggagacagaagacaataaagagaagcgttcagctaaggatgctctgctgcta
tggtgtcagatgaagaccgcaggctataccaacgtcaacatccacaacttcagcaccagc
tggagagacggcatggctttcaatgccctcattcacaaacacagaccggacctgatcgat
tttgacaaactgaagaagtccaatgctcactacaacctgcagaacgctttcaacctggcc
gaacagcatctgggtctcaccaaactgctggatgcagaagatatcagcgttgaccatccc
gatgagaaatctatcatcacttacgtcgtcacatactaccattatttctcaaagatgaag
gctttgaaggtggagggaaagcgtatcggaaaggtgctggataacgccattgagacggag
aagatgattgagaaatatgaatctctggcgtcagatcttctggagtggattgagcagacc
atcattatcctcaacaatcgcaagtttgcaaactctctggtgggagtccagcagcagctt
caggcctttaacacataccgcacggtggagaaacctcccaaattcactgagaaagggaac
ctggaggttcttctgttcaccatccagagcaaaatgagagccaacaatcagaaggtgtac
atgcccagagagggcaaactcatatctgacatcaacaaggcgtgggagcgcctggagaag
gccgagcacgagcgagagctggcgctgaggaccgagctcattcggcaggagaagttggaa
cagctcgctcgacgcttcgatcgcaaggccgccatgagagagacctggctcagcgagaac
caacgcctcgtctcccaggacaactttggatttgacctccaggctgttgaggcagctacc
aaaaaacacgaagccatcgagacggacattgcggcctatgaggagcgcgtgctggcggtt
gtcgccgtggcgaaggagctggaggcggagaactatcacgacatcaagcgtatcaccgct
cgtaaagataacgtcctgcgtctgtgggagtatctgctggaactcctgaaggctcgcaga
cagcggttggagatgaacctcggcctccagcgcgtcttccaggagatgctctacatcatg
gactggatggatgagatgaagatgttgcttctctctcaggattatgggaaacaccttctg
ggtgttgaagatctactacagaaacatgctttggtggaggccgacatcgccatacaggcc
gaccgcgtgcgagccgtcaacactaacgctcagaagtttgctgtggatgaggaaggctat
aagccctgtgaccctcaggtcattcgtgatcgtgtggctcacatggagttctgctaccag
gagctcacccaactggcggccgatcgtcacgctcgcctggaggaatcccgtcgcctctgg
aagttcttctgggagatggcagaggaagagggctggatccgtgagaaagagcagatccta
tcctcggacgactgcggtaaggatctgacgggtgccgtgcgtctgttgagtcaacaccgc
gccctcgaggacgaaatgagcggtcgggccggtcacctccagcacacggtgcgtgaaggt
caagccatggccgacgcgggccacttcggcgaggcaaagatccgcgagcgcatcgctgat
gtgcaggcacagtgggccgcactggaacagctggccgccgtgaggaaagctcgtctggag
gaggcctgcagtcttcaccagttccaggttgacgccgatgacgtggacgcctggaccctg
gatgccctccgaatcgtctccagcgccgacgtggggcacgatgaattctccactcaagct
atggtgaagaaacacaaggacgcgtccgccgaggtcgctagttacaggccggtgatcgac
gcacttcacgaacaggcccaagcactgcgacctgaacaggcgcaggccgcaaatgtcagc
gagcggctgtcaggcatcgaggagcgttataaggaggtgtccgagctgacccgactgagg
aaacaagccctgcaggacgccttggcacggtataagatgttcagcgaggcggacgcgtgt
gaactctggatcgatgagaaggaacagtggctgaacagcatggagatcccagagaaactc
gaggaccttgaggtcattcagcacaggtttgaaagtcttgaaccggaaatgaataaccag
gcatcacgtgtggcggtggtgaatcagatcgcccgacagctgatgcacagcggacacccc
agtgagaaagacatcaaagctcaacaagacaaactcaacaacagatggagtcagttccgt
gatctggtggaccagaagaaagaatccctaaactccgctttgggcgttcagaactaccac
ctcgactgcaatgagaccaaatcctggatccgtgagaagacgaaagttatcgagtccacc
caggagctgggcaacgacctgacgggcgtgatggccctccagcgcaaactcacgggcatg
gagcgcgacctggccgccattgaagctaaactgggcgatctccgcggtgaggccgaccgt
ctgggcgacgaacatcccgaccaggccaaagccatcacgggacgtctggcggaaatcaac
tcggtttgggaggagatgaaggaaacactgcgtaatcgtgaggcgtccctcggggaagcc
agcaaactgcagcagttcctcagggaactggacgatttccagtcctggctgtcccgaacg
cagacggccatcgcctctgaggacatggccaacacgctcgcagaggccgagaagttgctg
gcccagcacgagggcatcaagaacgaaatcaataactatgaagaggactatcagaagatg
agagacatgggtgagatggtgacccagggtcagacagactctcagtacatgttcctgaga
cagaggcttcaggctttggatacgggatggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtcgcagtctcacgcctaccagatcttcttgagagacaccaaacaggcc
gaggctttcctcaacaaccaggagtatgctttggcccacactgagatgcccaccacactg
gaaggggctgaagctgctattaagaaacaagaagacttcatgaccactatggacgccaac
gaggacaagatcaatagtgttgtagaggctggacggagactgactagtgatggaaacatc
aacgccgaacgcatccaagagagagcagcatcaatcgatgatcgacacaagaagaatcgt
gaggcggctgtggagctgctcatgagactgaaggacaacagagatctgcagaagttcctg
caggactgtcaggagctcaccctgtggatcaatgagaagatgttgacggcacaggacatg
tcgtacgatgaagctcgtaacctgcacagcaaatggctgaaacatcaagcgttcatggca
gaacttcagtccaacaaagaatggctggataaaatcgagaaggatggaaagcagctggtg
tctgagaagcccgagaccgactctgtagtgaaggagaagttatcgggactgcagaagatg
tggaccgagctggaatccaccacacagactaaagctcagtgtctgtttgacgccaacaaa
gccgagctgttcacgcagagctgcgcagatctggacaaatggctgcagggcctggaggga
caaatccaatccgacgactacggcaaagatctgaccagcgtcagcatccttctgaagaag
caacagattttggagaatcaggtggaggtgcgtcagagggaggtggatgaactacagtct
caagctcacgtgcttagacaggagggaaaagacacggatgaggtggacggacgccgggaa
gtggtggagcagaagttccaggagctgttggagccgctgataaagaggaagaagttcctc
atggcctctcgcgagatccatcagttcaaccgcgacgtcgaggacgagatcctctgggtt
gaggagaggatgcctctggctacatcaactgaccatggcaacaacttgcagaccgttcag
ctacttatcaagaagaaccagacacttcagaaggagatccagggtcaccagcggcgctgt
gatgacatcttcgagcgcagccagagcaccctggaagccgacagtccgaacgtggagggg
atccgagcacgtctggccgatctgcagcagctctggagtctgatcatgcaggagacggag
aagcgacacagccgtctggaggaggcacacaaagcccagcagtattactttgacgcggct
gaagctgaagcctggatgagcgaacaggaactttacatgatgtctgaggagaaggccaag
gatgagcagagttcagtggccatgttgaagaaacatcagatcttggagcaggcggtggag
gattacgcagagactgtacatcagctgtccaagaccagccgaggactggtggccgccaac
catcccgagagcgagaggatcggcatgcgtcagtcacaggtggataagctgtacgccgga
ctgaaggacctgtcagaagagaggagaggtaaactggaggagagattccgtctcttccag
ctgaaccgggaggtggatgacctggagcagtggatagccgagagagaagtcgtggccgga
tctcacgaactgggccaagattatgaacatgttactatgttgcaggaacgtttccgcgaa
tttgcccgagacactggaaacatcggtcaggagcgcgtggacggtgtgaaccgcatggcc
gatgaactcatcaacgccggtcacacagacgcagcgacggtggccgagtggaaagacggt
ttgaacgaggcctgggccgacctgctcgagctcatcgacacacgtacgcagatcctggcc
gcttcctacgagctgcacaaattctaccacgacgccaaggagattctgggccgcatcctg
gacaaacacaagaaacttccggaagagctgggacgtgaccagaacacggtggagaccctg
cagaggatgcacaccacctttgagcacgacattcaagcgctggggacgcaggtaagacaa
ctacaggaagacgccgtgcgtctgcagtcggcgtacgccggagacaaagccgacgacatc
cagaggagagagggagaggtgctggaggcatggcgcagtcttctggaggcctgcgagggc
cggagggcgcgactgctcgacaccggagacaaattccgcttcttcagcatggtgcgtgac
ctcatgctttggatggaggacgtcatccgtctcatcgagactcaggagaagcccagggac
gtgtcctctgtggagctcctcatgaacaaccatcagggcatcaaggctgaaatcgatgcc
cgaaacgacagcttcaccgcatgcatcgagctgggaaaatctctcctggcacgcaaacac
tacgcttcagaggagattaaagagaagttgcttcagttgacggacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcacgggacgcgggagtggcagaagcgtggctgctggggcaggagccgtatctgtccagc
agagagttgggacagagcgtggacgaggtggagaaactcatcaaacgacacgaagccttt
gagaaatcggctgcaacttgggaggagcgtttttcggcgctggaacgactgactacgttg
gagttattggaagtgagaagactgcaagaggaagaagagagaagaaggaagccacccaca
ccagatcctgcacaggacacagacgcacaacagcgagacggagagcagatcgctcagaac
ggacttccgtcagaccaggactcccctcgggatggggtggatggtgagatgaacggggtg
cctgagaaaagctcaaaggaggggagccccgtcccgtctcccaccgcagaaagacgagcc
aaaggcagccagtcgtccacgctgccggctaaaggccaggactccccgacggctcagctc
gagggattcttacatcgcaaacatgagtgggagggtcacaacaagaaagcgtccaatagg
tcttggcataacgtgtactgtgtcatcaataatcacgagatgggcttctacaaagataat
aagacggcgggtcagggcatcccgtatcacaatgagatccccatcggtctgaaagaggcc
gtctgtgaggtcgccgtcgactacaagaagaagaagcatgtttttaaactcagacttact
gatggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggattcaa
gccattcagaacgccggcagcgcttcttcatcctccgagaaaaccgagatcactcctagc
aaccagagcaccccggcgtccagccgcgcccaaaccctcccggcaaccgtcaccttgacg
accgagtccagccccggcaagcgtgaaaaagacaaagagaaggacaaagagaaacgcttc
agcctgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
